prot_E_fasciculatus_S2_contig9665.17672.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig9665.17672.1
Unique Nameprot_E_fasciculatus_S2_contig9665.17672.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length521
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9665.17672.1 vs. uniprot
Match: D8LDN9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDN9_ECTSI)

HSP 1 Score: 901 bits (2329), Expect = 0.000e+0
Identity = 431/522 (82.57%), Postives = 456/522 (87.36%), Query Frame = 0
Query:    1 MTGITAPCTCSVDGRSGLADTRYKGYSFTGCGAHVDYTLSTFEGGGYESTWCYVTSPPDCPGYSPYIPEGLKTDNTLPEWEADGAAWKECYDGYRCEAWWGGLEGSPDGEPVVLDAPLDWPDCCALCSGGGNDDGNGSGTNSTCVAWSFDPSTGSCQRMSTVEETSYDYSWGAWNYNSTVNGYPGYFEAPITDCWGRTQYDLCVNTNAALIIPGMIVAFISLCCMCLEGFCAPSKRAGLLWELAIEQPQSSRLVKAACVEVTCNRTVKSTGKGSTTIIYTYKGTFVTRDGALFVLPHPNPKLSGPKPSCRIEKRMLRVLHNTNRNPRADPSVTRRCETPDGLRAEFSKMVRAVPAKPAAGTNGEPFYRSHVQGRPDMPIARDAAADQRFDCILLVGMDQTA--PTKVLLVGILGEDRITCVDEEVLGASCADLCCASFCFVLGTIVLFIMCITLLTNEAAQNMAAWTFEGDHRVGAIVGLVLCTCVPLSLFVWKCRKSGKLLRSIRDCPLVAESDRVIDSRT 520
            MTGITAPCTCSVDG SGLADTRY+GYSFTGCGAHVDYTL+TFEGGGYE TWCYVTSPPDCPG SPYIPEG KTDNTLPEWEA GAAWKECYDGYRCEAWWGGLEGSPDGEPVVLDAPLDWPDCCALCSG G+       T STCVAWSFDPSTGSCQRMSTV E SYDYSWGAWN N+T++GYPGYFEAP+TDCWGR+QYDLCVNTNAA IIPG+IVAFISLCCM   GFCAPS RAGLL ELAIEQPQSSRLVK AC EV C +TVKSTGKG T I YTY GTFVTRDGA+F LP P  +    + S RIEKRML VLHNT RNPRADPS+ RRCETPDGLRAEFSKMVRAVP KP A  +G  FYRSHV G P++P+ RDAA D RFDCILLVG ++    PTKVLLVGILGEDRITCV E+VLGAS AD CCASFCFVL   +LFIMCITLLTNEAAQNMAAWTFEGDHRVGAI+GLVLCTCVPLSLFVWKCRKSGKLLRSIR+CPLVAESDRVI+SRT
Sbjct:    1 MTGITAPCTCSVDGVSGLADTRYQGYSFTGCGAHVDYTLNTFEGGGYERTWCYVTSPPDCPGESPYIPEGFKTDNTLPEWEALGAAWKECYDGYRCEAWWGGLEGSPDGEPVVLDAPLDWPDCCALCSGSGSXXXXXXXTTSTCVAWSFDPSTGSCQRMSTVAEPSYDYSWGAWNSNNTISGYPGYFEAPLTDCWGRSQYDLCVNTNAAFIIPGVIVAFISLCCMWASGFCAPSARAGLLRELAIEQPQSSRLVKVACAEVACTKTVKSTGKGGTKITYTYNGTFVTRDGAVFNLPPPTRRPKMHEASRRIEKRMLSVLHNTKRNPRADPSLARRCETPDGLRAEFSKMVRAVPRKPEASRSGGSFYRSHVLGHPNVPVERDAAVDHRFDCILLVGTEEPGRTPTKVLLVGILGEDRITCVGEDVLGASVADFCCASFCFVLAAALLFIMCITLLTNEAAQNMAAWTFEGDHRVGAIIGLVLCTCVPLSLFVWKCRKSGKLLRSIRECPLVAESDRVINSRT 522          
BLAST of mRNA_E_fasciculatus_S2_contig9665.17672.1 vs. uniprot
Match: A0A6H5KRC3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRC3_9PHAE)

HSP 1 Score: 474 bits (1220), Expect = 1.030e-161
Identity = 253/468 (54.06%), Postives = 295/468 (63.03%), Query Frame = 0
Query:   54 VTSPPDCPGYSPYIPEGLKTDNTLPEWEADGAAWKECYDGYRCEAWWGGLEGSPDGEPVVLDAPLDWPDCCALCSGGGNDDGNGSGTNSTCVAWSFDPSTGSCQRMSTVEETSYDYSWGAWNYNSTVNGYPGYFEAPITDCWGRTQYDLCVNTNAALIIPGMIVAFISLCCMCLEGFCAPSKRAGLLWELAIEQPQSSRLVKAACVEVTCNRTVKSTGKGSTTIIYTYKGTFVTRDGALFVLPHPNPKLSGPKPSCRIEKRMLRVLHNTNRNPRADPSVTRRC-ETPDGLRAEFSKMVRAVPAKPAAGTNGEPFYRSHVQGRPDMPIARDAAADQRFDCILLVGMDQTAPTKVLLVGILGEDRITCVDEEVLGASCADLCCASFCFVLGTIVLFIMCITLLTNEAAQNMAAWTFEGDHRVGAIVGLVLCTCVPLSLFVWKCRKSGKLLRSIRDCPLVAESDRVIDSRT 520
            VTSPPDCPG S YIPEG KTDNTLPEWE +GAAWKE +D  RC+AWWGGL GSP+GEPVVLDAPLDWPDCCALCSGGG+DDG  + T +TC AWSFDPSTGSCQRMS VE TS + +WGAW Y  TV GYPGYFEAPI DCW R +YDLCVN +  LI+PGM VAF S+ CM                                   V C +  + +GKG     YTYKGTF   DGALFVLP P    + P+ S +IEKRMLRVL+NTN NPRADP V  R  ++ D  + + S  +                            +  DA                    +VLLVGILGEDRITC+D E+LG+S     CASFC VL  ++L  MC+ LLTNEAAQ+MA WTFEGD+R+GA+VGL+L +CVPLS F W  R S KL R ++DCP VAESDRV+ SRT
Sbjct:   33 VTSPPDCPGDSLYIPEGFKTDNTLPEWEDEGAAWKE-WD--RCDAWWGGLGGSPNGEPVVLDAPLDWPDCCALCSGGGDDDG--ANTETTCAAWSFDPSTGSCQRMSAVESTSQNNTWGAWQYKGTVKGYPGYFEAPINDCWSRMKYDLCVNPSMGLIVPGMFVAFWSILCMYFP--------------------------------VGCQKLAQKSGKGGIKYFYTYKGTFAACDGALFVLPPPTRLSNAPRSSHKIEKRMLRVLYNTNLNPRADPGVASRAGDSCDKRKRQISNPI----------------------------VPHDA--------------------RVLLVGILGEDRITCIDHELLGSSSCCRSCASFCLVLAAVMLVTMCVALLTNEAAQHMAEWTFEGDYRIGAVVGLMLRSCVPLS-FAWNYRNSNKLFRLVKDCP-VAESDRVVHSRT 413          
BLAST of mRNA_E_fasciculatus_S2_contig9665.17672.1 vs. uniprot
Match: A0A6H5K6X7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6X7_9PHAE)

HSP 1 Score: 270 bits (689), Expect = 7.970e-85
Identity = 141/221 (63.80%), Postives = 152/221 (68.78%), Query Frame = 0
Query:   54 VTSPPDCPGYSPYIPEGLKTDNTLPEWEADGAAWKECYDGYRCEAWWGGLEGSPDGEPVVLDAPLDWPDCCALCSGGGNDDGNGSGTNSTCVAWSFDPSTGSCQRMSTVEETSYDYSWGAWNYNSTVNGYPGYFEAPITDCWGRTQYDLCVNTNAALIIPGMIVAFISLCCMCLEGFCAPSKRAGLLWELA--------IEQPQSSRLVKAACVEVTCNRT 266
            VTSPPD PG SPYIPEG KTDNTLP  EA+GAAWKECYDG RC+AWWGGLEGSPDGEPVVLDAPLDWPDCCALC+GGG++DG+GSGTNSTCVAWSFDPSTG CQRM TVEETSYDYSW  W  ++T+NG                                       L CM   GFCA S RAGLL ELA        IEQPQSSRLVKAACV+V  + T
Sbjct:   13 VTSPPDFPGESPYIPEGFKTDNTLPLREANGAAWKECYDGNRCDAWWGGLEGSPDGEPVVLDAPLDWPDCCALCNGGGDNDGDGSGTNSTCVAWSFDPSTGWCQRMPTVEETSYDYSWTTWQNSNTING---------------------------------------LMCMHCLGFCARSTRAGLLRELAVEQQQSSPIEQPQSSRLVKAACVKVRVHET 194          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9665.17672.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LDN9_ECTSI0.000e+082.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRC3_9PHAE1.030e-16154.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6X7_9PHAE7.970e-8563.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 228..430
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 208..227
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 473..491
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 492..520
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..207
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 454..472
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 431..453
NoneNo IPR availableTMHMMTMhelixcoord: 435..457
NoneNo IPR availableTMHMMTMhelixcoord: 472..491
NoneNo IPR availableTMHMMTMhelixcoord: 209..231

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9665contigE_fasciculatus_S2_contig9665:45..3817 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9665.17672.1mRNA_E_fasciculatus_S2_contig9665.17672.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig9665 45..3817 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig9665.17672.1 ID=prot_E_fasciculatus_S2_contig9665.17672.1|Name=mRNA_E_fasciculatus_S2_contig9665.17672.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=521bp
MTGITAPCTCSVDGRSGLADTRYKGYSFTGCGAHVDYTLSTFEGGGYEST
WCYVTSPPDCPGYSPYIPEGLKTDNTLPEWEADGAAWKECYDGYRCEAWW
GGLEGSPDGEPVVLDAPLDWPDCCALCSGGGNDDGNGSGTNSTCVAWSFD
PSTGSCQRMSTVEETSYDYSWGAWNYNSTVNGYPGYFEAPITDCWGRTQY
DLCVNTNAALIIPGMIVAFISLCCMCLEGFCAPSKRAGLLWELAIEQPQS
SRLVKAACVEVTCNRTVKSTGKGSTTIIYTYKGTFVTRDGALFVLPHPNP
KLSGPKPSCRIEKRMLRVLHNTNRNPRADPSVTRRCETPDGLRAEFSKMV
RAVPAKPAAGTNGEPFYRSHVQGRPDMPIARDAAADQRFDCILLVGMDQT
APTKVLLVGILGEDRITCVDEEVLGASCADLCCASFCFVLGTIVLFIMCI
TLLTNEAAQNMAAWTFEGDHRVGAIVGLVLCTCVPLSLFVWKCRKSGKLL
RSIRDCPLVAESDRVIDSRT*
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