prot_E_fasciculatus_S2_contig9648.17657.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig9648.17657.1
Unique Nameprot_E_fasciculatus_S2_contig9648.17657.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length219
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9648.17657.1 vs. uniprot
Match: D7G0C2_ECTSI (Histone deacetylase family protein, plastidal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0C2_ECTSI)

HSP 1 Score: 383 bits (983), Expect = 5.560e-131
Identity = 193/220 (87.73%), Postives = 201/220 (91.36%), Query Frame = 0
Query:    1 MKLSHVRLLAIGCSARAWHRSVPLPHSAVFSCGG-IRSSRRGNRCSTRNMSRGRRTPTAVGTGFDTALQGSPQDEVQERGGKGTIKVIYDEVFLKHRPPPGHPHPECPARVSTARNELDRFEGIEWATPSSLRSEKGRERTLAAIERVHNAEYLEEVRRVCAKGGGAADFDTYICPDTFEVCVAASSAWMDAAESAMGGSPAFALARPPGHHATAGVGMG 219
            MKLSHVRLLAIGCSARAWHRS PLP+SA FSCGG IR S RGNR ST +MSRGRR PTAVGTG DT LQGS QDEVQ R G+G +K+IYDEVFLKHRPPPGHPHPECPARVSTAR+ELDR EGIEWATPSSL+SEKGRERTLAAIERVHN EYLEEV RVCAKGGGAADFDTYICPDTFEVC+AASSAWMDA ESA GGSPAFALARPPGHHATAGVGMG
Sbjct:    1 MKLSHVRLLAIGCSARAWHRSAPLPNSAAFSCGGGIRFSWRGNRYST-SMSRGRRRPTAVGTGLDTELQGSQQDEVQNRDGEGKLKIIYDEVFLKHRPPPGHPHPECPARVSTARSELDRLEGIEWATPSSLQSEKGRERTLAAIERVHNPEYLEEVLRVCAKGGGAADFDTYICPDTFEVCIAASSAWMDAVESAAGGSPAFALARPPGHHATAGVGMG 219          
BLAST of mRNA_E_fasciculatus_S2_contig9648.17657.1 vs. uniprot
Match: A0A6H5JEW7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEW7_9PHAE)

HSP 1 Score: 285 bits (730), Expect = 3.110e-94
Identity = 143/171 (83.63%), Postives = 149/171 (87.13%), Query Frame = 0
Query:   49 MSRGRRTPTAVGTGFDTALQGSPQDEVQERGGKGTIKVIYDEVFLKHRPPPGHPHPECPARVSTARNELDRFEGIEWATPSSLRSEKGRERTLAAIERVHNAEYLEEVRRVCAKGGGAADFDTYICPDTFEVCVAASSAWMDAAESAMGGSPAFALARPPGHHATAGVGMG 219
            M RG   PTAVG         S QDEVQ RGG+G +K+IY EVFLKHRPPPGHPHPECPARVSTAR ELD+ EGIEWATPSSLRSEKGRER LAAIERVHN EYLEEVRRVCAKGGGAADFDTYICPDTFEVC+AA+SAWMDAAESA GGSPAFALARPPGHHATAGVGMG
Sbjct:    1 MPRGLPRPTAVG---------SQQDEVQNRGGEGKLKIIYGEVFLKHRPPPGHPHPECPARVSTARIELDQLEGIEWATPSSLRSEKGRERALAAIERVHNPEYLEEVRRVCAKGGGAADFDTYICPDTFEVCIAAASAWMDAAESAAGGSPAFALARPPGHHATAGVGMG 162          
BLAST of mRNA_E_fasciculatus_S2_contig9648.17657.1 vs. uniprot
Match: A0A7S2UT75_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UT75_9STRA)

HSP 1 Score: 130 bits (327), Expect = 6.540e-33
Identity = 62/139 (44.60%), Postives = 95/139 (68.35%), Query Frame = 0
Query:   82 GTIKVIYDEVFLKHRPPPGHPHPECPARVSTARNELDRFEGIEWATPSSLRSEKGRERTLAAIERVHNAEYLEEVRRVCAKGGGAADFDTYICPDTFEVCVAASSAWMDAAESAMG-GSPAFALARPPGHHATAGVGMG 219
            G +++IY + FL+H+    HP  ECP R+     +L   +GI+W TP+S  S++  +  L  I++VH+ +Y+EE++++  +GGG  D+DTY+  +T+EV V A+ AW+DA +SA+  G+PAFAL RPPGHHA  G GMG
Sbjct:   30 GQVRIIYSDKFLEHKDTTYHP--ECPDRLKWTVPKLKSIQGIDWRTPTSSYSKEREQLALEYIKKVHDPDYVEEIQKLSGQGGGRLDYDTYVNAETYEVAVLAACAWLDAVDSAVKEGTPAFALTRPPGHHALRGTGMG 166          
BLAST of mRNA_E_fasciculatus_S2_contig9648.17657.1 vs. uniprot
Match: A0A835Z0V1_9STRA (Hist_deacetyl domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0V1_9STRA)

HSP 1 Score: 116 bits (291), Expect = 2.020e-27
Identity = 61/138 (44.20%), Postives = 85/138 (61.59%), Query Frame = 0
Query:   84 IKVIYDEVFLKHRPPPGHPHPECPARVSTARNELDRFEGIEWATPSSLRSEKGR-ERTLAAIERVHNAEYLEEVRRVCAKGGGAADFDTYICPDTFEVCVAASSAWMDAAESAMG-GSPAFALARPPGHHATAGVGMG 219
            +KVIYDE   +H       H ECPAR + A + L    GI    P++   +    ++ + A+ RVH   Y+E++  +  +GGG  DFDTY+  DT++VCV A+SAW+DA +SA+  G+PAFAL RPPGHHAT    MG
Sbjct:   54 VKVIYDESHTRHAA--RSDHSECPARATVAADLLQGVAGIGMVAPAAASGDADALDKVMRALHRVHKDWYIEDIAAMSRRGGGNVDFDTYVTKDTYDVCVRATSAWLDAVDSAVTHGTPAFALTRPPGHHATPMAAMG 189          
BLAST of mRNA_E_fasciculatus_S2_contig9648.17657.1 vs. uniprot
Match: R7QI26_CHOCR (Hist_deacetyl domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI26_CHOCR)

HSP 1 Score: 115 bits (289), Expect = 6.360e-27
Identity = 66/146 (45.21%), Postives = 87/146 (59.59%), Query Frame = 0
Query:   84 IKVIYDEVFLKHRPPPGHPHPECPAR----VSTARNELDRFEGIEWATPSSLRSEKGRER---TLAAIERVHNAE-YLEEVRRVCAKGGGAADFDTYICPDTFEVCVAASSAWMDAAESAMGGSP--AFALARPPGHHATAGVGMG 219
            I V Y  VF KHRPPP   H ECPAR    VS  +   +    I+W TP  +      +R    +AAI+ +H    Y EE+ R+  +GGGA D DTYI P+T++V V A+SAWM+AA++ + G+   A+AL RPPGHHAT   G G
Sbjct:   65 IPVFYSPVFKKHRPPPNTRHAECPARLDACVSALKASPELAPLIDWRTPLPVSGPDNLDRHEAVMAAIKEIHTFPGYFEELERITKRGGGALDPDTYISPNTYQVAVLAASAWMEAADTVLNGTAKVAWALTRPPGHHATPASGSG 210          
BLAST of mRNA_E_fasciculatus_S2_contig9648.17657.1 vs. uniprot
Match: A0A7R9Y8J4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8J4_9STRA)

HSP 1 Score: 102 bits (255), Expect = 2.310e-22
Identity = 58/142 (40.85%), Postives = 79/142 (55.63%), Query Frame = 0
Query:   83 TIKVIYDEVFLKHRPPPGHPHPECPARVSTARNEL---DRFEGIEWATPSSLRSEKGRERTLAAIERVHNAEYLEEVRRVCAKGGGAADFDTYICPDTFEVCVAASSAWMDAAESAMGGS--PAFALARPPGHHATAGVGMG 219
            ++ V+Y    L HR P  HP  ECP RVS  R  L   D    +EW  P+   S +   R    I+ VH  EYL E++  C +GGG+ D DTY+   +F+  +AA++ W++A    +     P+FALARPPGHHAT   GMG
Sbjct:   39 SVGVVYTPKVLLHRAPAAHP--ECPERVSGIREHLLSQDAKVKLEWVEPALEASSEAMRRLRGVIDEVHWDEYLRELQLRCERGGGSIDHDTYLNEHSFDGALAATACWVEAVRRTLERQEGPSFALARPPGHHATRSQGMG 178          
BLAST of mRNA_E_fasciculatus_S2_contig9648.17657.1 vs. uniprot
Match: UPI00055AF1BD (histone deacetylase n=1 Tax=Myxosarcina sp. GI1 TaxID=1541065 RepID=UPI00055AF1BD)

HSP 1 Score: 100 bits (250), Expect = 5.880e-22
Identity = 53/140 (37.86%), Postives = 83/140 (59.29%), Query Frame = 0
Query:   84 IKVIYDEVFLKHRPPPGHPHPECPARVSTARNELDRF---EGIEWATPSSLRSEKGRERTLAAIERVHNAEYLEEVRRVCAKGGGAADFDTYICPDTFEVCVAASSAWMDAAESAMGG-SPAFALARPPGHHATAGVGMG 219
            + VIY   FL+H    G+ HPECPAR++     L +    + +EW +P+ + + +     L+ + ++H A ++E ++ +  KGGG  D DT +   ++EV + A +AW+D  +  +   SPAF LARPPGHHATA  GMG
Sbjct:    2 LSVIYSPEFLEHDT--GYAHPECPARLTAIAEALQQVSWQDKLEWLSPTPIENRE----VLSWVRQIHTAAHIERIKLISEKGGGYLDGDTILSARSYEVALLAVNAWLDGVDWVLDKHSPAFVLARPPGHHATAKTGMG 135          
BLAST of mRNA_E_fasciculatus_S2_contig9648.17657.1 vs. uniprot
Match: A0A2V3J8J3_9FLOR (Hist_deacetyl domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J8J3_9FLOR)

HSP 1 Score: 100 bits (249), Expect = 2.010e-21
Identity = 63/149 (42.28%), Postives = 83/149 (55.70%), Query Frame = 0
Query:   77 ERGGKGTIKVIYDEVFLKHRPPPGHPHPECPARVS---TARNELDRFEGI-EWATPSSLRSEKGRERT-LAAIERVHNAE-YLEEVRRVCAKGGGAADFDTYICPDTFEVCVAASSAWMDAAESAMGGSPAFALARPPGHHATAGVGMG 219
            ER  +  + VIY  VF  HRP     HPECP R+    TA  E D+   + +W  P  +  +  R +  + A+  VH  E YL+E+++VC K G   D DTY+   +FEV + A SAWM A + A     A+ALARPPGHHAT   GMG
Sbjct:   44 ERSAERRMPVIYSPVFKDHRPK--RVHPECPERLDACVTALKENDQLSPLLDWLEPEQVPGDSERRKNVMEAVRSVHRFEGYLDELQQVC-KAGSGLDPDTYVSKQSFEVALLAVSAWMQAVDLACEQRTAWALARPPGHHATPASGMG 189          
BLAST of mRNA_E_fasciculatus_S2_contig9648.17657.1 vs. uniprot
Match: W7TNA0_9STRA (Histone deacetylase superfamily n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNA0_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.070e-20
Identity = 61/158 (38.61%), Postives = 83/158 (52.53%), Query Frame = 0
Query:   84 IKVIYDEVFLKHRPPPGHPHPECPARVSTARNELDRFEGIEWATPSSLRSEKGRERTLAAIERVHNAEYLEEVRRVCAKGGGAADFDTYICPDTFEVCVAASSAWMDAAESAMGGS----------------------PAFALARPPGHHATAGVGMG 219
            + VIY E FL+H+   G+ HPE P RVS     L    G+    P+  + E      LA I +VH+ EY+EEV+ +  +GGG+ D DTY+   T++VC+ A++AWMD  E  + G                       P+FAL RPPGHHA AG  MG
Sbjct:   47 VNVIYSERFLEHKAR-GY-HPENPLRVSVPAQLLKHTPGVRLYPPAVSKEE-----ALAVILKVHDVEYVEEVKALSERGGGSMDADTYVNSATYDVCLLAAAAWMDCVERTLLGEMEEVPGENGDNLTLRVHNGIRRPSFALTRPPGHHALAGQAMG 197          
BLAST of mRNA_E_fasciculatus_S2_contig9648.17657.1 vs. uniprot
Match: A0A1Z4JJG7_LEPBY (Putative deacetylase n=2 Tax=Leptolyngbya TaxID=47251 RepID=A0A1Z4JJG7_LEPBY)

HSP 1 Score: 96.3 bits (238), Expect = 3.040e-20
Identity = 53/136 (38.97%), Postives = 75/136 (55.15%), Query Frame = 0
Query:   86 VIYDEVFLKHRPPPGHPHPECPARVSTARNELDRF--EGIEWATPSSLRSEKGRERTLAAIERVHNAEYLEEVRRVCAKGGGAADFDTYICPDTFEVCVAASSAWMDAAESAMGGSPAFALARPPGHHATAGVGMG 219
            VIY + FL H    GH HPE   R++  +  L       I W  P+ + +       L +++ VH   YL++VR    +GGG  D +T I P ++EV + A +AW+D  E A+ G P F +ARPPGHHA A +GMG
Sbjct:    4 VIYSDEFLLHDT--GHFHPENSGRLTAIQAALKATFPSQIHWQLPTPVETRS----PLLSVQAVHTQHYLDQVRLTANRGGGFVDGETVISPRSYEVALLAVNAWIDGVEMALSGQPCFVMARPPGHHAIADLGMG 133          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9648.17657.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0C2_ECTSI5.560e-13187.73Histone deacetylase family protein, plastidal n=1 ... [more]
A0A6H5JEW7_9PHAE3.110e-9483.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2UT75_9STRA6.540e-3344.60Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835Z0V1_9STRA2.020e-2744.20Hist_deacetyl domain-containing protein n=1 Tax=Tr... [more]
R7QI26_CHOCR6.360e-2745.21Hist_deacetyl domain-containing protein n=1 Tax=Ch... [more]
A0A7R9Y8J4_9STRA2.310e-2240.85Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
UPI00055AF1BD5.880e-2237.86histone deacetylase n=1 Tax=Myxosarcina sp. GI1 Ta... [more]
A0A2V3J8J3_9FLOR2.010e-2142.28Hist_deacetyl domain-containing protein n=1 Tax=Gr... [more]
W7TNA0_9STRA1.070e-2038.61Histone deacetylase superfamily n=1 Tax=Nannochlor... [more]
A0A1Z4JJG7_LEPBY3.040e-2038.97Putative deacetylase n=2 Tax=Leptolyngbya TaxID=47... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037138Histone deacetylase domain superfamilyGENE3D3.40.800.20coord: 78..219
e-value: 1.3E-22
score: 82.2
IPR023801Histone deacetylase domainPFAMPF00850Hist_deacetylcoord: 103..219
e-value: 4.4E-12
score: 46.1
NoneNo IPR availablePANTHERPTHR45634FAMILY NOT NAMEDcoord: 73..219
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..219
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..32
score: 6.0
IPR023696Ureohydrolase domain superfamilySUPERFAMILY52768Arginase/deacetylasecoord: 83..219

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9648contigE_fasciculatus_S2_contig9648:1635..5607 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9648.17657.1mRNA_E_fasciculatus_S2_contig9648.17657.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig9648 1635..5607 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig9648.17657.1 ID=prot_E_fasciculatus_S2_contig9648.17657.1|Name=mRNA_E_fasciculatus_S2_contig9648.17657.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=219bp
MKLSHVRLLAIGCSARAWHRSVPLPHSAVFSCGGIRSSRRGNRCSTRNMS
RGRRTPTAVGTGFDTALQGSPQDEVQERGGKGTIKVIYDEVFLKHRPPPG
HPHPECPARVSTARNELDRFEGIEWATPSSLRSEKGRERTLAAIERVHNA
EYLEEVRRVCAKGGGAADFDTYICPDTFEVCVAASSAWMDAAESAMGGSP
AFALARPPGHHATAGVGMG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023696Ureohydrolase_dom_sf
IPR023801His_deacetylse_dom
IPR037138His_deacetylse_dom_sf