prot_E_fasciculatus_S2_contig9616.17629.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig9616.17629.1
Unique Nameprot_E_fasciculatus_S2_contig9616.17629.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length93
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig9616.17629.1 vs. uniprot
Match: D8LD70_ECTSI (Condensin complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD70_ECTSI)

HSP 1 Score: 170 bits (430), Expect = 2.910e-47
Identity = 83/93 (89.25%), Postives = 86/93 (92.47%), Query Frame = 0 
Query:    1 IVNDDYAFYDTGALAKAAATSSNNNWAGASHWKFVGVKKKRPTRNKRGQGDGGMGADGEPMVDEEGNELDTGGGVGGRKARGKRRPPAIDFDS 93
            IVNDDYAFYDTGALA AAATSSNN WAGASHWKFVGVKKKRP RNKRGQG GGMG DGEPMVDE+GNELD+G  VGGRKARGKRRPPAIDFD+
Sbjct:  411 IVNDDYAFYDTGALAAAAATSSNNTWAGASHWKFVGVKKKRPARNKRGQGGGGMGPDGEPMVDEDGNELDSGDAVGGRKARGKRRPPAIDFDA 503
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BLAST of mRNA_E_fasciculatus_S2_contig9616.17629.1 vs. uniprot
Match: A0A6H5K552_9PHAE (Condensin complex subunit 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K552_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 4.670e-13
Identity = 34/40 (85.00%), Postives = 37/40 (92.50%), Query Frame = 0 
Query:   54 MGADGEPMVDEEGNELDTGGGVGGRKARGKRRPPAIDFDS 93
            MG DGEP+VDE+GNELD GG VGGRKARGKRRPPAIDFD+
Sbjct:    1 MGPDGEPIVDEDGNELDAGGAVGGRKARGKRRPPAIDFDA 40
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9616.17629.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LD70_ECTSI2.910e-4789.25Condensin complex subunit 2 n=1 Tax=Ectocarpus sil... [more]
A0A6H5K552_9PHAE4.670e-1385.00Condensin complex subunit 2 n=1 Tax=Ectocarpus sp.... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9616contigE_fasciculatus_S2_contig9616:4045..5006 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9616.17629.1mRNA_E_fasciculatus_S2_contig9616.17629.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig9616 4045..5006 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig9616.17629.1 ID=prot_E_fasciculatus_S2_contig9616.17629.1|Name=mRNA_E_fasciculatus_S2_contig9616.17629.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=93bp
IVNDDYAFYDTGALAKAAATSSNNNWAGASHWKFVGVKKKRPTRNKRGQG
DGGMGADGEPMVDEEGNELDTGGGVGGRKARGKRRPPAIDFDS
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