prot_E_fasciculatus_S2_contig9551.17568.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig9551.17568.1
Unique Nameprot_E_fasciculatus_S2_contig9551.17568.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length65
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig9551.17568.1 vs. uniprot
Match: D8LG69_ECTSI (Glutaminyl-tRNA synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG69_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 1.800e-20
Identity = 54/65 (83.08%), Postives = 55/65 (84.62%), Query Frame = 0 
Query:    1 MRSACGHARRRPRRLFSSVTADASLHSAPSSGLSGLSLAEASRKVQEGDVRPSELAEACIRQMER 65
            MRSACG ARRR RR FSSVTADASLHS       GLSLAEASRKVQEGDVRPSELAEACI+QMER
Sbjct:    1 MRSACGQARRRQRRFFSSVTADASLHS-------GLSLAEASRKVQEGDVRPSELAEACIKQMER 58
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9551.17568.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LG69_ECTSI1.800e-2083.08Glutaminyl-tRNA synthase n=1 Tax=Ectocarpus silicu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..65
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..39
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9551contigE_fasciculatus_S2_contig9551:4099..5155 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9551.17568.1mRNA_E_fasciculatus_S2_contig9551.17568.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig9551 4092..5155 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig9551.17568.1 ID=prot_E_fasciculatus_S2_contig9551.17568.1|Name=mRNA_E_fasciculatus_S2_contig9551.17568.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=65bp
MRSACGHARRRPRRLFSSVTADASLHSAPSSGLSGLSLAEASRKVQEGDV
RPSELAEACIRQMER
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