prot_E_fasciculatus_S2_contig9522.17550.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig9522.17550.1
Unique Nameprot_E_fasciculatus_S2_contig9522.17550.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length163
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9522.17550.1 vs. uniprot
Match: D7FQV0_ECTSI (TPR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV0_ECTSI)

HSP 1 Score: 234 bits (598), Expect = 4.050e-73
Identity = 139/164 (84.76%), Postives = 146/164 (89.02%), Query Frame = 0 
Query:    1 MASSPLSLPPSSRQSAAMRLVLLTLVLCCPLGWSFQQIGSPAFTRRGRVVANPTSSGSSRKMKNVCGALRSTSPRSSRTNNLISSRGLCGVDEVASEPLLALKDVVAGLVAAAFVLAADPGTALADTAMPAVSVLPSGSI-EATATSATSAEVAEVVPTIKLEG 163
            MA SPLSLPPSSR+SAAMRLV+LTLVLCCPLGWSFQ IGSPAFTRRGR V NPTSSG++   KNVC ALRSTSP  +RTN  ISSRGLCG DEVASEPLLALKDV+AGLVAAAFVLAADPGTALADTAMPA S LPSGS+ EATATS TSAEV EVVPTIKLEG
Sbjct:   11 MARSPLSLPPSSRRSAAMRLVVLTLVLCCPLGWSFQ-IGSPAFTRRGRSVTNPTSSGNT---KNVCEALRSTSPWPNRTNTRISSRGLCGADEVASEPLLALKDVLAGLVAAAFVLAADPGTALADTAMPAASGLPSGSVVEATATSTTSAEVQEVVPTIKLEG 170
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9522.17550.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQV0_ECTSI4.050e-7384.76TPR domain-containing protein n=1 Tax=Ectocarpus s... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 20..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 30..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..163
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..34
score: 0.685

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9522contigE_fasciculatus_S2_contig9522:3973..5931 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9522.17550.1mRNA_E_fasciculatus_S2_contig9522.17550.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig9522 3946..5931 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig9522.17550.1 ID=prot_E_fasciculatus_S2_contig9522.17550.1|Name=mRNA_E_fasciculatus_S2_contig9522.17550.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=163bp
MASSPLSLPPSSRQSAAMRLVLLTLVLCCPLGWSFQQIGSPAFTRRGRVV
ANPTSSGSSRKMKNVCGALRSTSPRSSRTNNLISSRGLCGVDEVASEPLL
ALKDVVAGLVAAAFVLAADPGTALADTAMPAVSVLPSGSIEATATSATSA
EVAEVVPTIKLEG
back to top