prot_E_fasciculatus_S2_contig95.17532.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig95.17532.1
Unique Name	prot_E_fasciculatus_S2_contig95.17532.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	112

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig95.17532.1 vs. uniprot
Match: D8LH89_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH89_ECTSI)

HSP 1 Score: 199 bits (505), Expect = 3.170e-64
Identity = 104/111 (93.69%), Postives = 108/111 (97.30%), Query Frame = 0

Query:    1 MAPKLFAVLLALYCACASAFIAPSAVKAGSFAAPAVRATSMVAPKMTMGLEQIADVLPLVPTEAHNAGFEMANNPLLLSVTAESFGGLIGPISGCLAVAIFIVVMAPPRVD 111
            MAPKLFAVL ALYCACASAFIAPSAVK+GSFA PAVRATSMVAPKMTMGLEQIADVLPLVP+EAHNAGFEMANNPLLLSV+A+SFGGLIGPI GCLAVAIFIVVMAPPRVD
Sbjct:    1 MAPKLFAVLFALYCACASAFIAPSAVKSGSFATPAVRATSMVAPKMTMGLEQIADVLPLVPSEAHNAGFEMANNPLLLSVSADSFGGLIGPIGGCLAVAIFIVVMAPPRVD 111

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig95.17532.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig95.17532.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LH89_ECTSI	3.170e-64	93.69	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 29..84
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..28
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 85..106
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 5..16
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..28
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 107..111
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..4
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..19 score: 0.834
None	No IPR available	TMHMM	TMhelix		coord: 84..106
None	No IPR available	TMHMM	TMhelix		coord: 5..22

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig95	contig	E_fasciculatus_S2_contig95:24653..28097 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig95.17532.1	mRNA_E_fasciculatus_S2_contig95.17532.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig95 24653..28097 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig95.17532.1 ID=prot_E_fasciculatus_S2_contig95.17532.1|Name=mRNA_E_fasciculatus_S2_contig95.17532.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=112bp
MAPKLFAVLLALYCACASAFIAPSAVKAGSFAAPAVRATSMVAPKMTMGL
EQIADVLPLVPTEAHNAGFEMANNPLLLSVTAESFGGLIGPISGCLAVAI
FIVVMAPPRVD*