prot_E_fasciculatus_S2_contig9433.17473.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig9433.17473.1
Unique Nameprot_E_fasciculatus_S2_contig9433.17473.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length80
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9433.17473.1 vs. uniprot
Match: D8LK86_ECTSI (Harp (Smarcal1)-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK86_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 2.680e-43
Identity = 77/80 (96.25%), Postives = 77/80 (96.25%), Query Frame = 0
Query:    1 QVNCLRFAIRKKGKLLLGDEMGLGKTLQALAVACAYREDWPVLVVAPSSLKDNWRNEAMKWVPGLTKENIQIVRDAKEGV 80
            QV CLRFAIRKKGKLLLGDEMGLGKTLQALAVACAYREDWPVLVVAPSSLKDNWRNEAMKWVPGLTKE IQIVRDAK GV
Sbjct:  120 QVECLRFAIRKKGKLLLGDEMGLGKTLQALAVACAYREDWPVLVVAPSSLKDNWRNEAMKWVPGLTKEAIQIVRDAKMGV 199          
BLAST of mRNA_E_fasciculatus_S2_contig9433.17473.1 vs. uniprot
Match: A0A7S3SNX3_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3SNX3_9SPIT)

HSP 1 Score: 92.4 bits (228), Expect = 1.570e-22
Identity = 33/72 (45.83%), Postives = 58/72 (80.56%), Query Frame = 0
Query:    7 FAIRKKGKLLLGDEMGLGKTLQALAVACAYREDWPVLVVAPSSLKDNWRNEAMKWVPGLTKENIQIVRDAKE 78
            FA+R  G++LLGD+MGLGKT+QA+A+ CA+R+DWPVL+V P+S++  W +E  +W+PG+  + + +++ +++
Sbjct:    4 FAVRHGGRILLGDDMGLGKTIQAIAICCAFRQDWPVLIVVPNSVRFVWADELERWIPGMGPKGVNVIQSSQD 75          
BLAST of mRNA_E_fasciculatus_S2_contig9433.17473.1 vs. uniprot
Match: UPI000742A16C (DNA annealing helicase and endonuclease ZRANB3-like n=1 Tax=Cyprinodon variegatus TaxID=28743 RepID=UPI000742A16C)

HSP 1 Score: 89.7 bits (221), Expect = 1.670e-21
Identity = 38/71 (53.52%), Postives = 53/71 (74.65%), Query Frame = 0
Query:    5 LRFAIRKKGKLLLGDEMGLGKTLQALAVACAYREDWPVLVVAPSSLKDNWRNEAMKWVPGLTKENIQIVRD 75
            + FA+ K G+ ++ DEMGLGKT+QA+AVACAY++DWP+LVV PSSLK  W  E  +W+P L   +I +V +
Sbjct:   38 VEFALSKSGRCMIADEMGLGKTVQAIAVACAYKQDWPLLVVVPSSLKYPWIEELERWIPELQPTDINLVEN 108          
BLAST of mRNA_E_fasciculatus_S2_contig9433.17473.1 vs. uniprot
Match: A0A1R2CQ71_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CQ71_9CILI)

HSP 1 Score: 95.5 bits (236), Expect = 3.630e-21
Identity = 40/77 (51.95%), Postives = 59/77 (76.62%), Query Frame = 0
Query:    1 QVNCLRFAIRKKGKLLLGDEMGLGKTLQALAVACAYREDWPVLVVAPSSLKDNWRNEAMKWVPGLTKENIQIVRDAK 77
            Q+  + FA+   G+ L+GDEMG+GKT+QA+A A AY ++WPVLV+ P+S+K NWR+E +KWVPGL K++  +V+  K
Sbjct:  195 QIEGVNFALAHFGRALIGDEMGVGKTIQAIAAAYAYVDEWPVLVICPASIKLNWRDEFLKWVPGLEKKDFYVVKSKK 271          
BLAST of mRNA_E_fasciculatus_S2_contig9433.17473.1 vs. uniprot
Match: A0A3B3SJH1_9TELE (Zinc finger RANBP2-type containing 3 n=4 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3SJH1_9TELE)

HSP 1 Score: 95.5 bits (236), Expect = 3.690e-21
Identity = 41/71 (57.75%), Postives = 55/71 (77.46%), Query Frame = 0
Query:    5 LRFAIRKKGKLLLGDEMGLGKTLQALAVACAYREDWPVLVVAPSSLKDNWRNEAMKWVPGLTKENIQIVRD 75
            +RFA+ + G+ ++ DEMGLGKTLQA+AVACAYR+DWP+L+V PSSLK  W  E  KW+P L  E+I +V +
Sbjct:   41 VRFALSRDGRCMIADEMGLGKTLQAIAVACAYRQDWPLLIVVPSSLKYPWIEELEKWIPELDPEDINLVEN 111          
BLAST of mRNA_E_fasciculatus_S2_contig9433.17473.1 vs. uniprot
Match: A0A2P6NRC9_9EUKA (DNA annealing helicase and endonuclease ZRANB3-like n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NRC9_9EUKA)

HSP 1 Score: 95.1 bits (235), Expect = 5.040e-21
Identity = 38/76 (50.00%), Postives = 59/76 (77.63%), Query Frame = 0
Query:    5 LRFAIRKKGKLLLGDEMGLGKTLQALAVACAYREDWPVLVVAPSSLKDNWRNEAMKWVPGLTKENIQIVRDAKEGV 80
            L+F I++KG+ L+ DE GLGKT+QA++++  Y+EDWPVLV  P+SL+D+WRNE ++W+P L + N+ IV + K  +
Sbjct:  406 LKFGIQQKGRCLIADEPGLGKTIQAISISTYYKEDWPVLVACPASLRDHWRNEYLRWIPELHESNVVIVDNGKRQI 481          
BLAST of mRNA_E_fasciculatus_S2_contig9433.17473.1 vs. uniprot
Match: L1JAD3_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JAD3_GUITC)

HSP 1 Score: 94.7 bits (234), Expect = 5.250e-21
Identity = 37/68 (54.41%), Postives = 57/68 (83.82%), Query Frame = 0
Query:    5 LRFAIRKKGKLLLGDEMGLGKTLQALAVACAYREDWPVLVVAPSSLKDNWRNEAMKWVPGLTKENIQI 72
            +RFA+++KG++L+GDEMGLGKTLQALAVA AY+ +WP+L++ PSSL+ NW  E  +W+ G+ +E +++
Sbjct:   25 VRFALKRKGRVLIGDEMGLGKTLQALAVAAAYKREWPLLIICPSSLRLNWAQECSRWLEGMKEEPLEV 92          
BLAST of mRNA_E_fasciculatus_S2_contig9433.17473.1 vs. uniprot
Match: A0A7S0M042_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M042_9CRYP)

HSP 1 Score: 87.0 bits (214), Expect = 1.430e-20
Identity = 39/71 (54.93%), Postives = 57/71 (80.28%), Query Frame = 0
Query:   12 KGKLLLGDEMGLGKTLQALAVACAYREDWPVLVVAPSSLKDNWRNEAMKWVPGLTKENIQIVR---DAKEG 79
            +G++L+GDEMGLGKTLQA+AV+  YREDWP+LVVAPS+L+ +WR E ++W+P L + ++ +V    DA +G
Sbjct:    2 EGRVLIGDEMGLGKTLQAIAVSRIYREDWPLLVVAPSALRLSWRQELLRWLPELGEGDVNVVMTGADALDG 72          
BLAST of mRNA_E_fasciculatus_S2_contig9433.17473.1 vs. uniprot
Match: UPI0006D8E33F (DNA annealing helicase and endonuclease ZRANB3-like n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=UPI0006D8E33F)

HSP 1 Score: 90.9 bits (224), Expect = 2.050e-20
Identity = 37/71 (52.11%), Postives = 53/71 (74.65%), Query Frame = 0
Query:    5 LRFAIRKKGKLLLGDEMGLGKTLQALAVACAYREDWPVLVVAPSSLKDNWRNEAMKWVPGLTKENIQIVRD 75
            +RFA+ K G+ ++ DEMGLGKT+QA+AVAC YRE+WP+L++ PSSLK  W  E  KWVP L  ++  ++ +
Sbjct:   44 VRFALEKAGRCMIADEMGLGKTIQAIAVACFYREEWPLLIIVPSSLKYPWIEEMEKWVPELNPDDFNLIEN 114          
BLAST of mRNA_E_fasciculatus_S2_contig9433.17473.1 vs. uniprot
Match: L8GX54_ACACA (Helicase, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GX54_ACACA)

HSP 1 Score: 92.8 bits (229), Expect = 3.240e-20
Identity = 38/72 (52.78%), Postives = 55/72 (76.39%), Query Frame = 0
Query:    7 FAIRKKGKLLLGDEMGLGKTLQALAVACAYREDWPVLVVAPSSLKDNWRNEAMKWVPGLTKENIQIVRDAKE 78
            FA+++ G+ L+ DEMGLGKTLQA+A+A  Y+EDWPVLVVAPSS++  W +   KW+PGL  + I+++   K+
Sbjct:  375 FALQRNGRALIADEMGLGKTLQAIAIAAYYKEDWPVLVVAPSSVRVQWADNFEKWIPGLRPDQIKVIMKTKD 446          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9433.17473.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK86_ECTSI2.680e-4396.25Harp (Smarcal1)-related n=1 Tax=Ectocarpus silicul... [more]
A0A7S3SNX3_9SPIT1.570e-2245.83Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
UPI000742A16C1.670e-2153.52DNA annealing helicase and endonuclease ZRANB3-lik... [more]
A0A1R2CQ71_9CILI3.630e-2151.95Uncharacterized protein n=1 Tax=Stentor coeruleus ... [more]
A0A3B3SJH1_9TELE3.690e-2157.75Zinc finger RANBP2-type containing 3 n=4 Tax=Param... [more]
A0A2P6NRC9_9EUKA5.040e-2150.00DNA annealing helicase and endonuclease ZRANB3-lik... [more]
L1JAD3_GUITC5.250e-2154.41Uncharacterized protein (Fragment) n=1 Tax=Guillar... [more]
A0A7S0M042_9CRYP1.430e-2054.93Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
UPI0006D8E33F2.050e-2052.11DNA annealing helicase and endonuclease ZRANB3-lik... [more]
L8GX54_ACACA3.240e-2052.78Helicase, putative n=1 Tax=Acanthamoeba castellani... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 16..66
e-value: 1.4E-10
score: 40.4
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 1..78
e-value: 3.5E-18
score: 67.3
NoneNo IPR availablePANTHERPTHR45766FAMILY NOT NAMEDcoord: 1..75
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9433contigE_fasciculatus_S2_contig9433:469..1863 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9433.17473.1mRNA_E_fasciculatus_S2_contig9433.17473.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig9433 469..1865 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig9433.17473.1 ID=prot_E_fasciculatus_S2_contig9433.17473.1|Name=mRNA_E_fasciculatus_S2_contig9433.17473.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=80bp
QVNCLRFAIRKKGKLLLGDEMGLGKTLQALAVACAYREDWPVLVVAPSSL
KDNWRNEAMKWVPGLTKENIQIVRDAKEGV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR038718SNF2-like_sf
IPR000330SNF2_N