prot_E_fasciculatus_S2_contig933.17389.1 (polypeptide) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig933.17389.1 vs. uniprot
Match: D7G5C0_ECTSI (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5C0_ECTSI) HSP 1 Score: 172 bits (437), Expect = 4.790e-53 Identity = 85/89 (95.51%), Postives = 85/89 (95.51%), Query Frame = 0
Query: 1 MAAVGVPIKLLHEGEGHGVTVEMKNGEIYRGHLNEAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIKLVVLPDVLKNAPVNSPTPK 89
MAAVGVPIKLLHEGEGHGVTVEMKNGEIYRGHLNEAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIKLVVLPDVLKNAPV P K
Sbjct: 1 MAAVGVPIKLLHEGEGHGVTVEMKNGEIYRGHLNEAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIKLVVLPDVLKNAPVFKPVQK 89
BLAST of mRNA_E_fasciculatus_S2_contig933.17389.1 vs. uniprot
Match: A0A835ZED0_9STRA (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZED0_9STRA) HSP 1 Score: 142 bits (358), Expect = 5.560e-41 Identity = 68/81 (83.95%), Postives = 74/81 (91.36%), Query Frame = 0
Query: 3 AVGVPIKLLHEGEGHGVTVEMKNGEIYRGHLNEAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIKLVVLPDVLKNAPV 83
AVGVPIKLLHEGEGH +T+EMKNGEIYRG L EAEDTMN F+T VTMT RDGRVSKLEQVYLRGSHIK ++LPD+LKNAPV
Sbjct: 6 AVGVPIKLLHEGEGHVITIEMKNGEIYRGRLMEAEDTMNSFITEVTMTARDGRVSKLEQVYLRGSHIKFIILPDLLKNAPV 86
BLAST of mRNA_E_fasciculatus_S2_contig933.17389.1 vs. uniprot
Match: A0A7S2S181_9STRA (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S181_9STRA) HSP 1 Score: 130 bits (327), Expect = 2.580e-36 Identity = 57/79 (72.15%), Postives = 72/79 (91.14%), Query Frame = 0
Query: 4 VGVPIKLLHEGEGHGVTVEMKNGEIYRGHLNEAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIKLVVLPDVLKNAP 82
+GVPI++LHEGEGH ++VE++NGEIYRG L EAEDTMNCF+ VTMT RDGRVSKLEQVY+RGS +KL++LP+VLK++P
Sbjct: 6 IGVPIRILHEGEGHTISVELRNGEIYRGTLKEAEDTMNCFLENVTMTARDGRVSKLEQVYIRGSQVKLIILPEVLKHSP 84
BLAST of mRNA_E_fasciculatus_S2_contig933.17389.1 vs. uniprot
Match: A0A6S9H3G1_HETAK (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9H3G1_HETAK) HSP 1 Score: 129 bits (324), Expect = 6.920e-36 Identity = 58/80 (72.50%), Postives = 71/80 (88.75%), Query Frame = 0
Query: 4 VGVPIKLLHEGEGHGVTVEMKNGEIYRGHLNEAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIKLVVLPDVLKNAPV 83
+GVP+KLLHE EGH VT E+KNGEIYRG L+EAEDTMNC M+ VT T R+G+VSKLE VY+RGSH+KL++LPD+L+NAPV
Sbjct: 6 IGVPVKLLHEAEGHVVTAELKNGEIYRGMLDEAEDTMNCAMSNVTFTARNGKVSKLESVYIRGSHVKLLILPDMLRNAPV 85
BLAST of mRNA_E_fasciculatus_S2_contig933.17389.1 vs. uniprot
Match: K3WSP0_GLOUD (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSP0_GLOUD) HSP 1 Score: 127 bits (319), Expect = 4.220e-35 Identity = 57/82 (69.51%), Postives = 72/82 (87.80%), Query Frame = 0
Query: 4 VGVPIKLLHEGEGHGVTVEMKNGEIYRGHLNEAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIKLVVLPDVLKNAPVNS 85
VGVPI LLHEGEG VT+E+KNGEIYRGHL E+ED+MNC ++ V +T RDG+ +KLEQVY+RGSHIKL++LPD+LKN+P+ S
Sbjct: 5 VGVPIALLHEGEGRNVTIELKNGEIYRGHLEESEDSMNCQLSNVVLTQRDGQKAKLEQVYVRGSHIKLIILPDILKNSPLFS 86
BLAST of mRNA_E_fasciculatus_S2_contig933.17389.1 vs. uniprot
Match: A0A5D6XZW3_9STRA (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZW3_9STRA) HSP 1 Score: 126 bits (317), Expect = 1.110e-34 Identity = 60/81 (74.07%), Postives = 70/81 (86.42%), Query Frame = 0
Query: 3 AVGVPIKLLHEGEGHGVTVEMKNGEIYRGHLNEAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIKLVVLPDVLKNAPV 83
+VGVPI LLHEGEG VTVE+KNGEIYRGHL E+ED+MNC M V +T RDG+ KLEQVY+RGSHIKLV+LPDVLKN+P+
Sbjct: 5 SVGVPIALLHEGEGRSVTVELKNGEIYRGHLLESEDSMNCQMRDVVLTQRDGQKRKLEQVYVRGSHIKLVILPDVLKNSPL 85
BLAST of mRNA_E_fasciculatus_S2_contig933.17389.1 vs. uniprot
Match: A0A8J2SMY3_9STRA (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SMY3_9STRA) HSP 1 Score: 124 bits (312), Expect = 3.710e-34 Identity = 57/82 (69.51%), Postives = 71/82 (86.59%), Query Frame = 0
Query: 2 AAVGVPIKLLHEGEGHGVTVEMKNGEIYRGHLNEAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIKLVVLPDVLKNAPV 83
A VGVPIKLLHEGEGH VTVE+K+GEIYRG L+E+E+TMNC +T + T RDGRVSK+E VY+RGS IK ++LPD+LK++PV
Sbjct: 6 AQVGVPIKLLHEGEGHVVTVELKSGEIYRGRLDESEETMNCSLTDIVCTARDGRVSKMEHVYIRGSRIKFLILPDLLKHSPV 87
BLAST of mRNA_E_fasciculatus_S2_contig933.17389.1 vs. uniprot
Match: F0Y2Z6_AURAN (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2Z6_AURAN) HSP 1 Score: 124 bits (312), Expect = 4.710e-34 Identity = 59/86 (68.60%), Postives = 73/86 (84.88%), Query Frame = 0
Query: 3 AVGVPIKLLHEGEGHGVTVEMKNGEIYRGHLNEAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIK-----LVVLPDVLKNAPV 83
AVGVPIKLLHEGEGH VT+E+KNGEIYRGHL+E+E+TMNC +T V +T RDGRV+KLE VY+RGS IK ++LPD+LK++PV
Sbjct: 7 AVGVPIKLLHEGEGHMVTIELKNGEIYRGHLDESEETMNCLVTDVVVTARDGRVTKLENVYIRGSQIKRERRAFMILPDLLKHSPV 92
BLAST of mRNA_E_fasciculatus_S2_contig933.17389.1 vs. uniprot
Match: A0A6A3Q7G3_9STRA (Small nuclear ribonucleoprotein Sm D3 n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Q7G3_9STRA) HSP 1 Score: 122 bits (307), Expect = 2.950e-33 Identity = 58/81 (71.60%), Postives = 70/81 (86.42%), Query Frame = 0
Query: 3 AVGVPIKLLHEGEGHGVTVEMKNGEIYRGHLNEAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIKLVVLPDVLKNAPV 83
+VGVPI LLHEGEG VTVE+KNGE+YRGHL E+ED+MNC ++ V +T RDG+ SKLE VY+RGS IKLVVLPDVLKN+P+
Sbjct: 4 SVGVPISLLHEGEGRTVTVELKNGEVYRGHLAESEDSMNCQLSDVLLTARDGQKSKLELVYVRGSQIKLVVLPDVLKNSPL 84
BLAST of mRNA_E_fasciculatus_S2_contig933.17389.1 vs. uniprot
Match: T0QL39_SAPDV (Small nuclear ribonucleoprotein Sm D3 n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QL39_SAPDV) HSP 1 Score: 122 bits (305), Expect = 5.430e-33 Identity = 52/81 (64.20%), Postives = 72/81 (88.89%), Query Frame = 0
Query: 3 AVGVPIKLLHEGEGHGVTVEMKNGEIYRGHLNEAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIKLVVLPDVLKNAPV 83
++GVP+ LLHEGEGH +T+E+KNGEIY+GHL EAED+MNC + VT+TGRDG++S+LEQVY+RGS +KL +LPD+L+ +P+
Sbjct: 4 SLGVPLSLLHEGEGHTITLELKNGEIYKGHLMEAEDSMNCQLKDVTLTGRDGQLSRLEQVYIRGSQVKLFILPDMLQKSPL 84 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig933.17389.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_E_fasciculatus_S2_contig933.17389.1 ID=prot_E_fasciculatus_S2_contig933.17389.1|Name=mRNA_E_fasciculatus_S2_contig933.17389.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=158bpback to top |