prot_E_fasciculatus_S2_contig9317.17379.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig9317.17379.1
Unique Nameprot_E_fasciculatus_S2_contig9317.17379.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length272
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9317.17379.1 vs. uniprot
Match: D7FMN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMN4_ECTSI)

HSP 1 Score: 262 bits (670), Expect = 2.950e-84
Identity = 223/274 (81.39%), Postives = 226/274 (82.48%), Query Frame = 0 
Query:    3 QELSECTTPHKKRASSWATLQDLAAETAEETLDGMAAGGTRTAAGXXXXXXXXXDVDIRKTISSPALQQMLSHRGLSAAAFPPSPTSAAGVSAGGGFGVGLGAVPPHLVGGGLAALPSSNIQAA----AAMPSGLGGVFSPGLGASISGDSAASTXXXXXXXXXXXXXXXXXXXXXXXXXGPGMVGANPPPDVNAFSSAAXXXXXXXGASMNPLQLASXXXXXXXXXXXXXXXXXXXXXRMGGGGAPGGALMQQPGMVGAVA-RGAGTEDMMST 271
            QELSECTTPHKKRASSWATLQDLAAETAEETLDGM  GG      XXXXXXXXX VDIRKTISSPALQQMLSHRGLSAA  PPSPTSAAGVSAGGGFGVGLGAVP HL GGGLAALPSSNI AA    AAMPSGLGGVF+PGLGA +SG SA ST      XXXXXXXX           GPGMVGANPPPDVNAFSSA XXXXXXXGASMNPLQ A XXXXXXXXXXXXXXXXXXXXX  GG GAPGG +MQ PGMVGA A RGAGTEDMMST
Sbjct:   12 QELSECTTPHKKRASSWATLQDLAAETAEETLDGM--GGXXXXXXXXXXXXXXXXVDIRKTISSPALQQMLSHRGLSAA-LPPSPTSAAGVSAGGGFGVGLGAVPSHLGGGGLAALPSSNIPAATAAAAAMPSGLGGVFAPGLGA-MSGGSAVSTASGGAVXXXXXXXXAPPSGEPAG--GPGMVGANPPPDVNAFSSAXXXXXXXXGASMNPLQRAXXXXXXXXXXXXXXXXXXXXXXXXGGAGAPGGVMMQ-PGMVGAAAARGAGTEDMMST 278
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9317.17379.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMN4_ECTSI2.950e-8481.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 268..271

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9317contigE_fasciculatus_S2_contig9317:3701..5954 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9317.17379.1mRNA_E_fasciculatus_S2_contig9317.17379.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig9317 3701..5954 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig9317.17379.1 ID=prot_E_fasciculatus_S2_contig9317.17379.1|Name=mRNA_E_fasciculatus_S2_contig9317.17379.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=272bp
MEQELSECTTPHKKRASSWATLQDLAAETAEETLDGMAAGGTRTAAGAGT
NNNNNSDVDIRKTISSPALQQMLSHRGLSAAAFPPSPTSAAGVSAGGGFG
VGLGAVPPHLVGGGLAALPSSNIQAAAAMPSGLGGVFSPGLGASISGDSA
ASTAAVAGGPVGGFPLGMTAPPSGEPAAGPGMVGANPPPDVNAFSSAAAA
AAAAAGASMNPLQLASMNMIASMNMNLGVKMGLDLAARMGGGGAPGGALM
QQPGMVGAVARGAGTEDMMST*
back to top