prot_E_fasciculatus_S2_contig9316.17378.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig9316.17378.1
Unique Nameprot_E_fasciculatus_S2_contig9316.17378.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length128
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9316.17378.1 vs. uniprot
Match: A0A6H5JVV5_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVV5_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 4.770e-16
Identity = 53/107 (49.53%), Postives = 66/107 (61.68%), Query Frame = 0 
Query:    5 QAKLEALELADXXXXXXXXXXXSDNKKLLGEVDTMKKLIPKPQGGASGGVDAGGGQVLAQKQETK-TKEDFWQEAENPVAPATDHQLVTHDQLKEFAALQDEKHREH 110
            QAKLEALE+              +N KL  +V TM+K IPKPQG  S  VD GGGQ LA K++ K T+E+ WQE     A A D + VT +QL+ FA +QDE+HREH
Sbjct:  591 QAKLEALEI--------------ENGKLTRKVSTMEKNIPKPQGEPSDEVDVGGGQALALKRKVKKTQEEVWQEMAESAA-AADQRPVTQEQLRRFAEVQDERHREH 682
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9316.17378.1 vs. uniprot
Match: D7G8A7_ECTSI (Leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8A7_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 8.850e-16
Identity = 53/107 (49.53%), Postives = 66/107 (61.68%), Query Frame = 0 
Query:    5 QAKLEALELADXXXXXXXXXXXSDNKKLLGEVDTMKKLIPKPQGGASGGVDAGGGQVLAQKQETK-TKEDFWQEAENPVAPATDHQLVTHDQLKEFAALQDEKHREH 110
            QAKLEALE+              +N KL  +V TM+K IPKPQG  S  VD GGGQ LA K++ K T+E+ WQE     A A+  + VT DQL+ FA +QDE+HREH
Sbjct:  589 QAKLEALEI--------------ENGKLTRKVSTMEKSIPKPQGEPSDEVDVGGGQALAFKRKVKKTQEEVWQEMAESAA-ASGQRPVTQDQLRRFAEVQDERHREH 680
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9316.17378.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JVV5_9PHAE4.770e-1649.53Reverse transcriptase domain-containing protein n=... [more]
D7G8A7_ECTSI8.850e-1649.53Leucine rich repeat protein n=1 Tax=Ectocarpus sil... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 3..23

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9316contigE_fasciculatus_S2_contig9316:2726..6080 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9316.17378.1mRNA_E_fasciculatus_S2_contig9316.17378.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig9316 219..6080 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig9316.17378.1 ID=prot_E_fasciculatus_S2_contig9316.17378.1|Name=mRNA_E_fasciculatus_S2_contig9316.17378.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=128bp
DERRQAKLEALELADERRQAEFEVLQSDNKKLLGEVDTMKKLIPKPQGGA
SGGVDAGGGQVLAQKQETKTKEDFWQEAENPVAPATDHQLVTHDQLKEFA
ALQDEKHREHDDRHREHDATSAGIRGH*
back to top