prot_E_fasciculatus_S2_contig93.17353.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig93.17353.1
Unique Nameprot_E_fasciculatus_S2_contig93.17353.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length267
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig93.17353.1 vs. uniprot
Match: A0A6H5LKX2_9PHAE (DUF4149 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LKX2_9PHAE)

HSP 1 Score: 405 bits (1041), Expect = 6.940e-141
Identity = 227/269 (84.39%), Postives = 242/269 (89.96%), Query Frame = 0 
Query:    1 MVLRRSLACAFAGLVLLGIVDGFVAPAFIPAATAGARVKSPVASSA---TIAGAAPRAPLVARRRSALAMTANKAPDKTIITNAAPLTFAAGCSAVAGAVAKINPHAAAFVQLVCLSIWLGMSVYATFIWPVITGLNMRHSSEFASLLGKLAPSFLQLSVAMIMSLGTSSLVIGRANGVQLGIIGISLGITLYNAIVLEPSAIEALEEEQAVEKVLRGPIKQKVAAQEDLPKIQANLANYLGVEVLLDFLCILCAICYAWDLSSSITFA 266
            MVLR SLACA   LVLLGIVDGF+APAFIP ATAGARVK PVASSA   TIAGAAPRAPLV RR  AL MTANKAPD+T+I NA PLTFAAGCSAVA AVA+I+PHAAAFVQLVCLSIWLGMSVYATFIWPVITGLNMR SSEFASLLGKL PS+LQLSVAMIMSLGTSSLVIG AN  QL I+GI+LGITLYNAIVLEPSA+EALEEEQA+E  LRGP KQK+AAQEDLPK+ ANLAN+LG EVLLDFLCILCA+CYAWDL+SSITFA
Sbjct:    1 MVLRGSLACA---LVLLGIVDGFIAPAFIPPATAGARVKLPVASSAPTATIAGAAPRAPLVDRRSRALTMTANKAPDQTVIANAVPLTFAAGCSAVASAVAEISPHAAAFVQLVCLSIWLGMSVYATFIWPVITGLNMRDSSEFASLLGKLGPSYLQLSVAMIMSLGTSSLVIGHANTTQLVILGIALGITLYNAIVLEPSAVEALEEEQAIEIKLRGPNKQKIAAQEDLPKMNANLANFLGAEVLLDFLCILCAVCYAWDLASSITFA 266
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BLAST of mRNA_E_fasciculatus_S2_contig93.17353.1 vs. uniprot
Match: D8LR36_ECTSI (DUF4149 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR36_ECTSI)

HSP 1 Score: 315 bits (807), Expect = 3.670e-106
Identity = 180/207 (86.96%), Postives = 187/207 (90.34%), Query Frame = 0 
Query:    1 MVLRRSLACAFAGLVLLGIVDGFVAPAFIPAATAGARVKSPVASSATIAGAAPRAPLVARRRSALAMTANKAPDKTIITNAAPLTFAAGCSAVAGAVAKINPHAAAFVQLVCLSIWLGMSVYATFIWPVITGLNMRHSSEFASLLGKLAPSFLQLSVAMIMSLGTSSLVIGRANGVQLGIIGISLGITLYNAIVLEPSAIEALEEEQ 207
            MV RRSLACA   LVLLGIVDGF+APAFIP ATAGARVK PVASS TIAGAA RAP VARR SAL MTANKAPD+T I NAAPLTFAAGCSAVA AVA+I+PHAAAFVQLVCLSIWLGMSVYATFIWPVITGLNMR SSEFASLLGKL PS+LQLSVAMIMSLGTSSLVIG AN  QL I+GI+LGITLYNAIVLEPSAIEALEEEQ
Sbjct:    1 MVRRRSLACA---LVLLGIVDGFIAPAFIPPATAGARVKLPVASSGTIAGAARRAPFVARRSSALTMTANKAPDRTAIANAAPLTFAAGCSAVASAVAEISPHAAAFVQLVCLSIWLGMSVYATFIWPVITGLNMRDSSEFASLLGKLGPSYLQLSVAMIMSLGTSSLVIGHANTTQLVILGIALGITLYNAIVLEPSAIEALEEEQ 204
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig93.17353.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LKX2_9PHAE6.940e-14184.39DUF4149 domain-containing protein n=1 Tax=Ectocarp... [more]
D8LR36_ECTSI3.670e-10686.96DUF4149 domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025423Domain of unknown function DUF4149PFAMPF13664DUF4149coord: 112..204
e-value: 1.5E-5
score: 25.3
NoneNo IPR availablePANTHERPTHR23241:SF102LD23009Pcoord: 85..264
NoneNo IPR availablePANTHERPTHR23241LATE EMBRYOGENESIS ABUNDANT PLANTS LEA-RELATEDcoord: 85..264
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 77..98
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 172..177
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 99..109
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 110..131
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 258..266
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 234..257
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 196..233
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 132..150
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 151..171
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 178..195
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..76
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..35
NoneNo IPR availableTMHMMTMhelixcoord: 152..171
NoneNo IPR availableTMHMMTMhelixcoord: 237..259
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 178..200
NoneNo IPR availableTMHMMTMhelixcoord: 110..132
NoneNo IPR availableTMHMMTMhelixcoord: 76..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig93contigE_fasciculatus_S2_contig93:38333..43255 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig93.17353.1mRNA_E_fasciculatus_S2_contig93.17353.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig93 38190..43785 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig93.17353.1 ID=prot_E_fasciculatus_S2_contig93.17353.1|Name=mRNA_E_fasciculatus_S2_contig93.17353.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=267bp
MVLRRSLACAFAGLVLLGIVDGFVAPAFIPAATAGARVKSPVASSATIAG
AAPRAPLVARRRSALAMTANKAPDKTIITNAAPLTFAAGCSAVAGAVAKI
NPHAAAFVQLVCLSIWLGMSVYATFIWPVITGLNMRHSSEFASLLGKLAP
SFLQLSVAMIMSLGTSSLVIGRANGVQLGIIGISLGITLYNAIVLEPSAI
EALEEEQAVEKVLRGPIKQKVAAQEDLPKIQANLANYLGVEVLLDFLCIL
CAICYAWDLSSSITFA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025423DUF4149