prot_E_fasciculatus_S2_contig9292.17345.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig9292.17345.1
Unique Name	prot_E_fasciculatus_S2_contig9292.17345.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	188

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig9292.17345.1 vs. uniprot
Match: D7G3W1_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W1_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 6.500e-39
Identity = 106/123 (86.18%), Postives = 109/123 (88.62%), Query Frame = 0

Query:    1 MWAATTDYAHGIAPAHLRTTIQGVVSXXXXXXXXXXXXXXXXLLYAGLGASRCFAVSAALPSLSLLLLVLPTARRWVSGADARGGRAAAKGMPPRSRXXXXXXXXXXXXXXXXGRSSYELVAK 123
            MWAATT+YAHGIAPAHLRTTIQGVVSXXXXXXXXXXXXXXXXLLYAGLGASRCFAVSAALPSLSLLLLVLPTA+RW+SG DAR GR  AKGMPP S      XXXXXXXX   GRSSYELVAK
Sbjct:  395 MWAATTEYAHGIAPAHLRTTIQGVVSXXXXXXXXXXXXXXXXLLYAGLGASRCFAVSAALPSLSLLLLVLPTAKRWISGTDARDGRPGAKGMPPGSSRRCWGXXXXXXXXD--GRSSYELVAK 515

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BLAST of mRNA_E_fasciculatus_S2_contig9292.17345.1 vs. uniprot
Match: D7G0X9_ECTSI (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0X9_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 1.070e-13
Identity = 41/84 (48.81%), Postives = 48/84 (57.14%), Query Frame = 0

Query:    1 MWAATTDYAHGIAPAHLRTTIQGVVSXXXXXXXXXXXXXXXXLLYAGLGASRCFAVSAALPSLSLLLLVLPTARRWVSGADARG 84
            MW+ATTDYAHGIAPAHLRTT+Q  V                 + YA LG  RCF  +AALP+LSLL LV+      V G   +G
Sbjct:   78 MWSATTDYAHGIAPAHLRTTMQASVGGLKRGLGYGLGAIVGGVSYANLGPRRCFLATAALPALSLLFLVILPRINIVGGLRKQG 161

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig9292.17345.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig9292.17345.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G3W1_ECTSI	6.500e-39	86.18	MFS domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D7G0X9_ECTSI	1.070e-13	48.81	MFS_1_like domain-containing protein n=1 Tax=Ectoc...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 1..76 e-value: 2.9E-10 score: 41.8
None	No IPR available	PANTHER	PTHR16172:SF2	MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 6	coord: 1..153
None	No IPR available	PANTHER	PTHR16172	UNCHARACTERIZED	coord: 1..153
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..27
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 74..187
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 28..48
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 54..73
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 49..53
None	No IPR available	TMHMM	TMhelix		coord: 21..43
None	No IPR available	TMHMM	TMhelix		coord: 48..70
IPR024989	Major facilitator superfamily associated domain	PFAM	PF12832	MFS_1_like	coord: 1..55 e-value: 2.1E-10 score: 40.1
IPR036259	MFS transporter superfamily	SUPERFAMILY	103473	MFS general substrate transporter	coord: 2..70

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig9292	contig	E_fasciculatus_S2_contig9292:795..2395 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig9292.17345.1	mRNA_E_fasciculatus_S2_contig9292.17345.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig9292 731..3128 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig9292.17345.1 ID=prot_E_fasciculatus_S2_contig9292.17345.1|Name=mRNA_E_fasciculatus_S2_contig9292.17345.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=188bp
MWAATTDYAHGIAPAHLRTTIQGVVSGIHWGMGFGLGAMLGGLLYAGLGA
SRCFAVSAALPSLSLLLLVLPTARRWVSGADARGGRAAAKGMPPRSRRRC
WGGCCCGGGGGDDGRSSYELVAKEAQTNDPSDRNDYCCDDDVDADRGSGN
SIDKTDNSSSSNGSDSGEDIRSDDSDLEAQRREATAV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036259	MFS_trans_sf
IPR024989	MFS_assoc_dom