prot_E_fasciculatus_S2_contig9286.17338.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig9286.17338.1
Unique Nameprot_E_fasciculatus_S2_contig9286.17338.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length162
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9286.17338.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 90..113
e-value: 38.0
score: 8.6
coord: 114..138
e-value: 12.0
score: 12.8
coord: 42..66
e-value: 9.4
score: 13.5
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 68..127
e-value: 3.5E-11
score: 42.7
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 44..67
score: 5.887
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 116..139
score: 5.687
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 92..114
score: 7.057
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 68..91
score: 4.955
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 20..42
score: 5.225
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 5..162
e-value: 9.9E-46
score: 158.1
NoneNo IPR availablePANTHERPTHR27000:SF268coord: 40..144
NoneNo IPR availablePANTHERPTHR27000:SF268coord: 7..96
NoneNo IPR availablePANTHERPTHR27000FAMILY NOT NAMEDcoord: 40..144
coord: 7..96
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..162
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 7..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9286contigE_fasciculatus_S2_contig9286:875..5660 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9286.17338.1mRNA_E_fasciculatus_S2_contig9286.17338.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig9286 875..5660 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig9286.17338.1 ID=prot_E_fasciculatus_S2_contig9286.17338.1|Name=mRNA_E_fasciculatus_S2_contig9286.17338.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=162bp
MNVLFGLIGVIPTELGRLVTLQQLCLDRNGLTGSIPKELGSLIKLTRFNL
SGNKLTESIPADLGRLVRLEVIRLEDNKLTGSIPEALGGLVNLEHLWLSD
NNLAGSIPGELGDLVKLETLYLENNKLRGAIPAKLGNLDALSYVQFGNTG
SKSIFRRGNKLS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt
IPR003591Leu-rich_rpt_typical-subtyp