prot_E_fasciculatus_S2_contig9228.17291.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig9228.17291.1
Unique Name	prot_E_fasciculatus_S2_contig9228.17291.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	140

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig9228.17291.1 vs. uniprot
Match: D7FIM0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIM0_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 1.590e-44
Identity = 99/111 (89.19%), Postives = 101/111 (90.99%), Query Frame = 0

Query:   28 QVSLTADNIMELVSTCMVVLEAPFPSTVSAISRQASGGQKGGGIATSSTANNATPNPHASSADNAFAHSALLAVMRDPAPSVLPRAVSEYMIGSMADFSASAGAAAAATSA 138
            +VSLTADNIMELVSTCMVVLEAPFP T SAISRQAS  QKG GIA  STANNAT NPHASSADNAFAHSALLAVMRDPAPSVLPRAVSEYMIGSMADFSASAGAA  AT+A
Sbjct:  763 KVSLTADNIMELVSTCMVVLEAPFP-TASAISRQASSAQKGSGIAAFSTANNATSNPHASSADNAFAHSALLAVMRDPAPSVLPRAVSEYMIGSMADFSASAGAAPTATTA 872

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig9228.17291.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig9228.17291.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FIM0_ECTSI	1.590e-44	89.19	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..6
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 19..26
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 27..140
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 7..18
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..26
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..22 score: 0.592
None	No IPR available	TMHMM	TMhelix		coord: 7..24

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig9228	contig	E_fasciculatus_S2_contig9228:4771..5990 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig9228.17291.1	mRNA_E_fasciculatus_S2_contig9228.17291.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig9228 4769..5990 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig9228.17291.1 ID=prot_E_fasciculatus_S2_contig9228.17291.1|Name=mRNA_E_fasciculatus_S2_contig9228.17291.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=140bp
KTAKNRLFVALLQTLFTLVPHGVIFTKQVSLTADNIMELVSTCMVVLEAP
FPSTVSAISRQASGGQKGGGIATSSTANNATPNPHASSADNAFAHSALLA
VMRDPAPSVLPRAVSEYMIGSMADFSASAGAAAAATSAAA