prot_E_fasciculatus_S2_contig9221.17284.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig9221.17284.1
Unique Nameprot_E_fasciculatus_S2_contig9221.17284.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length210
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9221.17284.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13424TPR_12coord: 78..137
e-value: 4.1E-12
score: 46.2
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 74..164
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 74..164
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 69..189
e-value: 8.9E-20
score: 72.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 74..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9221contigE_fasciculatus_S2_contig9221:767..1521 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9221.17284.1mRNA_E_fasciculatus_S2_contig9221.17284.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig9221 767..1592 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig9221.17284.1 ID=prot_E_fasciculatus_S2_contig9221.17284.1|Name=mRNA_E_fasciculatus_S2_contig9221.17284.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=210bp
VVQAGTGNSDVKSRAGRCASCRDARPTGYVCGRGWGAGGRSRRSCSSEHW
TSRQQSSARTIFRLQTRSSCWVCVYDAGGRLEEAEELFKRALDIQKAKLG
PNDLVAGQTLYQLGLCAHDAGGRLGEAEDFFKLALEIEKTMLGEDDPRVA
RTLSVLCVCVQGRGASGEGGRVTQASSGYPDSKARTGRSQGCKHDCPAEF
VHSTGADGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf