prot_E_fasciculatus_S2_contig921.17272.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig921.17272.1
Unique Nameprot_E_fasciculatus_S2_contig921.17272.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length412
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig921.17272.1 vs. uniprot
Match: D8LPS0_ECTSI (Hypothetical leucine rich repeat calmodulin binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPS0_ECTSI)

HSP 1 Score: 354 bits (908), Expect = 1.580e-108
Identity = 314/328 (95.73%), Postives = 316/328 (96.34%), Query Frame = 0 
Query:   72 ELSRSELPFKVGDVTLMALGEGCPGLQRLSVKGCDGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVNLSDGMQRDFALTGVQALAKGCTGLQTLVLDGCFQISKTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVTDAVVTAFARGCRRLRRLCLRGVVGVPPPLGAPGILAVCSLCRDLEVLDLREVWSLEDSALVGFHDHQMEKLEKVVLMDCPKITGAGVQWLVAGCPALSSLNLKGTKATLTALNIIKERYPYSRIK 399
            ELSRSELPFKVGDVTLMALGEGCP LQ LSVKGCDGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VNLSDGMQRDFALTGVQALAKGCTGLQTLVLDGCFQISKTAL    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  AVTDA V +FARGCRRLRRLCLRGVVGVPPPLGAPGILAVCSLCRDLE+LDLREV SLEDSALVGFHDHQMEKLEKVVLMDCPKITGAGVQWLVAGCPALSSLNLKGTKATLTALNIIKERYPYSRIK
Sbjct:  232 ELSRSELPFKVGDVTLMALGEGCPELQWLSVKGCDGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNLSDGMQRDFALTGVQALAKGCTGLQTLVLDGCFQISKTALRSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSAVTDAAVASFARGCRRLRRLCLRGVVGVPPPLGAPGILAVCSLCRDLELLDLREVLSLEDSALVGFHDHQMEKLEKVVLMDCPKITGAGVQWLVAGCPALSSLNLKGTKATLTALNIIKERYPYSRIK 559
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BLAST of mRNA_E_fasciculatus_S2_contig921.17272.1 vs. uniprot
Match: A0A7S1U2X0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2X0_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 2.050e-15
Identity = 161/335 (48.06%), Postives = 196/335 (58.51%), Query Frame = 0 
Query:   74 SRSELPFKVGDVTLMALGEGCPGLQRLSVKGCDGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVNLSDGMQRDFALTGVQALAKGCTGLQTLVLDGCFQISKTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVTDAVVTAFARGCRRLRRLCLRGV-VGVPPPLGAPGILAVCSLCRDLEVLDLREVWSLEDSALVGFHDHQMEK-LEKVVLMDCPKITGAGVQWLVAGCPALSSLNLKGTKATLTALNIIKERYPYSRIKARKAGGF 406
            SRSE PFKV D++LMALGE  P L+ L + GC+ +TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   LSDGM+RDF L G+QAL      +Q L L GCFQIS TA+                                             G   + +V  F R   R    CLR + +     L   G+  + + C  L+ L+L     L D A++   + Q    L  + L +C  I+ AG+ W+  G  +L +L+L+GT+ T TAL +I +RY YS +  R A  F
Sbjct:  313 SRSEFPFKVTDISLMALGERTPYLETLLLSGCNMLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLLSDGMKRDFGLEGLQALCGDLDEVQHLHLHGCFQISTTAMRAIANGLGAPLRSLSLSNCPKLTLNGMQALWEHCASLEYLSLNGCG---ENIVDNFFRPLVRRPAACLRTLELEDAECLTHTGVAYLVAGCPQLDKLNLSGCVGLNDEAMLHLGESQFYPGLRHLHLTNCTNISDAGLSWMSDGVDSLYTLSLRGTRCTYTALRVIADRYRYSHM-VRNANFF 643
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig921.17272.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LPS0_ECTSI1.580e-10895.73Hypothetical leucine rich repeat calmodulin bindin... [more]
A0A7S1U2X0_9STRA2.050e-1548.06Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006553Leucine-rich repeat, cysteine-containing subtypeSMARTSM00367LRR_CC_2coord: 232..257
e-value: 0.02
score: 24.1
coord: 94..119
e-value: 0.0049
score: 26.1
coord: 342..367
e-value: 17.0
score: 12.8
coord: 39..64
e-value: 0.0012
score: 28.1
coord: 13..38
e-value: 0.11
score: 21.7
coord: 65..93
e-value: 130.0
score: 5.9
coord: 120..145
e-value: 9.8E-5
score: 31.7
coord: 285..314
e-value: 260.0
score: 3.6
coord: 258..284
e-value: 0.09
score: 21.9
coord: 172..205
e-value: 0.016
score: 24.3
coord: 206..231
e-value: 0.38
score: 19.8
coord: 146..171
e-value: 0.072
score: 22.2
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 195..407
e-value: 1.2E-38
score: 134.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..194
e-value: 5.4E-45
score: 155.7
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 39..60
e-value: 0.69
score: 10.1
coord: 121..143
e-value: 0.19
score: 11.9
NoneNo IPR availablePANTHERPTHR13382:SF6SCF E3 UBIQUITIN LIGASE COMPLEX F-BOX PROTEIN GRR1coord: 6..243
NoneNo IPR availablePANTHERPTHR13382:SF6SCF E3 UBIQUITIN LIGASE COMPLEX F-BOX PROTEIN GRR1coord: 197..381
NoneNo IPR availablePANTHERPTHR13382MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR Bcoord: 6..243
NoneNo IPR availablePANTHERPTHR13382MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR Bcoord: 197..381
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..15
score: 0.5
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 3..381

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig921contigE_fasciculatus_S2_contig921:3447..7660 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig921.17272.1mRNA_E_fasciculatus_S2_contig921.17272.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig921 3447..7660 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig921.17272.1 ID=prot_E_fasciculatus_S2_contig921.17272.1|Name=mRNA_E_fasciculatus_S2_contig921.17272.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=412bp
IGHWVLTRLFRGCRALETLSLARCSRVGDEELKELGVGCRGLVRLDLKDC
NQVSDTGLLEVARRCSSLTVLELSRSELPFKVGDVTLMALGEGCPGLQRL
SVKGCDGVTDVGLAWMSSGCPALEYLDVSGCVKVSNAGVTSLCERCPLLE
HLGMASLKHVTDIGVARLGGSCTRLTHLDLSGIVNLSDGMQRDFALTGVQ
ALAKGCTGLQTLVLDGCFQISKTALRAVGGGLRSLKRLSLARCPGLSQEG
LSAVAKGCPNLTELNLPNCGGAVTDAVVTAFARGCRRLRRLCLRGVVGVP
PPLGAPGILAVCSLCRDLEVLDLREVWSLEDSALVGFHDHQMEKLEKVVL
MDCPKITGAGVQWLVAGCPALSSLNLKGTKATLTALNIIKERYPYSRIKA
RKAGGFESTRA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf
IPR006553Leu-rich_rpt_Cys-con_subtyp