prot_E_fasciculatus_S2_contig9136.17208.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig9136.17208.1
Unique Name	prot_E_fasciculatus_S2_contig9136.17208.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	275

Homology

[Close]

BLAST of mRNA_E_fasciculatus_S2_contig9136.17208.1 vs. uniprot
Match: D7FXI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXI9_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 8.760e-42
Identity = 159/240 (66.25%), Postives = 165/240 (68.75%), Query Frame = 0

Query:    1 MLGYCTRRLCCAVAALPEPSXXXXXXXXXXXXXXXQLCSLARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEPPA--------TAASPTSTATVGVTPVSVSATWAPQDRPSLLLRASVAGGRESGTSNGSGAEEGWRAGETEGGANAXXXXXXXXXXXXXXXXXXXXAERQPAAADCGDESGTGGRAGTSGDCGKDDLDGNGSSLRSRMGPALTSEAAGLSELIR 232
            MLGYCTRRLCC V+ALPEPS               QLCSLA+G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             TAASPTSTATVGVTPVSVSATWAPQDRPSLL+RA+  G  ESG S+G   E GWRAGET+GGA A                       QPAA D GDE G GGRAGTSGDC K DLD N     SRMGPALTSEAAGLSELIR
Sbjct:  456 MLGYCTRRLCCVVSALPEPSSSSASRAVAARS---QLCSLAKGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAASPTSTATVGVTPVSVSATWAPQDRPSLLVRATAVGAGESGESDGR-EEGGWRAGETDGGATAAAAAATPARGVAA-------TAEQPAAVDGGDEDGPGGRAGTSGDCAKGDLDSNPGLRSSRMGPALTSEAAGLSELIR 684

[Close]

BLAST of mRNA_E_fasciculatus_S2_contig9136.17208.1 vs. uniprot
Match: A0A6H5KLQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLQ0_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 2.960e-31
Identity = 77/87 (88.51%), Postives = 78/87 (89.66%), Query Frame = 0

Query:  178 QPAAADCGDESGTGGRAGTSGDCGKDDLDGNGSSLRSRMGPALTSEAAGLSELIRRRGGLSALSDGRAVAAVLRAAAPRRQNAFHLQ 264
            QPAA D GDE   GGRAGTSGDC K+DLDGN   LRSRMGPALTSEAAGLSELIRRRGGLSALSDGRAVAAVLRAAAPRRQNAFHLQ
Sbjct:  548 QPAAVDGGDEVSPGGRAGTSGDCAKEDLDGN-PDLRSRMGPALTSEAAGLSELIRRRGGLSALSDGRAVAAVLRAAAPRRQNAFHLQ 633

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig9136.17208.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig9136.17208.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FXI9_ECTSI	8.760e-42	66.25	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KLQ0_9PHAE	2.960e-31	88.51	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 18..29
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 9..17
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 30..275
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..29
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..8

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig9136	contig	E_fasciculatus_S2_contig9136:101..925 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig9136.17208.1	mRNA_E_fasciculatus_S2_contig9136.17208.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig9136 86..925 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig9136.17208.1 ID=prot_E_fasciculatus_S2_contig9136.17208.1|Name=mRNA_E_fasciculatus_S2_contig9136.17208.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=275bp
MLGYCTRRLCCAVAALPEPSSSSASRATAAVAARAQLCSLARGGTAASGG
GGGGSSTGSTRSSLASSATLAAAATVAAAAAVLTPEPPATAASPTSTATV
GVTPVSVSATWAPQDRPSLLLRASVAGGRESGTSNGSGAEEGWRAGETEG
GANAAAAAAAAAASTVGGAAAAATAERQPAAADCGDESGTGGRAGTSGDC
GKDDLDGNGSSLRSRMGPALTSEAAGLSELIRRRGGLSALSDGRAVAAVL
RAAAPRRQNAFHLQHPPQQQQQQQQ