prot_E_fasciculatus_S2_contig9134.17207.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig9134.17207.1
Unique Name	prot_E_fasciculatus_S2_contig9134.17207.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	86

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig9134.17207.1 vs. uniprot
Match: A0A6H5K822_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K822_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 9.520e-38
Identity = 80/86 (93.02%), Postives = 81/86 (94.19%), Query Frame = 0

Query:    1 GDEDDGFDEEDGVDRGDLVQEYTQSLKGRLVLSGGASVAGAALGAMISKSTIQRTPVMSLVGLLVGLVLSVARGAFGDLFRALGLA 86
            GDEDDGFDEEDGV R DLVQEY QS KGRLVLSGGASVAGAALG +ISKSTIQRTPVMSLVGLLVGLVLSVARGAFGDLFRALGLA
Sbjct:  174 GDEDDGFDEEDGVVREDLVQEYAQSFKGRLVLSGGASVAGAALGVIISKSTIQRTPVMSLVGLLVGLVLSVARGAFGDLFRALGLA 259

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BLAST of mRNA_E_fasciculatus_S2_contig9134.17207.1 vs. uniprot
Match: A0A835Z6C8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6C8_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.450e-14
Identity = 38/69 (55.07%), Postives = 54/69 (78.26%), Query Frame = 0

Query:   17 DLVQEYTQSLKGRLVLSGGASVAGAALGAMISKSTIQRTPVMSLVGLLVGLVLSVARGAFGDLFRALGL 85
            D+V  Y+QS KG+ +++ G+ + GA +G  IS+ST+ +TP M+L GL +GL+LS+ARGAFGDL RALGL
Sbjct:  136 DMVVVYSQSAKGKAIVTVGSGLVGAVIGVAISESTVHKTPSMALAGLFLGLMLSIARGAFGDLLRALGL 204

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BLAST of mRNA_E_fasciculatus_S2_contig9134.17207.1 vs. uniprot
Match: D8LMQ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMQ8_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 2.150e-14
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0

Query:   46 MISKSTIQRTPVMSLVGLLVGLVLSVARGAFGDLFRALGLA 86
            MISKSTIQRTPVMSLVGLLVGLVLSVARGAFGDLFRALGLA
Sbjct:    1 MISKSTIQRTPVMSLVGLLVGLVLSVARGAFGDLFRALGLA 41

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig9134.17207.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig9134.17207.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5K822_9PHAE	9.520e-38	93.02	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835Z6C8_9STRA	1.450e-14	55.07	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
D8LMQ8_ECTSI	2.150e-14	100.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 30..48
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..29
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 49..56
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 57..76
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 77..86
None	No IPR available	TMHMM	TMhelix		coord: 55..77
None	No IPR available	TMHMM	TMhelix		coord: 30..48

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig9134	contig	E_fasciculatus_S2_contig9134:2699..3955 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig9134.17207.1	mRNA_E_fasciculatus_S2_contig9134.17207.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig9134 2699..3955 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig9134.17207.1 ID=prot_E_fasciculatus_S2_contig9134.17207.1|Name=mRNA_E_fasciculatus_S2_contig9134.17207.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=86bp
GDEDDGFDEEDGVDRGDLVQEYTQSLKGRLVLSGGASVAGAALGAMISKS
TIQRTPVMSLVGLLVGLVLSVARGAFGDLFRALGLA