prot_E_fasciculatus_S2_contig9107.17186.1 (polypeptide) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9107.17186.1 vs. uniprot
Match: A0A6H5JSJ1_9PHAE (HMG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSJ1_9PHAE) HSP 1 Score: 566 bits (1460), Expect = 3.980e-200 Identity = 283/319 (88.71%), Postives = 295/319 (92.48%), Query Frame = 0
Query: 9 EQSGTTHWVGFSSCRKRAWGMQGSTTNGVLPIGIADSIRKAGCLFLDSTRGAVEGLSEMKDLAGIDTSRIFAFDGRHAAILVTEDRTRVFCQQISAGLYDLGVSTEPRPDWQDILDVAASSLSTDGHGSSARGAVGGMEPLFKALPLWASVVHLAPHRVSIHQRSADGVTDGVAFQHSLINGDGGLVSTGKEEMYHNSVQDAFVIFNTHPSGSTRFIEQSRALTSGHTRSSEARRMVPKKTSPPRRRRKDPNRPRGYVSAFNFFVKDKRSAYVRDAQGFSPGNNNEVNKKLGQAWKELTTEEKNCYQARSDVDKCRYLK 327
+GTTHWVGFSSCRKR WGMQGS NGVLPIGIAD IR AGCLFL+STRGAVEGLSEMKDLA IDTSRIFAFDGRHAAILVTED TRVFCQQISAGLYDLGVS EPRPDWQDILD AASSL DG GS+A GAV GMEPLFKA+PLWASVVH+APHRVS+HQRSADG TDGVAFQHSL++GDGGLVST KEEMYH+SVQDAFVIFNTHPSGSTRF+E SRALTSGHT SSE RR VPKKTSPP+R+RKDPNRPRGYVSAFNFFVKDKRSAYVRDAQG SPGNNNEVNK LGQAWKELTTEEKNCYQARSDVDKCRYLK
Sbjct: 44 SSAGTTHWVGFSSCRKRVWGMQGSNANGVLPIGIADRIRNAGCLFLNSTRGAVEGLSEMKDLAEIDTSRIFAFDGRHAAILVTEDCTRVFCQQISAGLYDLGVSIEPRPDWQDILDAAASSLIPDGVGSNACGAVSGMEPLFKAVPLWASVVHVAPHRVSVHQRSADGATDGVAFQHSLVSGDGGLVSTAKEEMYHSSVQDAFVIFNTHPSGSTRFVEHSRALTSGHTHSSEPRRTVPKKTSPPKRKRKDPNRPRGYVSAFNFFVKDKRSAYVRDAQGVSPGNNNEVNKMLGQAWKELTTEEKNCYQARSDVDKCRYLK 362
BLAST of mRNA_E_fasciculatus_S2_contig9107.17186.1 vs. uniprot
Match: D7G5V4_ECTSI (HMG box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5V4_ECTSI) HSP 1 Score: 543 bits (1398), Expect = 2.120e-193 Identity = 274/299 (91.64%), Postives = 284/299 (94.98%), Query Frame = 0
Query: 29 MQGSTTNGVLPIGIADSIRKAGCLFLDSTRGAVEGLSEMKDLAGIDTSRIFAFDGRHAAILVTEDRTRVFCQQISAGLYDLGVSTEPRPDWQDILDVAASSLSTDGHGSSARGAVGGMEPLFKALPLWASVVHLAPHRVSIHQRSADGVTDGVAFQHSLINGDGGLVSTGKEEMYHNSVQDAFVIFNTHPSGSTRFIEQSRALTSGHTRSSEARRMVPKKTSPPRRRRKDPNRPRGYVSAFNFFVKDKRSAYVRDAQGFSPGNNNEVNKKLGQAWKELTTEEKNCYQARSDVDKCRYLK 327
MQGS TNGVLPIG ADSIRKAGCLFL+ST GAVEGLSE+KDLAGIDTSRIFAFDGRHAAILVTED TRVFCQQISAGLYDLGVS EPRPDWQDILD AASSL DG GS+A GAVGGMEPLF ALPLWASVVH+APHRVS+HQRS+DGVTDGVAFQHSL+NGDGGLVST KEEMYHNSVQDAFVIFNTHPSGSTRF+E S+ALTSGHTRSSEARRMVPKKTSPPRR+RKDPNRPRGYVSAFNFFVKDKRSAYVRDAQG SPGNNNEVNK LGQAWKELTTEEKNCYQARSDVDKCRYLK
Sbjct: 1 MQGSNTNGVLPIGFADSIRKAGCLFLNSTLGAVEGLSEVKDLAGIDTSRIFAFDGRHAAILVTEDCTRVFCQQISAGLYDLGVSIEPRPDWQDILDAAASSLIPDGVGSNACGAVGGMEPLFNALPLWASVVHVAPHRVSVHQRSSDGVTDGVAFQHSLVNGDGGLVSTAKEEMYHNSVQDAFVIFNTHPSGSTRFVEHSQALTSGHTRSSEARRMVPKKTSPPRRKRKDPNRPRGYVSAFNFFVKDKRSAYVRDAQGVSPGNNNEVNKMLGQAWKELTTEEKNCYQARSDVDKCRYLK 299
BLAST of mRNA_E_fasciculatus_S2_contig9107.17186.1 vs. uniprot
Match: A0A2Z4MTA2_SACJA (HMG-box containing protein isoform 1 n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2Z4MTA2_SACJA) HSP 1 Score: 250 bits (638), Expect = 1.220e-76 Identity = 145/309 (46.93%), Postives = 191/309 (61.81%), Query Frame = 0
Query: 29 MQGSTTNGVLPIGIADSIRKAGCLFLDSTRGAVEGLSEMKDLAGIDTSRIFAFDGRHAAILVTEDRTRVFCQQISAGLYDLGVSTEPRPDWQDILDVAASSLSTDGHGSSARGAVGGMEPLFK--ALPLWASVVHLAPHRVSIHQRSADGVTDGVAFQHSLINGDGGLVSTGKEEMYHNSVQDAFVIFNTHPSGSTRFIEQSRALTSGHTRSSEAR-RMVPKKTSPPRRRRKDPNRPRGYVSAFNFFVKDKRSAYVR---DAQGFSPGNNNEVNKKLGQAWKELTTEEKNCYQARSDVDKCRYLKVSRA 331
M+GS + P+ + D +R AG LFLD A+ LS DL GID SRIFA+DG HAAILVTE R R+FCQQ+S GLYDLGVS R DW+D L +SL S A GA G+ + + P W+SVVH+AP RV++HQR AD T+G++ + + + ++VQDAFVIF TH RF + + AL G +R S+ + R+ + + P+R +KDPNRPRGY+SAFNFFVKDKR YV+ +AQG S +NNE+NK LG+ WK T +EK Y+ ++ DK RYLK A
Sbjct: 1 MEGSFRDDGPPVDLFDGVRNAGLLFLDLGCEALASLSAANDLHGIDRSRIFAYDGVHAAILVTEGRRRIFCQQVSCGLYDLGVSINSRSDWRDALSATVTSLIMGSTESIAGGAPCGLNSRSEWFSSPAWSSVVHMAPSRVAVHQRCADEATEGLSVHYFRTMVEDRHLGLSSIHDRQDNVQDAFVIFGTHSRHPVRFRQHTGALGHGRSRYSKPQTRVAYESATAPKRHKKDPNRPRGYISAFNFFVKDKRPTYVQSRPNAQGHSLEHNNEINKMLGKVWKTATEQEKKTYEEKATADKVRYLKEMSA 309
BLAST of mRNA_E_fasciculatus_S2_contig9107.17186.1 vs. uniprot
Match: A0A2Z4MT98_SACJA (HMG-box containing protein isoform 2 n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2Z4MT98_SACJA) HSP 1 Score: 129 bits (324), Expect = 6.390e-32 Identity = 73/150 (48.67%), Postives = 90/150 (60.00%), Query Frame = 0
Query: 29 MQGSTTNGVLPIGIADSIRKAGCLFLDSTRGAVEGLSEMKDLAGIDTSRIFAFDGRHAAILVTEDRTRVFCQQISAGLYDLGVSTEPRPDWQDILDVAASSLSTDGHGSSARGAVGGMEPLFK--ALPLWASVVHLAPHRVSIHQRSADG 176
M+GS + P+ + D +R AG LFLD A+ LS DL GID SRIFA+DG HAAILVTE R R+FCQQ+S GLYDLGVS R DW+D L +SL S A GA G+ + + P W+SVVH+AP R R +G
Sbjct: 1 MEGSFRDDGPPVDLFDGVRNAGLLFLDLGCEALASLSAANDLHGIDRSRIFAYDGVHAAILVTEGRRRIFCQQVSCGLYDLGVSINSRSDWRDALSATVTSLIMGSTESIAGGAPCGLNSRSEWFSSPAWSSVVHMAPSREMSAYRPPEG 150
BLAST of mRNA_E_fasciculatus_S2_contig9107.17186.1 vs. uniprot
Match: A0A7J6V6Z4_THATH (High mobility group b protein n=1 Tax=Thalictrum thalictroides TaxID=46969 RepID=A0A7J6V6Z4_THATH) HSP 1 Score: 55.8 bits (133), Expect = 3.520e-5 Identity = 34/80 (42.50%), Postives = 44/80 (55.00%), Query Frame = 0
Query: 248 KTSPPRRRRKDPNRPRGYVSAFNFFVKDKRSAYVRDAQGFSPGNNNEVNKKLGQAWKELTTEEKNCYQARSDVDKCRYLK 327
+T R+R +DP RP+ Y SA+NFF DKRS + + P + K +G+AW LT EEK YQ DK RY K
Sbjct: 216 RTKKKRQRLEDPARPKRYRSAYNFFFSDKRS----ELKTLCPHRERDFTKMIGEAWNNLTGEEKKVYQEIGTRDKERYQK 291 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9107.17186.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 5
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_E_fasciculatus_S2_contig9107.17186.1 ID=prot_E_fasciculatus_S2_contig9107.17186.1|Name=mRNA_E_fasciculatus_S2_contig9107.17186.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=332bpback to top |