mRNA_E_fasciculatus_S2_contig9107.17186.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E_fasciculatus_S2_contig9107.17186.1
Unique Name	mRNA_E_fasciculatus_S2_contig9107.17186.1
Type	mRNA
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig9107.17186.1 vs.
Match: HMG (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSJ1_9PHAE)

HSP 1 Score: 566 bits (1460), Expect = 3.980e-200
Identity = 283/319 (88.71%), Postives = 295/319 (92.48%), Query Frame = 1

Query:   25 EQSGTTHWVGFSSCRKRAWGMQGSTTNGVLPIGIADSIRKAGCLFLDSTRGAVEGLSEMKDLAGIDTSRIFAFDGRHAAILVTEDRTRVFCQQISAGLYDLGVSTEPRPDWQDILDVAASSLSTDGHGSSARGAVGGMEPLFKALPLWASVVHLAPHRVSIHQRSADGVTDGVAFQHSLINGDGGLVSTGKEEMYHNSVQDAFVIFNTHPSGSTRFIEQSRALTSGHTRSSEARRMVPKKTSPPRRRRKDPNRPRGYVSAFNFFVKDKRSAYVRDAQGFSPGNNNEVNKKLGQAWKELTTEEKNCYQARSDVDKCRYLK 981
              +GTTHWVGFSSCRKR WGMQGS  NGVLPIGIAD IR AGCLFL+STRGAVEGLSEMKDLA IDTSRIFAFDGRHAAILVTED TRVFCQQISAGLYDLGVS EPRPDWQDILD AASSL  DG GS+A GAV GMEPLFKA+PLWASVVH+APHRVS+HQRSADG TDGVAFQHSL++GDGGLVST KEEMYH+SVQDAFVIFNTHPSGSTRF+E SRALTSGHT SSE RR VPKKTSPP+R+RKDPNRPRGYVSAFNFFVKDKRSAYVRDAQG SPGNNNEVNK LGQAWKELTTEEKNCYQARSDVDKCRYLK
Sbjct:   44 SSAGTTHWVGFSSCRKRVWGMQGSNANGVLPIGIADRIRNAGCLFLNSTRGAVEGLSEMKDLAEIDTSRIFAFDGRHAAILVTEDCTRVFCQQISAGLYDLGVSIEPRPDWQDILDAAASSLIPDGVGSNACGAVSGMEPLFKAVPLWASVVHVAPHRVSVHQRSADGATDGVAFQHSLVSGDGGLVSTAKEEMYHSSVQDAFVIFNTHPSGSTRFVEHSRALTSGHTHSSEPRRTVPKKTSPPKRKRKDPNRPRGYVSAFNFFVKDKRSAYVRDAQGVSPGNNNEVNKMLGQAWKELTTEEKNCYQARSDVDKCRYLK 362

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BLAST of mRNA_E_fasciculatus_S2_contig9107.17186.1 vs.
Match: HMG (box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5V4_ECTSI)

HSP 1 Score: 543 bits (1398), Expect = 2.120e-193
Identity = 274/299 (91.64%), Postives = 284/299 (94.98%), Query Frame = 1

Query:   85 MQGSTTNGVLPIGIADSIRKAGCLFLDSTRGAVEGLSEMKDLAGIDTSRIFAFDGRHAAILVTEDRTRVFCQQISAGLYDLGVSTEPRPDWQDILDVAASSLSTDGHGSSARGAVGGMEPLFKALPLWASVVHLAPHRVSIHQRSADGVTDGVAFQHSLINGDGGLVSTGKEEMYHNSVQDAFVIFNTHPSGSTRFIEQSRALTSGHTRSSEARRMVPKKTSPPRRRRKDPNRPRGYVSAFNFFVKDKRSAYVRDAQGFSPGNNNEVNKKLGQAWKELTTEEKNCYQARSDVDKCRYLK 981
            MQGS TNGVLPIG ADSIRKAGCLFL+ST GAVEGLSE+KDLAGIDTSRIFAFDGRHAAILVTED TRVFCQQISAGLYDLGVS EPRPDWQDILD AASSL  DG GS+A GAVGGMEPLF ALPLWASVVH+APHRVS+HQRS+DGVTDGVAFQHSL+NGDGGLVST KEEMYHNSVQDAFVIFNTHPSGSTRF+E S+ALTSGHTRSSEARRMVPKKTSPPRR+RKDPNRPRGYVSAFNFFVKDKRSAYVRDAQG SPGNNNEVNK LGQAWKELTTEEKNCYQARSDVDKCRYLK
Sbjct:    1 MQGSNTNGVLPIGFADSIRKAGCLFLNSTLGAVEGLSEVKDLAGIDTSRIFAFDGRHAAILVTEDCTRVFCQQISAGLYDLGVSIEPRPDWQDILDAAASSLIPDGVGSNACGAVGGMEPLFNALPLWASVVHVAPHRVSVHQRSSDGVTDGVAFQHSLVNGDGGLVSTAKEEMYHNSVQDAFVIFNTHPSGSTRFVEHSQALTSGHTRSSEARRMVPKKTSPPRRKRKDPNRPRGYVSAFNFFVKDKRSAYVRDAQGVSPGNNNEVNKMLGQAWKELTTEEKNCYQARSDVDKCRYLK 299

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BLAST of mRNA_E_fasciculatus_S2_contig9107.17186.1 vs.
Match: HMG-box (containing protein isoform 1 n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2Z4MTA2_SACJA)

HSP 1 Score: 250 bits (638), Expect = 1.220e-76
Identity = 145/309 (46.93%), Postives = 191/309 (61.81%), Query Frame = 1

Query:   85 MQGSTTNGVLPIGIADSIRKAGCLFLDSTRGAVEGLSEMKDLAGIDTSRIFAFDGRHAAILVTEDRTRVFCQQISAGLYDLGVSTEPRPDWQDILDVAASSLSTDGHGSSARGAVGGMEPLFK--ALPLWASVVHLAPHRVSIHQRSADGVTDGVAFQHSLINGDGGLVSTGKEEMYHNSVQDAFVIFNTHPSGSTRFIEQSRALTSGHTRSSEAR-RMVPKKTSPPRRRRKDPNRPRGYVSAFNFFVKDKRSAYVR---DAQGFSPGNNNEVNKKLGQAWKELTTEEKNCYQARSDVDKCRYLKVSRA 993
            M+GS  +   P+ + D +R AG LFLD    A+  LS   DL GID SRIFA+DG HAAILVTE R R+FCQQ+S GLYDLGVS   R DW+D L    +SL      S A GA  G+    +  + P W+SVVH+AP RV++HQR AD  T+G++  +     +   +         ++VQDAFVIF TH     RF + + AL  G +R S+ + R+  +  + P+R +KDPNRPRGY+SAFNFFVKDKR  YV+   +AQG S  +NNE+NK LG+ WK  T +EK  Y+ ++  DK RYLK   A
Sbjct:    1 MEGSFRDDGPPVDLFDGVRNAGLLFLDLGCEALASLSAANDLHGIDRSRIFAYDGVHAAILVTEGRRRIFCQQVSCGLYDLGVSINSRSDWRDALSATVTSLIMGSTESIAGGAPCGLNSRSEWFSSPAWSSVVHMAPSRVAVHQRCADEATEGLSVHYFRTMVEDRHLGLSSIHDRQDNVQDAFVIFGTHSRHPVRFRQHTGALGHGRSRYSKPQTRVAYESATAPKRHKKDPNRPRGYISAFNFFVKDKRPTYVQSRPNAQGHSLEHNNEINKMLGKVWKTATEQEKKTYEEKATADKVRYLKEMSA 309

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BLAST of mRNA_E_fasciculatus_S2_contig9107.17186.1 vs.
Match: HMG-box (containing protein isoform 2 n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2Z4MT98_SACJA)

HSP 1 Score: 129 bits (324), Expect = 6.390e-32
Identity = 73/150 (48.67%), Postives = 90/150 (60.00%), Query Frame = 1

Query:   85 MQGSTTNGVLPIGIADSIRKAGCLFLDSTRGAVEGLSEMKDLAGIDTSRIFAFDGRHAAILVTEDRTRVFCQQISAGLYDLGVSTEPRPDWQDILDVAASSLSTDGHGSSARGAVGGMEPLFK--ALPLWASVVHLAPHRVSIHQRSADG 528
            M+GS  +   P+ + D +R AG LFLD    A+  LS   DL GID SRIFA+DG HAAILVTE R R+FCQQ+S GLYDLGVS   R DW+D L    +SL      S A GA  G+    +  + P W+SVVH+AP R     R  +G
Sbjct:    1 MEGSFRDDGPPVDLFDGVRNAGLLFLDLGCEALASLSAANDLHGIDRSRIFAYDGVHAAILVTEGRRRIFCQQVSCGLYDLGVSINSRSDWRDALSATVTSLIMGSTESIAGGAPCGLNSRSEWFSSPAWSSVVHMAPSREMSAYRPPEG 150

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BLAST of mRNA_E_fasciculatus_S2_contig9107.17186.1 vs.
Match: High (mobility group b protein n=1 Tax=Thalictrum thalictroides TaxID=46969 RepID=A0A7J6V6Z4_THATH)

HSP 1 Score: 55.8 bits (133), Expect = 3.520e-5
Identity = 34/80 (42.50%), Postives = 44/80 (55.00%), Query Frame = 1

Query:  742 KTSPPRRRRKDPNRPRGYVSAFNFFVKDKRSAYVRDAQGFSPGNNNEVNKKLGQAWKELTTEEKNCYQARSDVDKCRYLK 981
            +T   R+R +DP RP+ Y SA+NFF  DKRS    + +   P    +  K +G+AW  LT EEK  YQ     DK RY K
Sbjct:  216 RTKKKRQRLEDPARPKRYRSAYNFFFSDKRS----ELKTLCPHRERDFTKMIGEAWNNLTGEEKKVYQEIGTRDKERYQK 291

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig9107.17186.1 vs.

BLAST of mRNA_E_fasciculatus_S2_contig9107.17186.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 5


Match Name	E-value	Identity	Description
HMG	3.980e-200	88.71	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]
HMG	2.120e-193	91.64	box domain-containing protein n=1 Tax=Ectocarpus s...	[more]
HMG-box	1.220e-76	46.93	containing protein isoform 1 n=1 Tax=Saccharina ja...	[more]
HMG-box	6.390e-32	48.67	containing protein isoform 2 n=1 Tax=Saccharina ja...	[more]
High	3.520e-5	42.50	mobility group b protein n=1 Tax=Thalictrum thalic...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig9107	contig	E_fasciculatus_S2_contig9107:470..4710 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Properties


Property Name	Value
Taxonomic scope	Fungi
Stop	1
Start	1
Seed ortholog score	60.1
Seed ortholog evalue	2.3e-06
Seed eggNOG ortholog	4952.CAG82043
Preferred name	NHP6
Model size	996
Hectar predicted targeting category	other localisation
GOs	GO:0000228,GO:0000785,GO:0000790,GO:0001192,GO:0001195,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006338,GO:0006351,GO:0006352,GO:0006354,GO:0006355,GO:0006357,GO:0006366,GO:0006367,GO:0006383,GO:0006384,GO:0006385,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0008301,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0022607,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031491,GO:0031497,GO:0031974,GO:0031981,GO:0032774,GO:0033554,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034724,GO:0034728,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0044877,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051123,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051276,GO:0051716,GO:0060255,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0070897,GO:0070898,GO:0071103,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141
Exons	4
EggNOG free text desc.	DNA-binding protein that induces severe bending of DNA. Required for DNA-binding by the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. Also augments the fidelity of transcription by RNA polymerase III independently of any role in the FACT complex (By similarity)
EggNOG OGs	3A6QT@33154,3P5CR@4751,3QX7Y@4890,3RV2S@4891,COG5648@1,KOG0381@2759
Ec32 ortholog description	High mobility group domain protein
Ec32 ortholog	Ec-13_001750.1
Cds size	996
COG Functional cat.	K
Best tax level	Saccharomycetes
Best eggNOG OG	NA\|NA\|NA

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1696842563.5155685-CDS-E_fasciculatus_S2_contig9107:469..610	1696842563.5155685-CDS-E_fasciculatus_S2_contig9107:469..610	Ectocarpus fasciculatus EfasUO2	CDS	E_fasciculatus_S2_contig9107 470..610 -
1696842563.5285704-CDS-E_fasciculatus_S2_contig9107:732..1089	1696842563.5285704-CDS-E_fasciculatus_S2_contig9107:732..1089	Ectocarpus fasciculatus EfasUO2	CDS	E_fasciculatus_S2_contig9107 733..1089 -
1696842563.5385125-CDS-E_fasciculatus_S2_contig9107:1224..1393	1696842563.5385125-CDS-E_fasciculatus_S2_contig9107:1224..1393	Ectocarpus fasciculatus EfasUO2	CDS	E_fasciculatus_S2_contig9107 1225..1393 -
1696842563.548352-CDS-E_fasciculatus_S2_contig9107:4381..4710	1696842563.548352-CDS-E_fasciculatus_S2_contig9107:4381..4710	Ectocarpus fasciculatus EfasUO2	CDS	E_fasciculatus_S2_contig9107 4382..4710 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig9107.17186.1	prot_E_fasciculatus_S2_contig9107.17186.1	Ectocarpus fasciculatus EfasUO2	polypeptide	E_fasciculatus_S2_contig9107 470..4710 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E_fasciculatus_S2_contig9107:470..4710-
coding sequence from alignment at E_fasciculatus_S2_contig9107:470..4710-

protein sequence of mRNA_E_fasciculatus_S2_contig9107.17186.1

>prot_E_fasciculatus_S2_contig9107.17186.1 ID=prot_E_fasciculatus_S2_contig9107.17186.1|Name=mRNA_E_fasciculatus_S2_contig9107.17186.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=332bp
MSALLVAFEQSGTTHWVGFSSCRKRAWGMQGSTTNGVLPIGIADSIRKAG
CLFLDSTRGAVEGLSEMKDLAGIDTSRIFAFDGRHAAILVTEDRTRVFCQ
QISAGLYDLGVSTEPRPDWQDILDVAASSLSTDGHGSSARGAVGGMEPLF
KALPLWASVVHLAPHRVSIHQRSADGVTDGVAFQHSLINGDGGLVSTGKE
EMYHNSVQDAFVIFNTHPSGSTRFIEQSRALTSGHTRSSEARRMVPKKTS
PPRRRRKDPNRPRGYVSAFNFFVKDKRSAYVRDAQGFSPGNNNEVNKKLG
QAWKELTTEEKNCYQARSDVDKCRYLKVSRA*

mRNA from alignment at E_fasciculatus_S2_contig9107:470..4710-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E_fasciculatus_S2_contig9107.17186.1 ID=mRNA_E_fasciculatus_S2_contig9107.17186.1|Name=mRNA_E_fasciculatus_S2_contig9107.17186.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4241bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9107:470..4710- (Ectocarpus fasciculatus EfasUO2)
ATGTCTGCTCTTCTTGTGGCCTTTGAACAATCAGGTACAACACACTGGGT
TGGGTTTTCGTCGTGCCGGAAAAGAGCCTGGGGAATGCAAGGCTCGACTA
CAAACGGTGTCCTCCCGATTGGAATTGCTGACAGTATTCGCAAAGCCGGG
TGCCTATTTCTGGATTCGACACGTGGTGCTGTTGAGGGTCTTTCCGAAAT
GAAGGATCTCGCCGGGATCGACACGAGCCGCATATTCGCCTTTGATGGAC
GGCATGCAGCGATTTTGGTGACGGAAGATCGCACTCGGGTATTCTGCCAA
CAAATTTCGGCCGGCCTCTACGATTTAGGGTGAGCAAAGCAAGAAATTGA
CCTGTACGACGAACAGAGGGTGTGACAAGCCGATATCGCTCATCTCCTAT
ATCCAGCTTTCTCTTGTCTCGGTTTAAGGAGAAATCTATCAGGCGTTCTG
ATTGGTCATTTAGAGATCATTTTGAAGTCGTGGAGTTGCCGCCCTGTGGC
CCTCCGCGCCGGGTGTTGGCACGTCCATAAGGGAGGTGTGTCCATATTAC
TAGCGCCCGCGCCAACCGGCTGACCAACGAAAGACATGAGTGACAGCGGG
AAAAATCAAGGTCTCGGGAATGGGGCCAATCGATGCCACATCATGAATCG
CTCTACTATACGTATGTATATGCATATGTACGTGTGTGTGCATACATACA
TTCATACATACATATACCACGTTCTTTCGCAGACACCTAGATATCTTTCA
CAGCACCACACATACCCTCGCCCGAACCTAGGAAGCCACTGCTGCAAAGA
GCGGAGGGCAGCAAAAGCGAGGGGTATTGCAAGCCCAGCCGAAGCCAGGA
TATCGAGGATATCGTGGTATGCTACATCTCCCAACAATTTGAAAATCTCC
CAAGATCCAGCAGTCATAGTGTCAGCAGCTACAAGAATTCAACACGTCAT
GCTGCGGCATCCCCATAATTTGTACTCACCCAACGCACCGTTTGATCTGT
TATTAGCGGTGATACAACGAAAATCACCACAGTATTATACTGTGCTCTGG
GTACCTACGTTTCGTGATCTGCCAAGCGCTACGTCTTACCACTGGTGCCC
CCCCGCGAAAACCACTGTTTTCAGCAGTTTGGACATCAGGTGTGTGGTGC
ACCCACCCTTCGTTACCGAGAAAACTATGAAAAATAAACATGCCCCTCAA
ATCAAAGGGCCAAGCAAGTGCAGGAATTGGCCTGTGCGCTCCTCTCCCCA
CCCCATTGATGTTTACCTATCATCATTCAGCACAGTTTGTGGCGCTACAG
AAAGGTCTCCCATACACGTTTCCTTTACCTCTCTCGACTTGTGCTTGCTC
ACCCAAGCGAGCTTGGCTTTTCGACGATGGCCGGAAACGGCGGGCATGCC
GCCGCACTACTCAGTTGTACATTTTTGTGTGTGAGTCTATGTTTTCCGGG
ATCGGTTGAAGAGAATACCCCAGGAATAAGCAAATTTCTCTTCCATCGAT
TTTTGCCTCAATAATAGCTGCTTCGATATTCTGGTATATAATTTCTATTC
TATCGATTATCTTATATCGTAGCCGGCACTGTAGTATGTTTCAGCAGCGC
GGTCGCCCCGGTCGTCTACTCCGTATCCCCGCAACCTTCTAGCGACAAGG
GTCGAGGGTTCGAATCCCGATGTAAGCGAGATTCTCTTGCAAAGTGAGTT
TTCTCTCACTTCCGTTCATAGTGAAGCCAAGTCAGATTTGTTTTCCAGTA
CTAGGCTATACAGCCATCTACCAACAAAGGGACACGCGACTTGGAGATAT
GTGTACAGCAAGTCAGAGACCGAGGAGAAGTATCACAACCTACACCATGC
AGCGTACCCACCTCACACAAGCATGGTAGACCAGGGTTTCCCACGTGCGT
TTCACACAGCGGAGCTTAGTGACGACTACGGTGTGGCCAACAGACATTTG
AGTGCTGTGTCCCCAAAGTGTCCCCAATTGGGCGTCCAGTACTACCAGAA
CAGACCCAATAGTCAACAGACTTCTACTTTGATGAAAATTCTTCATCACG
TGCCCTCTGAGATATATCAGTCGTGGTTATTCCGCCTGTGACTTTTGTTG
CTATTGTTGTTGTTATTTACTGTTGTCTTCACGTCAAGATCCATTCCGAG
CTTTGCTCAGTACCTTCCATTTTCCATATTGGTCCAACTTACGCGGACGC
CTTCCGTATGATGCGATGATGTGTGTTGTCTGACAAGATTTATGACAGCA
ATCACCCTATTATGGCACCATATCATGCAACTACAGCTGTAAGGTTCCGA
TAGCGCATAATGATGCGTTAAGTTCAGGCGGTCAACGCATGCTATCGTGA
CCGGCTGGTCTACGCCAAGTTCAGCCTCCTCCATCGGGTGACCGCCTTAT
TCTCACCGCTTTACATCGGAATACGGGCTTGTAGGTTATGTGCGACCGTA
CATTGTACAACTTTCGTACCGATTAAATGAAACAAGCGACATCCCAGTAC
CCCATAACAACTACCTAGCCTTCCTACCCGACGTCTCTTCTCTGAAGAGC
TCCGATCCGGGTTTGCACATGAACATTGCCTTTGAATTCCATGCCTTGTT
TTTCACAACGAGAGGGGTCAGACGTCCTTGCCTGGAGTACGTCTCGCCGA
AAGTCGACAACTCAGCAGTAGTTATTTTTCGTGGTGACAACCTCGGGTCT
AATATATAATGGCATATGACCAACAAAGGTCGCGTCCATCATCGGCCAGA
CTAGTGAGCAATATAGGAGTATAATTTCTGACCTGGCAACACAGCAACAA
CATGGAACAACGAGATTAGTGCGTAGAATTCTGAGTGTAGTGTGCTGTTG
AAACTTTTGTAATATCTTGACAAGAACGGACAATTCGTGCGCGAATTGCG
TTCTCATCAGTAATTTTTATCCTTGCACCGACGCATATATGGCGAGAGGG
CACGTCCCCGGTTCCCTTCACTCGTCAAATAACATTTCGATATATTTCCA
GTTTTCCATTCTACTGTAATGTTCAACAGCAGTGCCGGTTACCGGTGTAT
TGAGGAAACACTTCTACGAACCCACCATAGCCTTACACAAGGCAGGGTGC
CTTCTACAATGCCGATTAAAACCCCTTGGTACTATTGTGGCCTTGTGCGC
TGCTACTGTAACGTTTGGTGAGATCTAGGGAAATAAGGCAGGTCCCCCTT
GAGGTTGTTTGACAGGCCAAAAGTTGCAAACGCAGGGGCTATGGGCCTCC
GTCTCGCTACGGCTGCATCACTCGAAGACCGTGTGGTCATTTTGGTCTTC
TCGTCATATTGTGCCAGAGTGTCCACCGAGCCAAGACCTGACTGGCAAGA
CATCCTAGATGTTGCTGCATCATCGCTCAGTACGGATGGCCATGGTAGTA
GCGCGCGCGGGGCCGTCGGCGGAATGGAACCGCTATTCAAGGCGCTACCC
TTGTGGGCATCGGTTGTGCACTTGGCTCCACATCGGGTGCGTGCGTGCCA
TTCTGTAGCTTGAGCGTGTTTTGGCTCCTTCCAGTTATTCTGATGGATGC
ACCACTGTTGGTGCACTGCAGGCGCACGTGCAACGATTGAACTACCTCTA
TTTTCGCGACTCGCCTTCTAGGTTTCAATTCACCAACGCAGCGCTGACGG
CGTCACGGATGGCGTGGCTTTTCAACACTCGCTCATAAACGGAGATGGTG
GGCTTGTCTCAACGGGTAAGGAAGAGATGTACCACAACAGCGTTCAAGAT
GCATTCGTCATTTTCAACACCCATCCTTCCGGTTCTACGAGGTTTATCGA
ACAGTCTCGAGCCTTGACTAGTGGACATACCCGTTCTTCCGAAGCACGTC
GCATGGTGCCCAAGAAGACCTCGCCACCCAGGCGCCGAAGGAAGGACCCG
AACCGTCCGCGTGGCTATGTCAGTGCCTTTAACTTCTTTGTCAAGGACAA
GCGATCGGCCTACGTTCGGGATGCGCAGGTGACACGCGTCTCCCTGTTGG
TTTGGACATGCCCACCACGGTTCCCCAGAGTCATTTTTCACCATCTCAAC
TGCTGTCGTCCGCCGAATGAACACCTTTGTGTACTTCAACAATATGCCAG
GGTTTTTCTCCCGGAAACAACAATGAAGTGAACAAAAAGCTTGGTCAGGC
TTGGAAAGAATTGACAACCGAAGAGAAGAACTGTTATCAAGCGCGATCAG
ACGTGGACAAGTGTCGCTACCTGAAGGTGAGTCGTGCATGA

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9107:470..4710-

>mRNA_E_fasciculatus_S2_contig9107.17186.1 ID=mRNA_E_fasciculatus_S2_contig9107.17186.1|Name=mRNA_E_fasciculatus_S2_contig9107.17186.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=996bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9107:470..4710- (Ectocarpus fasciculatus EfasUO2)
ATGTCTGCTCTTCTTGTGGCCTTTGAACAATCAGGTACAACACACTGGGT
TGGGTTTTCGTCGTGCCGGAAAAGAGCCTGGGGAATGCAAGGCTCGACTA
CAAACGGTGTCCTCCCGATTGGAATTGCTGACAGTATTCGCAAAGCCGGG
TGCCTATTTCTGGATTCGACACGTGGTGCTGTTGAGGGTCTTTCCGAAAT
GAAGGATCTCGCCGGGATCGACACGAGCCGCATATTCGCCTTTGATGGAC
GGCATGCAGCGATTTTGGTGACGGAAGATCGCACTCGGGTATTCTGCCAA
CAAATTTCGGCCGGCCTCTACGATTTAGGAGTGTCCACCGAGCCAAGACC
TGACTGGCAAGACATCCTAGATGTTGCTGCATCATCGCTCAGTACGGATG
GCCATGGTAGTAGCGCGCGCGGGGCCGTCGGCGGAATGGAACCGCTATTC
AAGGCGCTACCCTTGTGGGCATCGGTTGTGCACTTGGCTCCACATCGGGT
TTCAATTCACCAACGCAGCGCTGACGGCGTCACGGATGGCGTGGCTTTTC
AACACTCGCTCATAAACGGAGATGGTGGGCTTGTCTCAACGGGTAAGGAA
GAGATGTACCACAACAGCGTTCAAGATGCATTCGTCATTTTCAACACCCA
TCCTTCCGGTTCTACGAGGTTTATCGAACAGTCTCGAGCCTTGACTAGTG
GACATACCCGTTCTTCCGAAGCACGTCGCATGGTGCCCAAGAAGACCTCG
CCACCCAGGCGCCGAAGGAAGGACCCGAACCGTCCGCGTGGCTATGTCAG
TGCCTTTAACTTCTTTGTCAAGGACAAGCGATCGGCCTACGTTCGGGATG
CGCAGGGTTTTTCTCCCGGAAACAACAATGAAGTGAACAAAAAGCTTGGT
CAGGCTTGGAAAGAATTGACAACCGAAGAGAAGAACTGTTATCAAGCGCG
ATCAGACGTGGACAAGTGTCGCTACCTGAAGGTGAGTCGTGCATGA