prot_E_fasciculatus_S2_contig9096.17173.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig9096.17173.1
Unique Nameprot_E_fasciculatus_S2_contig9096.17173.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length85
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9096.17173.1 vs. uniprot
Match: S4XC43_9CORY (DUF4395 domain-containing protein n=1 Tax=Corynebacterium terpenotabidum Y-11 TaxID=1200352 RepID=S4XC43_9CORY)

HSP 1 Score: 52.8 bits (125), Expect = 2.200e-6
Identity = 27/58 (46.55%), Postives = 38/58 (65.52%), Query Frame = 0
Query:   26 TPGAPKRFAQLIGLLFAAVSMVLAFLEQYVAMGVIGACLFGASFLQGFGNFCIACRVF 83
            T GAPKRFAQ IG++F+  ++VL  +   VA  V+   L  A+ L+GF  FC+ CR+F
Sbjct:  112 TAGAPKRFAQGIGVVFSGAALVLRLVGWPVAADVVLLALVVAASLEGFAGFCLGCRIF 169          
BLAST of mRNA_E_fasciculatus_S2_contig9096.17173.1 vs. uniprot
Match: A0A6I3B9H6_9ACTN (DUF4395 family protein n=6 Tax=root TaxID=1 RepID=A0A6I3B9H6_9ACTN)

HSP 1 Score: 49.3 bits (116), Expect = 3.160e-5
Identity = 26/70 (37.14%), Postives = 39/70 (55.71%), Query Frame = 0
Query:   14 LVEHTVQLRSRFTPGAPKRFAQLIGLLFAAVSMVLAFLEQYVAMGVIGACLFGASFLQGFGNFCIACRVF 83
            +V   +    +F PG PKRFAQ IGL FAA +++L  L+   A  ++ A L  A+ L+     C+ C +F
Sbjct:   66 VVTPKLNFNHKFVPGPPKRFAQTIGLTFAATALILTLLDYSYAANLVIAALVIAATLESVFAICLGCIMF 135          
BLAST of mRNA_E_fasciculatus_S2_contig9096.17173.1 vs. uniprot
Match: A0A4V0WXK8_9ACTN (DUF4395 domain-containing protein n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A4V0WXK8_9ACTN)

HSP 1 Score: 49.3 bits (116), Expect = 3.280e-5
Identity = 25/70 (35.71%), Postives = 40/70 (57.14%), Query Frame = 0
Query:   14 LVEHTVQLRSRFTPGAPKRFAQLIGLLFAAVSMVLAFLEQYVAMGVIGACLFGASFLQGFGNFCIACRVF 83
            ++   +    +F PG PKRFAQ IGL FAA ++ L+ L+  +A  ++ A L  A+ L+     C+ C +F
Sbjct:   66 IITPKLNFNHKFVPGPPKRFAQTIGLTFAATALTLSLLDYSLAAKLVIAALIFAATLESVFAICLGCIMF 135          
BLAST of mRNA_E_fasciculatus_S2_contig9096.17173.1 vs. uniprot
Match: S3V3S2_9LEPT (PF14340 domain protein n=3 Tax=Leptospira wolffii TaxID=409998 RepID=S3V3S2_9LEPT)

HSP 1 Score: 48.1 bits (113), Expect = 8.630e-5
Identity = 35/89 (39.33%), Postives = 47/89 (52.81%), Query Frame = 0
Query:    1 RSLLGPNRRAPNPLVEHTV----QLRSRFTPGAPKRFAQLIGLLFAAVSMVLAFLEQ-YVAMGVIGACLFGASFLQGFGNFCIACRVFG 84
            R L GP       L  H +    +L SR  PG PKRFAQL+GL+F++ ++VL    Q +    V+G  +F A+     G FC  C VFG
Sbjct:   49 RVLYGPKFSLFARLAIHVIVPGLKLGSRTVPGPPKRFAQLVGLVFSSSALVLLLFGQIFYFQIVLGVLVFFATLESALG-FCAGCFVFG 136          
BLAST of mRNA_E_fasciculatus_S2_contig9096.17173.1 vs. uniprot
Match: A0A2E6Z0J8_9CHLR (DUF4395 domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2E6Z0J8_9CHLR)

HSP 1 Score: 48.1 bits (113), Expect = 9.960e-5
Identity = 22/70 (31.43%), Postives = 40/70 (57.14%), Query Frame = 0
Query:   14 LVEHTVQLRSRFTPGAPKRFAQLIGLLFAAVSMVLAFLEQYVAMGVIGACLFGASFLQGFGNFCIACRVF 83
            ++   + ++ +   G PKRFAQLIGL+F+ ++++L          ++ + L   +FL+ F  FC  C+VF
Sbjct:   78 IIVPNINIKEKLVAGPPKRFAQLIGLIFSGLALILFIFSLKEVSMILISILIIFTFLESFLGFCAGCKVF 147          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9096.17173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
S4XC43_9CORY2.200e-646.55DUF4395 domain-containing protein n=1 Tax=Coryneba... [more]
A0A6I3B9H6_9ACTN3.160e-537.14DUF4395 family protein n=6 Tax=root TaxID=1 RepID=... [more]
A0A4V0WXK8_9ACTN3.280e-535.71DUF4395 domain-containing protein n=2 Tax=Actinoba... [more]
S3V3S2_9LEPT8.630e-539.33PF14340 domain protein n=3 Tax=Leptospira wolffii ... [more]
A0A2E6Z0J8_9CHLR9.960e-531.43DUF4395 domain-containing protein n=1 Tax=Chlorofl... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025508Domain of unknown function DUF4395PFAMPF14340DUF4395coord: 12..83
e-value: 6.3E-15
score: 55.7
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..83
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 52..56
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..51
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 84..84
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..32
NoneNo IPR availableTMHMMTMhelixcoord: 33..50
NoneNo IPR availableTMHMMTMhelixcoord: 54..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9096contigE_fasciculatus_S2_contig9096:5581..5835 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9096.17173.1mRNA_E_fasciculatus_S2_contig9096.17173.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig9096 5581..5835 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig9096.17173.1 ID=prot_E_fasciculatus_S2_contig9096.17173.1|Name=mRNA_E_fasciculatus_S2_contig9096.17173.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=85bp
RSLLGPNRRAPNPLVEHTVQLRSRFTPGAPKRFAQLIGLLFAAVSMVLAF
LEQYVAMGVIGACLFGASFLQGFGNFCIACRVFG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025508DUF4395