prot_E_fasciculatus_S2_contig8982.17074.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig8982.17074.1
Unique Name	prot_E_fasciculatus_S2_contig8982.17074.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	189

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig8982.17074.1 vs. uniprot
Match: D7FLA3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLA3_ECTSI)

HSP 1 Score: 362 bits (930), Expect = 1.560e-126
Identity = 183/188 (97.34%), Postives = 187/188 (99.47%), Query Frame = 0

Query:    1 MVLWVPVFVAAAVSVCVGVLFPRAPTWQIVEMKYRGLSVNIASIGVDMKIDMGLEVFNPNYVPATLKGIVMTMFHEDLGGEEAPFGVVTFAGENAARLPARGSAVVQAQMEVVSLPTSMAMGIAKDVADGGVIVSRASAIMDVKVMGGDILIEADCVQHMQADVFPIKINEVDCKYYYKNVRVPVLPP 188
            MVLWVPVFVAAAVSVCVGV+FPRAPTWQIV+MKYRGLS+NIASIGVDMKIDMGLEVFNPNYVPATLKGIVMTMFHEDLGGEEAPFGVVTFAGENAARLPARGSAVVQAQMEVVSLPTSMAMGIAKDVADGGVIVSRASA MDVKVMGGDILIEADCVQHMQADVFPIKINE+DCKYYYKNVRVPVLPP
Sbjct:    1 MVLWVPVFVAAAVSVCVGVMFPRAPTWQIVDMKYRGLSMNIASIGVDMKIDMGLEVFNPNYVPATLKGIVMTMFHEDLGGEEAPFGVVTFAGENAARLPARGSAVVQAQMEVVSLPTSMAMGIAKDVADGGVIVSRASAFMDVKVMGGDILIEADCVQHMQADVFPIKINEIDCKYYYKNVRVPVLPP 188

[Close]

BLAST of mRNA_E_fasciculatus_S2_contig8982.17074.1 vs. uniprot
Match: A0A836CLA5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLA5_9STRA)

HSP 1 Score: 127 bits (320), Expect = 7.930e-34
Identity = 73/178 (41.01%), Postives = 109/178 (61.24%), Query Frame = 0

Query:   13 VSVCVGVLFPRAPTWQIVEMKYRGLSVNIASIGVDMKIDMGLEVFNPNYVPATLKGIVMTMFHEDLGGEEAPFGVVTFAGENAARLPARGSAVVQAQMEVVSLPTSMAMGIAKDVA-DGGVIVSRASAIMDVKVMGGDIL--IEADCVQHMQADVFPIKINEVDCKYYYKNVRVPVLP 187
            V+V +   FPRAPTWQI   KY  +S N     +  ++++ LE++N N + A +  I + + H D  G E PF  +  AG+ A  LPARGS      M + +L  +MA  +A+D A +GG +V+RA + MDV V+GG     +EA+CVQH++AD FP+++  +DC+YY    RVP+LP
Sbjct:   12 VAVLIANFFPRAPTWQIRGQKYTSVSFNY-DFTMAAEMELELELYNDNLLSAHVNAIELEVLHRDAWGVERPFARIHVAGDFA--LPARGSVRRAGTMVMDALAPAMAGALARDAAANGGTLVTRAHSTMDVSVLGGAARARLEAECVQHLRADAFPMEVTYIDCRYYMGRHRVPMLP 186

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig8982.17074.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig8982.17074.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FLA3_ECTSI	1.560e-126	97.34	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A836CLA5_9STRA	7.930e-34	41.01	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..1
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..18
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 14..18
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 19..188
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 2..13
None	No IPR available	TMHMM	TMhelix		coord: 2..24

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig8982	contig	E_fasciculatus_S2_contig8982:1078..6122 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig8982.17074.1	mRNA_E_fasciculatus_S2_contig8982.17074.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig8982 415..6122 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig8982.17074.1 ID=prot_E_fasciculatus_S2_contig8982.17074.1|Name=mRNA_E_fasciculatus_S2_contig8982.17074.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=189bp
MVLWVPVFVAAAVSVCVGVLFPRAPTWQIVEMKYRGLSVNIASIGVDMKI
DMGLEVFNPNYVPATLKGIVMTMFHEDLGGEEAPFGVVTFAGENAARLPA
RGSAVVQAQMEVVSLPTSMAMGIAKDVADGGVIVSRASAIMDVKVMGGDI
LIEADCVQHMQADVFPIKINEVDCKYYYKNVRVPVLPP*