prot_E_fasciculatus_S2_contig896.17050.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig896.17050.1
Unique Nameprot_E_fasciculatus_S2_contig896.17050.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length318
Homology
BLAST of mRNA_E_fasciculatus_S2_contig896.17050.1 vs. uniprot
Match: A0A6H5K763_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K763_9PHAE)

HSP 1 Score: 315 bits (806), Expect = 6.140e-104
Identity = 210/322 (65.22%), Postives = 227/322 (70.50%), Query Frame = 0
Query:    1 MSSRRETGG--GGRQLAAALLASVVLNACFDVAAGFSSGIPCPADLFSCLGNDECSSCLDALQESDLAVLDGDFELCGDLYADVCTTAQAVDCNTDNEELVEFLTCVADDSYGCGDFTTCADFLPAEEXXXXXXXXXXXPSPLVANAKTASPGTXXXXXXXXXXXXXXXXXXPAALVPTPXXXFXXXXXXXXXXXXXXXX-APSPGSRGGL-FSPTAAPTGGGNQQGLGTAFPTSASVFEGFMDTLAPSAAPTGPDGG-LRGGVAFSDSPTAAPTIGFEDALDGASAGSALAVASPVAVVAVAVVFFAATALV-DFSPYHLA 316
            MSSR+ TGG  GGRQLA ALLA VVLNACFD+  GFSSGIPCP DLFSCLG+DECSSCLDALQE+DL ++ GDFELC DLYA VC  A+A+ CNTDNEELVEFLTCVADDS+GCGDFTTCADF PAE            P P V  +  A+                      AA VP P   F  X     XXXXXXXX APS GSRGGL FSPTAAPTGGGN +G  TA PT AS FEGFMDTLAPSA         LRGG  FSD+PTA PT+GFED LDG SAGSALAVA+PV VVA AVVFFAATAL+ DFS Y+LA
Sbjct:    1 MSSRQGTGGTGGGRQLATALLALVVLNACFDLGTGFSSGIPCPVDLFSCLGDDECSSCLDALQENDLPLIGGDFELCDDLYASVCAAAEAIGCNTDNEELVEFLTCVADDSFGCGDFTTCADF-PAE---------VETPPPTVPPSXXAT--------------------TTAAAVPXPAPSFPFXATAAPXXXXXXXXSAPSSGSRGGLPFSPTAAPTGGGNAKGRDTASPTPASSFEGFMDTLAPSAXXXXXXXXXLRGGDVFSDTPTAVPTVGFEDELDGVSAGSALAVATPV-VVAAAVVFFAATALLADFSQYNLA 291          
BLAST of mRNA_E_fasciculatus_S2_contig896.17050.1 vs. uniprot
Match: D8LCK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK8_ECTSI)

HSP 1 Score: 300 bits (769), Expect = 5.870e-98
Identity = 218/324 (67.28%), Postives = 230/324 (70.99%), Query Frame = 0
Query:    1 MSSRRETGGG----GRQLAAALLASVVLNACFDVAAGFSSGIPCPADLFSCLGNDECSSCLDALQESDLAVLDGDFELCGDLYADVCTTAQAVDCNTDNEELVEFLTCVADDSYGCGDFTTCADFLPAEEXXXXXXXXXXXPSPLVANAKTASPGTXXXXXXXXXXXXXXXXXXPAALVPTPXXXFXXXXXXXXXXXXXXXXAPSPGSRGG-LFSPTAAPTGGGNQQGLGTAFPTSASVFEGFMDTLAPSAAPTGPDGGLRGGVAFSDSPTAAPTIGFEDALDGASAGSALAVASPVAVVAVAVVFF-AATALV-DFSPYHLAA 317
            MSSR+ETG       RQLA ALLA V LNACFDV AGFSSGIPCP DLFSCLG+DECSSCLDALQE+DL +L GDFELCGDLYA VC  A+AV CNTDNE+LVEFLTCVADDSYGCGDFTTCADF PAEEXXXXXXXXXXX               XXXXXXX            A   PTP            XXXXXXXX      RGG LFSP       GN +GL TA+PTSASVFEGFMDTLAPSAAPTGPDGGL GG  FS +PTAAPT+GFEDALDG SAGSALAVA+PV V         AATAL+ DFSPY LAA
Sbjct:    1 MSSRQETGXXXXXXSRQLATALLALVALNACFDVGAGFSSGIPCPVDLFSCLGDDECSSCLDALQENDLPILGGDFELCGDLYAGVCAAAEAVGCNTDNEDLVEFLTCVADDSYGCGDFTTCADF-PAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAPTAV-----AVPTPTPSSFPFPETAAPTXXXXXXXXXXXXXXRGGQLFSPXXXXXXXGNGKGLDTAYPTSASVFEGFMDTLAPSAAPTGPDGGLWGGAVFSGTPTAAPTVGFEDALDGVSAGSALAVATPVIVXXXXXXXXXAATALLADFSPYTLAA 318          
BLAST of mRNA_E_fasciculatus_S2_contig896.17050.1 vs. uniprot
Match: D8LMI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMI0_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 1.910e-10
Identity = 36/86 (41.86%), Postives = 51/86 (59.30%), Query Frame = 0
Query:   35 SSGIPCPADLFSCLGNDECSSCLDALQESDLAVLDGDFELCGDLYADVCTTAQAVDCNTDNEELVEFLTCVADDSYGCGDFTTCAD 120
            +S + CP++  SCL +D+CSSCL AL E+    ++  F  C  L+A VCT A    C+  N  L +F  CVAD+ + C  F +CAD
Sbjct:   32 NSAVSCPSETLSCLADDDCSSCLTALDETS-DTINPVFADCNVLFASVCTFAANNGCDLTNPLLEDFAACVADEEFSCPGFVSCAD 116          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig896.17050.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K763_9PHAE6.140e-10465.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCK8_ECTSI5.870e-9867.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LMI0_ECTSI1.910e-1041.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..284
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 309..317
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 285..308
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..33
score: 0.619
NoneNo IPR availableTMHMMTMhelixcoord: 286..308

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig896contigE_fasciculatus_S2_contig896:4853..5806 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig896.17050.1mRNA_E_fasciculatus_S2_contig896.17050.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig896 4853..5806 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig896.17050.1 ID=prot_E_fasciculatus_S2_contig896.17050.1|Name=mRNA_E_fasciculatus_S2_contig896.17050.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=318bp
MSSRRETGGGGRQLAAALLASVVLNACFDVAAGFSSGIPCPADLFSCLGN
DECSSCLDALQESDLAVLDGDFELCGDLYADVCTTAQAVDCNTDNEELVE
FLTCVADDSYGCGDFTTCADFLPAEEEEEETPPPTATPSPLVANAKTASP
GTAAPSGGGGGGDDDATTTAPAALVPTPTPSFPLPETTAPTAVATATSAP
SPGSRGGLFSPTAAPTGGGNQQGLGTAFPTSASVFEGFMDTLAPSAAPTG
PDGGLRGGVAFSDSPTAAPTIGFEDALDGASAGSALAVASPVAVVAVAVV
FFAATALVDFSPYHLAA*
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