prot_E_fasciculatus_S2_contig8936.17034.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8936.17034.1
Unique Nameprot_E_fasciculatus_S2_contig8936.17034.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length229
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig8936.17034.1 vs. uniprot
Match: D8LN05_ECTSI (PHD-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN05_ECTSI)

HSP 1 Score: 290 bits (743), Expect = 4.890e-90
Identity = 187/213 (87.79%), Postives = 190/213 (89.20%), Query Frame = 0 
Query:    1 EGKLLACREEGCGRRFHMGCLKPPLSRTPKEGDWSCPICRKRKAHAEREAKAQAKRDQKKRELAAKLAKSPVKTIKLEATDGPRNIIGIILPERSVESVCDALRGYEAELEKQREAGERREXXXXXXXXXXXXXXXXAKRAQQAMKLQERNKQKXXXXXXXXXXXXXXXXSGDVK--EEAVEAEEDGGAAPVLSSLDGGRGSFNGDLVQLLQG 211
            EGKLLACREEGCGRRFHMGCLKPPLSRTPKEG+WSCPICRKRKAHAEREAKAQAKRDQKKRELAAKLAKSPVKTIKLEATDGPRNIIGIILPERSVESVCDALRGYEAELEKQREAGERRE XXXXXXXXXXXXXXX    QQAMKL+ERNKQK       XXXX     SGDVK  EEA E E+DGGA PVLSSLDG RGSFNGDLVQLLQG
Sbjct:  559 EGKLLACREEGCGRRFHMGCLKPPLSRTPKEGEWSCPICRKRKAHAEREAKAQAKRDQKKRELAAKLAKSPVKTIKLEATDGPRNIIGIILPERSVESVCDALRGYEAELEKQREAGERRERXXXXXXXXXXXXXXXXXXXQQAMKLEERNKQKGKAHGGGXXXXA----SGDVKREEEAGEEEQDGGA-PVLSSLDG-RGSFNGDLVQLLQG 765
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BLAST of mRNA_E_fasciculatus_S2_contig8936.17034.1 vs. uniprot
Match: A0A6H5KWU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWU5_9PHAE)

HSP 1 Score: 279 bits (713), Expect = 7.070e-83
Identity = 179/213 (84.04%), Postives = 181/213 (84.98%), Query Frame = 0 
Query:    1 EGKLLACREEGCGRRFHMGCLKPPLSRTPKEGDWSCPICRKRKAHAEREAKAQAKRDQKKRELAAKLAKSPVKTIKLEATDGPRNIIGIILPERSVESVCDALRGYEAELEKQREAGERREXXXXXXXXXXXXXXXXAKRAQQAMKLQERNKQKXXXXXXXXXXXXXXXXSGDVK--EEAVEAEEDGGAAPVLSSLDGGRGSFNGDLVQLLQG 211
            EGKLLACREEGCGRRFHMGCLKPPLSRTPKEG WSCPICRKR AH EREAKAQAKRDQKKRELAAKLAKSPVKTIKLEATDGPRNIIGIILPERSVESVCDALRGYEAELEKQREAGERREXXXXXXXXXXXXXXXX      AMKL+ERNKQK                 GDVK  EEA E E+DGGA PVLSSLDG RGSFNGDLVQLLQG
Sbjct:  851 EGKLLACREEGCGRRFHMGCLKPPLSRTPKEGKWSCPICRKRTAHLEREAKAQAKRDQKKRELAAKLAKSPVKTIKLEATDGPRNIIGIILPERSVESVCDALRGYEAELEKQREAGERREXXXXXXXXXXXXXXXXXXXXXXAMKLEERNKQKGKVGGGGAGAR------GDVKREEEAKEEEQDGGA-PVLSSLDG-RGSFNGDLVQLLQG 1055
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8936.17034.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LN05_ECTSI4.890e-9087.79PHD-type domain-containing protein (Fragment) n=1 ... [more]
A0A6H5KWU5_9PHAE7.070e-8384.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 96..158
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 2..40
e-value: 2.1E-5
score: 34.0
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..64
e-value: 3.3E-12
score: 47.9
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 2..41
e-value: 5.3E-8
score: 32.6
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 1..42
score: 8.547
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 2..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8936contigE_fasciculatus_S2_contig8936:2951..5361 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8936.17034.1mRNA_E_fasciculatus_S2_contig8936.17034.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8936 2949..5361 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8936.17034.1 ID=prot_E_fasciculatus_S2_contig8936.17034.1|Name=mRNA_E_fasciculatus_S2_contig8936.17034.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=229bp
EGKLLACREEGCGRRFHMGCLKPPLSRTPKEGDWSCPICRKRKAHAEREA
KAQAKRDQKKRELAAKLAKSPVKTIKLEATDGPRNIIGIILPERSVESVC
DALRGYEAELEKQREAGERREREEKEARETVERDRQEAKRAQQAMKLQER
NKQKGKARGGGAGAGAGAGASGDVKEEAVEAEEDGGAAPVLSSLDGGRGS
FNGDLVQLLQGGGGARAAKRTAMQQMKRD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011011Znf_FYVE_PHD
IPR019787Znf_PHD-finger
IPR013083Znf_RING/FYVE/PHD
IPR001965Znf_PHD