prot_E_fasciculatus_S2_contig8913.17016.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8913.17016.1
Unique Nameprot_E_fasciculatus_S2_contig8913.17016.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length164
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig8913.17016.1 vs. uniprot
Match: A0A7R9U9L0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9L0_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 1.010e-5
Identity = 43/97 (44.33%), Postives = 49/97 (50.52%), Query Frame = 0 
Query:    2 GRGGADRDDEAQGPDRARGRALGVPGGHHRIRPFRGXXXXXXXXXXXAQRPAHRKAQPAQAGREGEGLPGGGPAEGGRVPP--PRRGY--PQEAEHP 94
            GRGGAD+ DEAQGPDRARGR  GVP GHHR +  R               P  R+ +P      GE     G  EG R PP   RRG+  P + E P
Sbjct:   97 GRGGADQHDEAQGPDRARGRTAGVPRGHHRQQALRRAHQRSGGL------PGDRRGEP-----RGEAPATEGRREGARQPPWRSRRGHGLPPDGERP 182
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8913.17016.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7R9U9L0_9STRA1.010e-544.33Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8913contigE_fasciculatus_S2_contig8913:488..3449 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8913.17016.1mRNA_E_fasciculatus_S2_contig8913.17016.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8913 488..6148 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8913.17016.1 ID=prot_E_fasciculatus_S2_contig8913.17016.1|Name=mRNA_E_fasciculatus_S2_contig8913.17016.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=164bp
PGRGGADRDDEAQGPDRARGRALGVPGGHHRIRPFRGGGGGGRQEGGGAQ
RPAHRKAQPAQAGREGEGLPGGGPAEGGRVPPPRRGYPQEAEHPVPVLHG
PRRHQRGKGDGKGGGEEGKAQAREGKAGQHPQGGGGDQEDPQTSVQRARE
ADSTDEAHERGVQ*
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