mRNA_E_fasciculatus_S2_contig8913.17016.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8913.17016.1
Unique NamemRNA_E_fasciculatus_S2_contig8913.17016.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8913.17016.1 vs.
Match: Structural (maintenance of chromosomes protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ01_ECTSI)

HSP 1 Score: 378 bits (971), Expect = 2.140e-117
Identity = 251/263 (95.44%), Postives = 260/263 (98.86%), Query Frame = 2
Query:    2 QGEVEQIAMMKPKGLTEHEDGLLEYLEDIIGSDRFVEAAEEAAKKVEELNDQRTEKLNRLKLAEKEKDSLEGDRQKADEFLRLDAAIRKKQNILYQFYMAHAATNVEKVMEKEEERKERLRHEKEKLASTLKEVEETKKIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMKHFKEQTKKLEAAVKKDTKRSKDSLARAAELEGSLDGLRRAVGQAEARKRTEDDALEEVNESLKGKTAELRGKLEGEQERVRPVREE 790
            QGEVEQIAMMKPKGLTEHEDGLLEYLEDIIGSDRFVEAAEEAA++VEELNDQRTEKLNRLKLAEKEKDSLEGD+QKA EFLRLDAAIRKKQNILYQ  MAHAATNVEKVMEKEEERKERLRHE+EKLASTLKE+EETKK+HXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMKHFKEQTKKLEAA+KKDTKRSKDSLARAAELEGSLDGLRRAVGQAEARK+TED+ALEEVNESLKGKTAELRGKLEGEQERVRPVREE
Sbjct:  235 QGEVEQIAMMKPKGLTEHEDGLLEYLEDIIGSDRFVEAAEEAARRVEELNDQRTEKLNRLKLAEKEKDSLEGDKQKAYEFLRLDAAIRKKQNILYQSNMAHAATNVEKVMEKEEERKERLRHEREKLASTLKELEETKKVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMKHFKEQTKKLEAAIKKDTKRSKDSLARAAELEGSLDGLRRAVGQAEARKKTEDEALEEVNESLKGKTAELRGKLEGEQERVRPVREE 497          
BLAST of mRNA_E_fasciculatus_S2_contig8913.17016.1 vs.
Match: Structural (maintenance of chromosomes protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JYQ7_9STRA)

HSP 1 Score: 146 bits (369), Expect = 1.620e-35
Identity = 102/263 (38.78%), Postives = 150/263 (57.03%), Query Frame = 2
Query:    2 QGEVEQIAMMKPKGLTEHEDGLLEYLEDIIGSDRFVEAAEEAAKKVEELNDQRTEKLNRLKLAEKEKDSLEGDRQKADEFLRLDAAIRKKQNILYQFYMAHAATNVEKVMEKEEERKERLRHEKEKLASTLKEVEETKKIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMKHFKEQTKKLEAAVKKDTKRSKDSLARAAELEGSLDGLRRAVGQAEARKRTEDDALEEVNESLKGKTAELRGKLEGEQERVRPVREE 790
            QGEVE I+MM PKG TE+++GLLEYLEDIIGS+++V  A EAA+KVE LN+QR E+LNR+K  EKEKDSLEG + +A+  L  +  IR+K+NIL+Q   +    ++EKV    +E  E+L  E+ KL +    V E +  H                                  +KH K   KKLEA ++K++++++ S  +A   E S+  L + +      K  ED  LE++ E +KG T  LR +LE + + + PV++E
Sbjct:  169 QGEVEMISMMAPKGKTENDEGLLEYLEDIIGSNKYVADATEAAEKVESLNEQRQERLNRVKAVEKEKDSLEGAKLEAEGLLGKEREIRRKKNILFQINASEITRDLEKVNSHRDELVEKLEEERSKLKAASDRVAEIEAGHKEQASEYEELHRQALKTKEDFTAYERRDIKMREDIKHLKSLKKKLEAKIRKESEKAEKSSNKAIAAEESIPELEKRIEALTEGKAIEDAKLEKIYEDMKGVTEGLRLELEQKTQELAPVQQE 431          
BLAST of mRNA_E_fasciculatus_S2_contig8913.17016.1 vs.
Match: Structural (maintenance of chromosomes protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JL04_FISSO)

HSP 1 Score: 137 bits (344), Expect = 3.320e-32
Identity = 92/263 (34.98%), Postives = 148/263 (56.27%), Query Frame = 2
Query:    2 QGEVEQIAMMKPKGLTEHEDGLLEYLEDIIGSDRFVEAAEEAAKKVEELNDQRTEKLNRLKLAEKEKDSLEGDRQKADEFLRLDAAIRKKQNILYQFYMAHAATNVEKVMEKEEERKERLRHEKEKLASTLKEVEETKKIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMKHFKEQTKKLEAAVKKDTKRSKDSLARAAELEGSLDGLRRAVGQAEARKRTEDDALEEVNESLKGKTAELRGKLEGEQERVRPVREE 790
            QGEVE I+MM PKG TEH++GLLEYLEDIIGS++FVE    AA+K E L  QR+EKLNR+K AEKEKD+LE  + +A++ L ++  IR+++NILYQ           K+ E++E  + +++   E L ++   ++E +                                     +KHFK+Q K L+A +  + ++   ++A+  E E S+  + RA+   +  K  ED+ LE++ + +KG T  LR +L+ + + + P+ +E
Sbjct:  179 QGEVEMISMMPPKGKTEHDEGLLEYLEDIIGSNKFVEETNLAAEKAEVLTGQRSEKLNRVKAAEKEKDALESAKVEAEQLLGIEREIRRQKNILYQINQLQVDREAAKLNEEKENVQSQIQALGEDLRASNDRIKEIESGLSEQRKEYELIYDELTKTKEEFAAYERRDIKVREEIKHFKKQKKSLQAKISSEAEKEASAIAKGKEAEESIPEIERAICDVKESKAVEDEKLEKIYDEIKGITQNLRTELDQKTQELAPILQE 441          
BLAST of mRNA_E_fasciculatus_S2_contig8913.17016.1 vs.
Match: Structural (maintenance of chromosomes protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YML7_9STRA)

HSP 1 Score: 131 bits (329), Expect = 3.200e-30
Identity = 118/262 (45.04%), Postives = 154/262 (58.78%), Query Frame = 2
Query:    2 QGEVEQIAMMKPKGLTEHEDGLLEYLEDIIGSDRFVEAAEEAAKKVEELNDQRTEKLNRLKLAEKEKDSLEGDRQKADEFLRLDAAIRKKQNILYQFYMAHAATNVEKVMEKEEERKERLRHEKEKLASTLKEVEETKKIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMKHFKEQTKKLEAAVKKDTKRSKDSLARAAELEGSLDGLRRAVGQAEARKRTEDDALEEVNESLKGKTAELRGKLEGEQERVRPVRE 787
            QGEVEQIAMMKPK    H++GLLEYLEDIIGS+R VEA E AAK+VEE ++ R E+LNRLK AEKEK++LEG + +A+ FL+ +  +RK +N+LYQ  +A A  N  +V  + EE       E+ +LA T           XXXXXXXXXXXXXXXXXX                +K+ + Q KKLEAA K+D K + +++ARA   E +L  L  A  +AE                 + +T ELR +LE +Q    P  E
Sbjct:  190 QGEVEQIAMMKPKAEGPHDEGLLEYLEDIIGSNRHVEATEAAAKEVEERSEARAERLNRLKAAEKEKEALEGAKSEAEAFLQKERDLRKLRNVLYQICIAEAEGNAAEVAARREELARLQGVERARLAETEXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEFAEYERKDIKYQEDLKYLRAQIKKLEAAAKRDAKAAAEAVARAEASEAALPDLEAARTRAEKXXXXXXXXXXXXXXXARDETEELRSELEAKQAEAAPAAE 451          
BLAST of mRNA_E_fasciculatus_S2_contig8913.17016.1 vs.
Match: Structural (maintenance of chromosomes protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CB22_SAPPC)

HSP 1 Score: 130 bits (328), Expect = 4.340e-30
Identity = 93/262 (35.50%), Postives = 144/262 (54.96%), Query Frame = 2
Query:    2 QGEVEQIAMMKPKGLTEHEDGLLEYLEDIIGSDRFVEAAEEAAKKVEELNDQRTEKLNRLKLAEKEKDSLEGDRQKADEFLRLDAAIRKKQNILYQFYMAHAATNVEKVMEKEEERKERLRHEKEKLASTLKEVEETKKIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMKHFKEQTKKLEAAVKKDTKRSKDSLARAAELEGSLDGLRRAVGQAEARKRTEDDALEEVNESLKGKTAELRGKLEGEQERVRPVRE 787
            QGEVEQIAMMK K   +H++GLLEYLEDIIGS+++V   EE  K V+ LN+ R EKLNR+++ EKEK++LE  + +A E+L  +  +  K NILYQ Y+  +  N+E+   K ++ KE+L  E E++A+   ++E   K +                                  +K  K+Q K+L AA  K+ ++    +   AE E ++  +  A+  AEA    E+  L+E+ ES KG+ A +R  LE +Q  + P ++
Sbjct:  238 QGEVEQIAMMKSKAENQHDEGLLEYLEDIIGSNQYVARTEEVMKDVDALNEARLEKLNRVRVVEKEKENLEDAKTEAQEYLEKERDVYLKTNILYQLYLRESTANLEECTLKRDKLKEKLDKESERMATHRAKLEVVSKEYKVVDDAFQKVKTDLDTVEAEFAEFEKRDVKVREDLKFSKKQAKELAAARAKEVEKHDGLVETMAEHEAAIPDVEVAIAAAEAALEKEEAVLDEILESHKGEAARMRVGLEEKQNALAPFQQ 499          
BLAST of mRNA_E_fasciculatus_S2_contig8913.17016.1 vs.
Match: Structural (maintenance of chromosomes protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GKU7_9STRA)

HSP 1 Score: 127 bits (318), Expect = 9.120e-29
Identity = 101/265 (38.11%), Postives = 143/265 (53.96%), Query Frame = 2
Query:    2 QGEVEQIAMMKPKGLTEHEDGLLEYLEDIIGSDRFVEAAEEAAKKVEELNDQRTEKLNRLKLAEKEKDSLEGDRQKADEFLRLDAAIRKKQNILYQFYMAHAATNVEKVMEKEEERKERLRHEKEKLASTLKEVEETKKIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMKHFKEQTKKLEAAVKKDTKRSKDSLARAAELEGSLDGLRRAVGQA--EARKRTEDDALEEVNESLKGKTAELRGKLEGEQERVRPVREE 790
            QGEVEQI++MKPK  + HE+GLLEYLE+IIGS++++EA EEA K VEEL   RTEKL R+K+ EKEK+SLE  + +A+EFL+ +A + +K++IL Q  +A A      ++EK E+   RL+ E+E  ++   E    ++                                    +K  + QTK LEAAV K  K  K  +A A                   E RK TE   LE + ESL+G+T+ LR  LE +Q+ + P+ EE
Sbjct:  190 QGEVEQISLMKPKAQSPHEEGLLEYLEEIIGSNKYLEAIEEATKSVEELTQSRTEKLGRVKVVEKEKESLEDAKNEAEEFLKKEAQLMQKRSILIQVKLAQAREAQATLLEKREKLAARLKEEEESASAATTESAAIEEAVAALRAEHKELSTALKKSQKEFAEMERKDIMFRENLKDAQAQTKDLEAAVAKLEKARKKHIAAAXXXXXXXXXXXXXXXXXLLEERKATEAK-LEALFESLQGETSNLRADLEAKQKNLAPLSEE 453          
BLAST of mRNA_E_fasciculatus_S2_contig8913.17016.1 vs.
Match: Structural (maintenance of chromosomes protein 4 n=1 Tax=Saitozyma podzolica TaxID=1890683 RepID=A0A427YRF3_9TREE)

HSP 1 Score: 127 bits (318), Expect = 9.330e-29
Identity = 92/259 (35.52%), Postives = 137/259 (52.90%), Query Frame = 2
Query:    2 QGEVEQIAMMKPKGLTEHEDGLLEYLEDIIGSDRFVEAAEEAAKKVEELNDQRTEKLNRLKLAEKEKDSLEGDRQKADEFLRLDAAIRKKQNILYQFYMAHAATNVEKVMEKEEERKERLRHEKEKLASTLKEVEETKKIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMKHFKEQTKKLEAAVKKDTKRSKDSLARAAELEGSLDGLRRAVGQAEARKRTEDDALEEVNESLKGKTAELRGKLEGEQERVRP 778
            QGEVE IA MK K   EHEDGLLEYLEDIIG+ ++ E  E+A+ +VE LN+QR EK+NRL++ E+EK +LE  +++A++FLR    + +K+++LYQF+M+   +N E   +  E     L  E+E+ A  L E+E+ +K +                                   KH   + KK + ++ +D     ++LA        LD  R  VG  E +  TE   LEE+ + LK KT E   K+E +Q  + P
Sbjct:  432 QGEVESIAQMKAKAQNEHEDGLLEYLEDIIGTTKYKEPIEQASLEVEALNEQRGEKMNRLRVVEREKAALEDKKREAEDFLRDSNELTRKKSLLYQFHMSTLNSNFEITTKAIESLGAELAEEQERNAGHLAEIEDLQKGYDDKRAAFEEVKQLVDQITKESKKYEKEEVTLLEKKKHLTTKQKKFKKSIAEDGHTRSEALASIENYSAELDVNRVKVGDLEKKLETEYAELEEIRDGLKDKTDEFTTKIEDKQRELEP 690          
BLAST of mRNA_E_fasciculatus_S2_contig8913.17016.1 vs.
Match: Structural (maintenance of chromosomes protein n=2 Tax=Trichosporon asahii var. asahii TaxID=189963 RepID=J6F151_TRIAS)

HSP 1 Score: 125 bits (315), Expect = 2.290e-28
Identity = 86/246 (34.96%), Postives = 138/246 (56.10%), Query Frame = 2
Query:    2 QGEVEQIAMMKPKGLTEHEDGLLEYLEDIIGSDRFVEAAEEAAKKVEELNDQRTEKLNRLKLAEKEKDSLEGDRQKADEFLRLDAAIRKKQNILYQFYMAHAATNVEKVMEKEEERKERLRHEKEKLASTLKEVEETKKIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMKHFKEQTKKLEAAVKKDTKRSKDSLARAAELEGSLDGLRRAVGQAEARKRTEDDALEEVNESLKGKTAEL 739
            QGEVE IA+MKPK   EHEDGLLEYLEDIIG+ ++ EA E+A+++VE LN++R EK+NRL++ E+EK +LE  +++A+++LR    + +K+++L+Q++M    +N+E   +  ++   +L  E+E+ A  L ++E+ +K +                                   KH   + KKL+ +V +D     ++L      EG L+  R  V   E +   E+  LEEV +SLK KT E 
Sbjct:  364 QGEVESIALMKPKAQNEHEDGLLEYLEDIIGTAKYKEAIEQASEEVEGLNEERGEKMNRLRVVEREKATLEDKKREAEDYLRDTNELTRKKSLLWQYHMHTLQSNIEITTKAIDQLNAQLAEEQERNAHHLAQIEDLQKGYDAKLADFEEVKRLTDALVKDAKKIEKEEVGLSEKKKHLVSKQKKLKKSVTEDGHARSEALGTVQNCEGQLETNRAKVADLEVKLEAEERELEEVRDSLKDKTDEF 609          
BLAST of mRNA_E_fasciculatus_S2_contig8913.17016.1 vs.
Match: Structural (maintenance of chromosomes protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GZ75_ACACA)

HSP 1 Score: 125 bits (314), Expect = 3.050e-28
Identity = 92/259 (35.52%), Postives = 140/259 (54.05%), Query Frame = 2
Query:    2 QGEVEQIAMMKPKGLTEHEDGLLEYLEDIIGSDRFVEAAEEAAKKVEELNDQRTEKLNRLKLAEKEKDSLEGDRQKADEFLRLDAAIRKKQNILYQFYMAHAATNVEKVMEKEEERKERLRHEKEKLASTLKEVEETKKIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMKHFKEQTKKLEAAVKKDTKRSKDSLARAAELEGSLDGLRRAVGQAEARKRTEDDALEEVNESLKGKTAELRGKLEGEQERVRP 778
            QGEVEQIAMMKPK  T+H+ G+LEYLEDIIGS  +VE  E+AA+ VE+LN++R EK+NR+K+AEKE+D LE  + +A E++  +  + +KQ++LYQ   + A T    V++K+ E + + + EKE++      +   +  +                                  +KH KE+ K L   +KK+ K+++  L          D     +GQ EA    E+  LE + ESLKG+TA L   +E +Q+   P
Sbjct:  161 QGEVEQIAMMKPKAQTQHDVGMLEYLEDIIGSIVYVEKIEKAAEMVEKLNEERNEKVNRVKVAEKERDHLEEAKNEAMEYVTKEKELLEKQSMLYQLRRSEADTKAAGVLKKKSEAEAKWKEEKERMNQLKAALNTKENEYKKEKDEFGRMAKEMGNAKAEWAVYERKHIQLEQDIKHLKEKRKTLAEEIKKNEKKAQXXLXDXXXXXXXXDECADELGQLEAAAAEEEAKLEVILESLKGETAGLHDAMEVKQKEFMP 419          
BLAST of mRNA_E_fasciculatus_S2_contig8913.17016.1 vs.
Match: Structural (maintenance of chromosomes protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HMZ4_SPIPD)

HSP 1 Score: 125 bits (313), Expect = 4.040e-28
Identity = 83/259 (32.05%), Postives = 136/259 (52.51%), Query Frame = 2
Query:    2 QGEVEQIAMMKPKGLTEHEDGLLEYLEDIIGSDRFVEAAEEAAKKVEELNDQRTEKLNRLKLAEKEKDSLEGDRQKADEFLRLDAAIRKKQNILYQFYMAHAATNVEKVMEKEEERKERLRHEKEKLASTLKEVEETKKIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMKHFKEQTKKLEAAVKKDTKRSKDSLARAAELEGSLDGLRRAVGQAEARKRTEDDALEEVNESLKGKTAELRGKLEGEQERVRP 778
            QGEVE I++MKPK   EHEDGLLEYLEDIIG+ R+ +  E+A K+++ELN++R+EKLNRLK  E++K SLE  R+ A++F+  +  ++KK+N LY  Y+A     +  +    E    +   E  +  +  +EV   ++ H                                    H +++ KKL +A+ K++ +  ++       +  ++      G+  +R   E+ ALE + ESLKGKT   + ++E +QE + P
Sbjct:  175 QGEVESISLMKPKAQNEHEDGLLEYLEDIIGTSRYKQPIEDANKQLDELNEERSEKLNRLKFVERDKKSLESKRKDAEDFIHTENLLKKKKNALYHIYLAECTLEIASLSSTIESLNVKQEGESRRFMTLKEEVNSLEERHSTIQNDYNTIAAKAKSVRDELQRYDRAEVELKEKEAHLQKKLKKLSSALHKESLQRSENETWIRNFDADMEKATMEAGELASRLAAEEKALETIRESLKGKTEVFQKQIEKKQEELAP 433          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8913.17016.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Structural2.140e-11795.44maintenance of chromosomes protein n=2 Tax=Ectocar... [more]
Structural1.620e-3538.78maintenance of chromosomes protein n=1 Tax=Leptocy... [more]
Structural3.320e-3234.98maintenance of chromosomes protein n=2 Tax=Fistuli... [more]
Structural3.200e-3045.04maintenance of chromosomes protein n=1 Tax=Tribone... [more]
Structural4.340e-3035.50maintenance of chromosomes protein n=2 Tax=Saprole... [more]
Structural9.120e-2938.11maintenance of chromosomes protein n=1 Tax=Hondaea... [more]
Structural9.330e-2935.52maintenance of chromosomes protein 4 n=1 Tax=Saito... [more]
Structural2.290e-2834.96maintenance of chromosomes protein n=2 Tax=Trichos... [more]
Structural3.050e-2835.52maintenance of chromosomes protein n=1 Tax=Acantha... [more]
Structural4.040e-2832.05maintenance of chromosomes protein n=2 Tax=Spizell... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8913contigE_fasciculatus_S2_contig8913:488..6148 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Stop1
Start0
Model size954
Hectar predicted targeting categoryother localisation
Exons8
Cds size492
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8913.17016.1prot_E_fasciculatus_S2_contig8913.17016.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8913 488..3449 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842545.767953-CDS-E_fasciculatus_S2_contig8913:487..6561696842545.767953-CDS-E_fasciculatus_S2_contig8913:487..656Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8913 488..656 +
1696842545.780079-CDS-E_fasciculatus_S2_contig8913:1782..19381696842545.780079-CDS-E_fasciculatus_S2_contig8913:1782..1938Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8913 1783..1938 +
1696842545.79193-CDS-E_fasciculatus_S2_contig8913:2329..24411696842545.79193-CDS-E_fasciculatus_S2_contig8913:2329..2441Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8913 2330..2441 +
1696842545.8020482-CDS-E_fasciculatus_S2_contig8913:3394..34491696842545.8020482-CDS-E_fasciculatus_S2_contig8913:3394..3449Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8913 3395..3449 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842545.8114018-UTR-E_fasciculatus_S2_contig8913:3449..35041696842545.8114018-UTR-E_fasciculatus_S2_contig8913:3449..3504Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8913 3450..3504 +
1696842545.820638-UTR-E_fasciculatus_S2_contig8913:4040..40931696842545.820638-UTR-E_fasciculatus_S2_contig8913:4040..4093Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8913 4041..4093 +
1696842545.8313498-UTR-E_fasciculatus_S2_contig8913:4807..49101696842545.8313498-UTR-E_fasciculatus_S2_contig8913:4807..4910Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8913 4808..4910 +
1696842545.8424718-UTR-E_fasciculatus_S2_contig8913:5185..52931696842545.8424718-UTR-E_fasciculatus_S2_contig8913:5185..5293Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8913 5186..5293 +
1696842545.8551276-UTR-E_fasciculatus_S2_contig8913:6007..61481696842545.8551276-UTR-E_fasciculatus_S2_contig8913:6007..6148Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8913 6008..6148 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8913.17016.1

>prot_E_fasciculatus_S2_contig8913.17016.1 ID=prot_E_fasciculatus_S2_contig8913.17016.1|Name=mRNA_E_fasciculatus_S2_contig8913.17016.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=164bp
PGRGGADRDDEAQGPDRARGRALGVPGGHHRIRPFRGGGGGGRQEGGGAQ
RPAHRKAQPAQAGREGEGLPGGGPAEGGRVPPPRRGYPQEAEHPVPVLHG
PRRHQRGKGDGKGGGEEGKAQAREGKAGQHPQGGGGDQEDPQTSVQRARE
ADSTDEAHERGVQ*
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mRNA from alignment at E_fasciculatus_S2_contig8913:488..6148+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8913.17016.1 ID=mRNA_E_fasciculatus_S2_contig8913.17016.1|Name=mRNA_E_fasciculatus_S2_contig8913.17016.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5661bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8913:488..6148+ (Ectocarpus fasciculatus EfasUO2)
CCAGGGAGAGGTGGAGCAGATCGCGATGATGAAGCCCAAGGGCCTGACCG AGCACGAGGACGGGCTCTTGGAGTACCTGGAGGACATCATCGGATCCGAC CGTTTCGTGGAGGCGGCGGAGGAGGCCGCCAAGAAGGTGGAGGAGCTCAA CGACCAGCGCACCGAAAAGGTGCGTACGTGATGCGGCAGCAGCAGTTAGT GGTCGGTTGGACACGCACGCGATTTTTAGTGATGGGGCTACCAGTGTGTC TGAGAGGGTATTAGCAGCCGTTAGTGGTGGTAAGGATACGCGCGTGTTTT ATTGGTGATGTGGCTACCAGTGTTTCTGAGAGGGTAGTAGCAGCAGTTAG TGATGGTAGGGCAAGAGCGCGTTTTGTAGTGTTGGGACTCTCAGTGTATC CGAAAAGGTACATATGTGCATCAGCAGTTGGTGGTGGACCGGGTCACCGA CTCCTTGTTTTCCGCGACACTCCCTGTGTGGCGACCACAGCATCAGGTGG CACGACCGCAATCGCGAGCGAATAGCCACGATGCGAGCTGCCCTGAAAAG GGACCACATTCCATCCTAACACTAAATACTGTAGGGTTCGTCGCTAAACT GGGCCCAGCACTGCTGTTAGTGTGTTTCTATTTCATGGCAGTCGGAGGGG TCCGTTCAAGGGTGAGGTTTGTCGGTGGCGGGAAGACCTTGCAGGTCCGC CCGGGGTCAGCATCCTAGCCCACACTTGGAGAGAAGATTTTAATTGTGCC TCCTTTAGCTTGCATTTCTCGTCTGGTCGACATCCAGCTCAACCGGCTTA AGCTTAGCCGAGGAGGAGAAGACTCTTGTTTTGGCGCTGACACGGCAGGG CATTTAGTGCACTCTTACCCCCAAGAAGGAACAAATAAAGGTACAGCAGT CGTGGCTTCGATACAAGAGGGTGGTGTGGTGTGACAAAGGCCCCCGACCG ATAAATATCGGAGCCAGCCCCCTATTATACCGGAATAGGGAGTACTCAAT CATTCTATATTACCCTCCCCACAACCAAAATAAAAATATTACCAAATACA ATCCCAAACCCCAAAACAATCCCTAGGCCAAAAACAATAACAATTAACTA AATAAAACAACCCACATATATATATTATATATAGAGGCTCGGGTCCGTGA CAACCGTATGTTATATATAGAGGCTCGAGTCCGTGACAACCGATTTTGAT TGACCCTCTTACATCGGAGCCACGACTGCATGCATATAAAATACTCACGT TTGTACCTCGTTTTGTTCGTGTTTCGTCTGGTCCGCCCACGCCAGCTCAA CCGGCTCAAGCTGGCCGAGAAGGAGAAGGACTCCCTGGAGGGGGACCGGC AGAAGGCGGACGAGTTCCTCCGCCTCGACGCGGCTATCCGCAAGAAGCAG AACATCCTGTACCAGTTCTACATGGCCCACGCCGCCACCAACGTGGAAAA GGTGTGCATGTGTAACTGCTACAATAATTGTTCTGGGGATGAGATCCGGG GCGACTGCTTGTGTAACTGTTTTGTGTATCTGCAAAAGCGTGGCATGAGA TAGATCCAGGGTGACTGCTTCAATGCGGTGTGCCGAGTTGTTGTTGTTGC TGGTTGAGATCCAGGGTGATTATTATTATTGCGGTGTGCGGAGTTGTTGC TGCTGCTGTTGGTTTTGTTTGTTGTCGTTGTTGTCGTTGTTGCTGTTGTC GTTTGTGCTGCAGCTGTTGTTGCTGAAGCTGCTGTTTTGTTTGCTGTTTC TGATGTTGTTGTTGTTGCTGCTGCTGCTGCTGCTGTTTTGTTTCCTGTGC TTCGATTTCATCCCCCTCACCCCTCCAATTGTCGGTCTGTAGGTGATGGA AAAGGAGGAGGAGAGGAAGGAAAGGCTCAGGCACGAGAAGGAAAAGCTGG CCAGCACCCTCAAGGAGGTGGAGGAGACCAAGAAGATCCACAAACGAGTG TCCAGTGAGCTACCGTGCATGCAGTAGAGGTTCCCTTATAGTACCGGTAT ATGTGTGTGTCCAGAGGTTTGATCGGCACTACTACTATTATTATCCTGTA CCCCATACCGGCAGTATTAAAAAAAGTACGTGAACATTGTGATTCAGTCT GTGCCGACGGAAAGCACCGGCACTATCAACCGTATGTTCAGCAGTATGTC AACAAGTATATCTTCGAGAAGCTTATCTGTATGGATGGATGGATGGATGG GTGATTGAGAATTGTTGTTGTTGTGCCCATGCCACAAACAGATGCCTCTG CTGATCGTCCTACCAGTCCTACTGATGCCTGAGGAGACGTATGTTGTTGT TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG TTGTTGTTGTTGTCTTCACATTAAATACCGTTCCGATCTATCCATCCAGT ACCTTCTTATGTCCGTACTAGTCTAACACTTGACGCGGTCGATTCCCGTG GTCACAGGCTAACTAACCTACCCATAAAAAGGTATACTAAAAATAATGGC TCCGATCTCGCTACCCAGTACCCTCATATGTCCGTACTAGTCTAACGATT GACGCGGTCGATTCCCGTGGTCACAGGCTAACTTACCTACCCAGAAAAGG CGTATGCTCGAAGTTATGACTTGGTGTGGTTTTCAAGGAATGCTACGTCT CCACGATAGCTAATGTGTCCGCATCGTCGTCGTTGTTGTGGTGATGCTGC AGCCGTGGGATTGACGTTGATGTTGTATGTGGCTAACTACAATGCTGGTT GTGGTGCTGTGCGGTGTCGGTGAGGCTGATCTTGATGGTGGTGTTTTTGG TGTGGTTGATGGTCTAGCTGTGGGATAGTGTTGCTTCCACAGCGGTGCCG TTGTCGTCCTTGCTGTGGTTGACGTCGATTGTCTTCATCTTCTTCTTCTT GCTGCAGGAGAGCACGAGAAGCTGACAGCACAGATGAAGCGCACGAAAGA GGAGTTCAATGAATACGAGCGCAAGGACATTCAGCACCAGGAAGGCATGA AACACTTCAAGGAGCAGGTATGATGGAGGTTTTTTTCGGCCCAGGCATGT TCTTCGTCTGTCGATTCGGGATGAATCGCTTGCACGGAGCAGCGATGACG CTACATGGTGTTTGACATTTAGCCCGTCGTTTTTTTTTGGTGTGAAGAGC TTCCAAGACCAAGGTCTGAGTTGTTATATCCCCACTTGATCAGCAGTCGT TCGTAGGGATGGCAAACGTGAACGTGGAGTCTTAATGTGTGTGTGTTTTG TTTCCGCGATTGCATCTTGGTCGCGCCCTCACTGACCAATGACAATGCGC CAGTCTTGTATTTATCAGGGTTGGAAAACAAACACGAAGACGCCGCTGTC TATTATGTTTGTGTTAGTTTACGCGAGTAAAATTTGCTCGCGTCTGCACT GCCGTCAGCGCTAACGAGATGACCAATGACCATACGTCAGTCTTGTAGCG AGACAAACAAAAACGCGAATTGCTCTTGATTGTAATTCGTGTCTTGTGCG ATTGTACAATTGTAATTTGGTCGCGTCCGCGCTGCCGTGACGACACGACA CAGACGAAGAAGCTAGAGGCGGCCGTCAAGAAGGACACCAAGCGCTCCAA AGACAGGTATGCACGACACCAGCGCTGGCGGCACTCTAATAGATTAGCAG CTGCGAGGCGGTAGCCGTAGGGAATGCCGCCGCAGCAATATTGTAGCAGC GACCCTGTTTGAGCTAGTGCCACGCTTGTGGTTAGGCCGCACGATAGCGA GAGCCATCTACATTGTACCAAGAATAGTATAGTATTCTAAATAGGAATAG TTGAAGATGGAGCGTGCCGCTTGAGCTTGGTTGGTGCATCATGGGTCCGA CTCGTCTGCGATAGTTGTATACATGGTAGGACTGCTGTGTTTCGAGGTTA CATTGAGGTGTTATGTTTCCATGCGCAAGTCCTCTGGGGCAAGGGGCACA AAATTGAAGGTTTTCTTGTCTGGGTACTGTACACTGCTGTACACCCATCG TAAAGAACGCTCTCATGGAGTCCGCCCCGGTGGCGCTAAAGAGCGCCATC GTCGACGTCGGGGCAACGGTGTTGGTGGCCGCCTTGAGCGCCATTCTGCT TACTAACGCTCGGGACATGGACAGCTCCGCCGGCTTGGCCACCCAGGGCG GCAATGGCGACGGCGACATGTGTATTTTCTACCACGCTTACGTGGTCGCG GCCGTGACTTCCCCCACTCTGTAGAGCCGTCGATAGTAGCGTGCTTGGTT AAAAAGTATCGTGCGCCGACTTTCCTGTGATGTTTGTCCTGTCTTTTTGT TGTTCGGGTGGTGCCTGCAGCCTGGCGAGGGCGGCGGAGCTGGAGGGCAG CCTGGACGGGCTCCGTCGCGCCGTGGGCCAAGCGGAGGCAAGGAAGAGGA CGGAGGACGACGCCCTCGAAGAGGTAACGGTAACGAGAAATGCTTGCTTT CGCCACACGACTTGTAGGCGTGTTCGGTTGTTTGACCGCAGGGGTGTTCA CTCATGTGAAGGCATGCTGTTGTCGGCAGACCATGGACCGCAGAGGGGAG GGCTGTTGCGCGCCGCCGCTAGTTTTTTGGAAGGCCATGTACACGTGTAT GCATGCGCACTTTTACGCGAGTGTCGTGCTTTCTCTCGTCATAAATGCGC TCAACGTCTCAAGCACGCACGCACGCACGCACGCTTGTTCCCAACCAGGT GAACGAGAGCCTAAAGGGCAAGACGGCGGAGCTCCGCGGCAAGCTGGAGG GGGAGCAGGAACGGGTCCGGCCAGTCCGGGAGGAAACCGATGCCCTCAGG AACAAGGTACAAACTACAATGACATGAAGTCGGTTTGTCGCTTTGAGAAC ATTCGTGTGCTCTCTCCAACAACAGGTTTCCTTAACTGCTTTGAGGGCAC TCATGTTTTTTCTCCAATGACAGGTTGCATCCTTAAAGCCAAGAAGCGTC GTAATATTGTATCAACCCCCCACTTTGCTCGTACATTCTGCGATCCGCCA TGCTTGTGAAAAATGTGTGGTGTCATGGCGTCGTTTGTGGCGAGGGAGTG TCGTTACAGCGGAGATGACTGCGCTGTTTGGCGAAATGCGTCGAAGATAC CAGTAGACCGCATGATGTGCGGCGGTCCGTTTTTTGTGTTGGACTGACCT TTTACGTGGTCTCTCCGGCTGCTTTGTCCGTTTCTTTTTTCTTTTTTCTC CATTTTATGGCATCTACCTCCGGCAGCGAACCCCGTTGTCTGTGGGCGTC CCTCTTCCTTGCTTTGGTCGTCTTTTCTCGTTTTTTTCCGCTACGGTGTG ACCCTGGATGGTTATAGCTACTCCGAAAACATGCACTGAAAAGTGTAGTA CACGTCTCACCAGGGGACATGGGGGGACGAAAACACTACGGTGGCGCCTG CCTTCCTTCCTTCTCGCCTGCCTGTCTTGGTGGTTGTGGATTTCCTTACC TCTCTGGTCTTAACCTTGTCACCGCGATGGGGCCTGCCTTCCTTCTTGCC TTCCCTTCCTGTCCGGGCAGGTGGACACGTGCAAGTGCGAGATCAAGCTG GTGCGCGAGTCGACGGAGAGCGCGAAGAAGAGGCTGAAGGACGCGGAAGC TGCCCTGGAAAAGCTCCTAGAGAAGGCGGAGGCGGACAAGGGGGAGCTCG CCGACGCAAAG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8913:488..6148+

>mRNA_E_fasciculatus_S2_contig8913.17016.1 ID=mRNA_E_fasciculatus_S2_contig8913.17016.1|Name=mRNA_E_fasciculatus_S2_contig8913.17016.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=492bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8913:488..6148+ (Ectocarpus fasciculatus EfasUO2)
CCAGGGAGAGGTGGAGCAGATCGCGATGATGAAGCCCAAGGGCCTGACCG
AGCACGAGGACGGGCTCTTGGAGTACCTGGAGGACATCATCGGATCCGAC
CGTTTCGTGGAGGCGGCGGAGGAGGCCGCCAAGAAGGTGGAGGAGCTCAA
CGACCAGCGCACCGAAAAGCTCAACCGGCTCAAGCTGGCCGAGAAGGAGA
AGGACTCCCTGGAGGGGGACCGGCAGAAGGCGGACGAGTTCCTCCGCCTC
GACGCGGCTATCCGCAAGAAGCAGAACATCCTGTACCAGTTCTACATGGC
CCACGCCGCCACCAACGTGGAAAAGGTGATGGAAAAGGAGGAGGAGAGGA
AGGAAAGGCTCAGGCACGAGAAGGAAAAGCTGGCCAGCACCCTCAAGGAG
GTGGAGGAGACCAAGAAGATCCACAAACGAGTGTCCAGAGAGCACGAGAA
GCTGACAGCACAGATGAAGCGCACGAAAGAGGAGTTCAATGA
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