mRNA_E_fasciculatus_S2_contig8913.17016.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8913.17016.1 vs.
Match: Structural (maintenance of chromosomes protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ01_ECTSI) HSP 1 Score: 378 bits (971), Expect = 2.140e-117 Identity = 251/263 (95.44%), Postives = 260/263 (98.86%), Query Frame = 2
Query: 2 QGEVEQIAMMKPKGLTEHEDGLLEYLEDIIGSDRFVEAAEEAAKKVEELNDQRTEKLNRLKLAEKEKDSLEGDRQKADEFLRLDAAIRKKQNILYQFYMAHAATNVEKVMEKEEERKERLRHEKEKLASTLKEVEETKKIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMKHFKEQTKKLEAAVKKDTKRSKDSLARAAELEGSLDGLRRAVGQAEARKRTEDDALEEVNESLKGKTAELRGKLEGEQERVRPVREE 790
QGEVEQIAMMKPKGLTEHEDGLLEYLEDIIGSDRFVEAAEEAA++VEELNDQRTEKLNRLKLAEKEKDSLEGD+QKA EFLRLDAAIRKKQNILYQ MAHAATNVEKVMEKEEERKERLRHE+EKLASTLKE+EETKK+HXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMKHFKEQTKKLEAA+KKDTKRSKDSLARAAELEGSLDGLRRAVGQAEARK+TED+ALEEVNESLKGKTAELRGKLEGEQERVRPVREE
Sbjct: 235 QGEVEQIAMMKPKGLTEHEDGLLEYLEDIIGSDRFVEAAEEAARRVEELNDQRTEKLNRLKLAEKEKDSLEGDKQKAYEFLRLDAAIRKKQNILYQSNMAHAATNVEKVMEKEEERKERLRHEREKLASTLKELEETKKVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMKHFKEQTKKLEAAIKKDTKRSKDSLARAAELEGSLDGLRRAVGQAEARKKTEDEALEEVNESLKGKTAELRGKLEGEQERVRPVREE 497
BLAST of mRNA_E_fasciculatus_S2_contig8913.17016.1 vs.
Match: Structural (maintenance of chromosomes protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JYQ7_9STRA) HSP 1 Score: 146 bits (369), Expect = 1.620e-35 Identity = 102/263 (38.78%), Postives = 150/263 (57.03%), Query Frame = 2
Query: 2 QGEVEQIAMMKPKGLTEHEDGLLEYLEDIIGSDRFVEAAEEAAKKVEELNDQRTEKLNRLKLAEKEKDSLEGDRQKADEFLRLDAAIRKKQNILYQFYMAHAATNVEKVMEKEEERKERLRHEKEKLASTLKEVEETKKIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMKHFKEQTKKLEAAVKKDTKRSKDSLARAAELEGSLDGLRRAVGQAEARKRTEDDALEEVNESLKGKTAELRGKLEGEQERVRPVREE 790
QGEVE I+MM PKG TE+++GLLEYLEDIIGS+++V A EAA+KVE LN+QR E+LNR+K EKEKDSLEG + +A+ L + IR+K+NIL+Q + ++EKV +E E+L E+ KL + V E + H +KH K KKLEA ++K++++++ S +A E S+ L + + K ED LE++ E +KG T LR +LE + + + PV++E
Sbjct: 169 QGEVEMISMMAPKGKTENDEGLLEYLEDIIGSNKYVADATEAAEKVESLNEQRQERLNRVKAVEKEKDSLEGAKLEAEGLLGKEREIRRKKNILFQINASEITRDLEKVNSHRDELVEKLEEERSKLKAASDRVAEIEAGHKEQASEYEELHRQALKTKEDFTAYERRDIKMREDIKHLKSLKKKLEAKIRKESEKAEKSSNKAIAAEESIPELEKRIEALTEGKAIEDAKLEKIYEDMKGVTEGLRLELEQKTQELAPVQQE 431
BLAST of mRNA_E_fasciculatus_S2_contig8913.17016.1 vs.
Match: Structural (maintenance of chromosomes protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JL04_FISSO) HSP 1 Score: 137 bits (344), Expect = 3.320e-32 Identity = 92/263 (34.98%), Postives = 148/263 (56.27%), Query Frame = 2
Query: 2 QGEVEQIAMMKPKGLTEHEDGLLEYLEDIIGSDRFVEAAEEAAKKVEELNDQRTEKLNRLKLAEKEKDSLEGDRQKADEFLRLDAAIRKKQNILYQFYMAHAATNVEKVMEKEEERKERLRHEKEKLASTLKEVEETKKIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMKHFKEQTKKLEAAVKKDTKRSKDSLARAAELEGSLDGLRRAVGQAEARKRTEDDALEEVNESLKGKTAELRGKLEGEQERVRPVREE 790
QGEVE I+MM PKG TEH++GLLEYLEDIIGS++FVE AA+K E L QR+EKLNR+K AEKEKD+LE + +A++ L ++ IR+++NILYQ K+ E++E + +++ E L ++ ++E + +KHFK+Q K L+A + + ++ ++A+ E E S+ + RA+ + K ED+ LE++ + +KG T LR +L+ + + + P+ +E
Sbjct: 179 QGEVEMISMMPPKGKTEHDEGLLEYLEDIIGSNKFVEETNLAAEKAEVLTGQRSEKLNRVKAAEKEKDALESAKVEAEQLLGIEREIRRQKNILYQINQLQVDREAAKLNEEKENVQSQIQALGEDLRASNDRIKEIESGLSEQRKEYELIYDELTKTKEEFAAYERRDIKVREEIKHFKKQKKSLQAKISSEAEKEASAIAKGKEAEESIPEIERAICDVKESKAVEDEKLEKIYDEIKGITQNLRTELDQKTQELAPILQE 441
BLAST of mRNA_E_fasciculatus_S2_contig8913.17016.1 vs.
Match: Structural (maintenance of chromosomes protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YML7_9STRA) HSP 1 Score: 131 bits (329), Expect = 3.200e-30 Identity = 118/262 (45.04%), Postives = 154/262 (58.78%), Query Frame = 2
Query: 2 QGEVEQIAMMKPKGLTEHEDGLLEYLEDIIGSDRFVEAAEEAAKKVEELNDQRTEKLNRLKLAEKEKDSLEGDRQKADEFLRLDAAIRKKQNILYQFYMAHAATNVEKVMEKEEERKERLRHEKEKLASTLKEVEETKKIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMKHFKEQTKKLEAAVKKDTKRSKDSLARAAELEGSLDGLRRAVGQAEARKRTEDDALEEVNESLKGKTAELRGKLEGEQERVRPVRE 787
QGEVEQIAMMKPK H++GLLEYLEDIIGS+R VEA E AAK+VEE ++ R E+LNRLK AEKEK++LEG + +A+ FL+ + +RK +N+LYQ +A A N +V + EE E+ +LA T XXXXXXXXXXXXXXXXXX +K+ + Q KKLEAA K+D K + +++ARA E +L L A +AE + +T ELR +LE +Q P E
Sbjct: 190 QGEVEQIAMMKPKAEGPHDEGLLEYLEDIIGSNRHVEATEAAAKEVEERSEARAERLNRLKAAEKEKEALEGAKSEAEAFLQKERDLRKLRNVLYQICIAEAEGNAAEVAARREELARLQGVERARLAETEXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEFAEYERKDIKYQEDLKYLRAQIKKLEAAAKRDAKAAAEAVARAEASEAALPDLEAARTRAEKXXXXXXXXXXXXXXXARDETEELRSELEAKQAEAAPAAE 451
BLAST of mRNA_E_fasciculatus_S2_contig8913.17016.1 vs.
Match: Structural (maintenance of chromosomes protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CB22_SAPPC) HSP 1 Score: 130 bits (328), Expect = 4.340e-30 Identity = 93/262 (35.50%), Postives = 144/262 (54.96%), Query Frame = 2
Query: 2 QGEVEQIAMMKPKGLTEHEDGLLEYLEDIIGSDRFVEAAEEAAKKVEELNDQRTEKLNRLKLAEKEKDSLEGDRQKADEFLRLDAAIRKKQNILYQFYMAHAATNVEKVMEKEEERKERLRHEKEKLASTLKEVEETKKIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMKHFKEQTKKLEAAVKKDTKRSKDSLARAAELEGSLDGLRRAVGQAEARKRTEDDALEEVNESLKGKTAELRGKLEGEQERVRPVRE 787
QGEVEQIAMMK K +H++GLLEYLEDIIGS+++V EE K V+ LN+ R EKLNR+++ EKEK++LE + +A E+L + + K NILYQ Y+ + N+E+ K ++ KE+L E E++A+ ++E K + +K K+Q K+L AA K+ ++ + AE E ++ + A+ AEA E+ L+E+ ES KG+ A +R LE +Q + P ++
Sbjct: 238 QGEVEQIAMMKSKAENQHDEGLLEYLEDIIGSNQYVARTEEVMKDVDALNEARLEKLNRVRVVEKEKENLEDAKTEAQEYLEKERDVYLKTNILYQLYLRESTANLEECTLKRDKLKEKLDKESERMATHRAKLEVVSKEYKVVDDAFQKVKTDLDTVEAEFAEFEKRDVKVREDLKFSKKQAKELAAARAKEVEKHDGLVETMAEHEAAIPDVEVAIAAAEAALEKEEAVLDEILESHKGEAARMRVGLEEKQNALAPFQQ 499
BLAST of mRNA_E_fasciculatus_S2_contig8913.17016.1 vs.
Match: Structural (maintenance of chromosomes protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GKU7_9STRA) HSP 1 Score: 127 bits (318), Expect = 9.120e-29 Identity = 101/265 (38.11%), Postives = 143/265 (53.96%), Query Frame = 2
Query: 2 QGEVEQIAMMKPKGLTEHEDGLLEYLEDIIGSDRFVEAAEEAAKKVEELNDQRTEKLNRLKLAEKEKDSLEGDRQKADEFLRLDAAIRKKQNILYQFYMAHAATNVEKVMEKEEERKERLRHEKEKLASTLKEVEETKKIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMKHFKEQTKKLEAAVKKDTKRSKDSLARAAELEGSLDGLRRAVGQA--EARKRTEDDALEEVNESLKGKTAELRGKLEGEQERVRPVREE 790
QGEVEQI++MKPK + HE+GLLEYLE+IIGS++++EA EEA K VEEL RTEKL R+K+ EKEK+SLE + +A+EFL+ +A + +K++IL Q +A A ++EK E+ RL+ E+E ++ E ++ +K + QTK LEAAV K K K +A A E RK TE LE + ESL+G+T+ LR LE +Q+ + P+ EE
Sbjct: 190 QGEVEQISLMKPKAQSPHEEGLLEYLEEIIGSNKYLEAIEEATKSVEELTQSRTEKLGRVKVVEKEKESLEDAKNEAEEFLKKEAQLMQKRSILIQVKLAQAREAQATLLEKREKLAARLKEEEESASAATTESAAIEEAVAALRAEHKELSTALKKSQKEFAEMERKDIMFRENLKDAQAQTKDLEAAVAKLEKARKKHIAAAXXXXXXXXXXXXXXXXXLLEERKATEAK-LEALFESLQGETSNLRADLEAKQKNLAPLSEE 453
BLAST of mRNA_E_fasciculatus_S2_contig8913.17016.1 vs.
Match: Structural (maintenance of chromosomes protein 4 n=1 Tax=Saitozyma podzolica TaxID=1890683 RepID=A0A427YRF3_9TREE) HSP 1 Score: 127 bits (318), Expect = 9.330e-29 Identity = 92/259 (35.52%), Postives = 137/259 (52.90%), Query Frame = 2
Query: 2 QGEVEQIAMMKPKGLTEHEDGLLEYLEDIIGSDRFVEAAEEAAKKVEELNDQRTEKLNRLKLAEKEKDSLEGDRQKADEFLRLDAAIRKKQNILYQFYMAHAATNVEKVMEKEEERKERLRHEKEKLASTLKEVEETKKIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMKHFKEQTKKLEAAVKKDTKRSKDSLARAAELEGSLDGLRRAVGQAEARKRTEDDALEEVNESLKGKTAELRGKLEGEQERVRP 778
QGEVE IA MK K EHEDGLLEYLEDIIG+ ++ E E+A+ +VE LN+QR EK+NRL++ E+EK +LE +++A++FLR + +K+++LYQF+M+ +N E + E L E+E+ A L E+E+ +K + KH + KK + ++ +D ++LA LD R VG E + TE LEE+ + LK KT E K+E +Q + P
Sbjct: 432 QGEVESIAQMKAKAQNEHEDGLLEYLEDIIGTTKYKEPIEQASLEVEALNEQRGEKMNRLRVVEREKAALEDKKREAEDFLRDSNELTRKKSLLYQFHMSTLNSNFEITTKAIESLGAELAEEQERNAGHLAEIEDLQKGYDDKRAAFEEVKQLVDQITKESKKYEKEEVTLLEKKKHLTTKQKKFKKSIAEDGHTRSEALASIENYSAELDVNRVKVGDLEKKLETEYAELEEIRDGLKDKTDEFTTKIEDKQRELEP 690
BLAST of mRNA_E_fasciculatus_S2_contig8913.17016.1 vs.
Match: Structural (maintenance of chromosomes protein n=2 Tax=Trichosporon asahii var. asahii TaxID=189963 RepID=J6F151_TRIAS) HSP 1 Score: 125 bits (315), Expect = 2.290e-28 Identity = 86/246 (34.96%), Postives = 138/246 (56.10%), Query Frame = 2
Query: 2 QGEVEQIAMMKPKGLTEHEDGLLEYLEDIIGSDRFVEAAEEAAKKVEELNDQRTEKLNRLKLAEKEKDSLEGDRQKADEFLRLDAAIRKKQNILYQFYMAHAATNVEKVMEKEEERKERLRHEKEKLASTLKEVEETKKIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMKHFKEQTKKLEAAVKKDTKRSKDSLARAAELEGSLDGLRRAVGQAEARKRTEDDALEEVNESLKGKTAEL 739
QGEVE IA+MKPK EHEDGLLEYLEDIIG+ ++ EA E+A+++VE LN++R EK+NRL++ E+EK +LE +++A+++LR + +K+++L+Q++M +N+E + ++ +L E+E+ A L ++E+ +K + KH + KKL+ +V +D ++L EG L+ R V E + E+ LEEV +SLK KT E
Sbjct: 364 QGEVESIALMKPKAQNEHEDGLLEYLEDIIGTAKYKEAIEQASEEVEGLNEERGEKMNRLRVVEREKATLEDKKREAEDYLRDTNELTRKKSLLWQYHMHTLQSNIEITTKAIDQLNAQLAEEQERNAHHLAQIEDLQKGYDAKLADFEEVKRLTDALVKDAKKIEKEEVGLSEKKKHLVSKQKKLKKSVTEDGHARSEALGTVQNCEGQLETNRAKVADLEVKLEAEERELEEVRDSLKDKTDEF 609
BLAST of mRNA_E_fasciculatus_S2_contig8913.17016.1 vs.
Match: Structural (maintenance of chromosomes protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GZ75_ACACA) HSP 1 Score: 125 bits (314), Expect = 3.050e-28 Identity = 92/259 (35.52%), Postives = 140/259 (54.05%), Query Frame = 2
Query: 2 QGEVEQIAMMKPKGLTEHEDGLLEYLEDIIGSDRFVEAAEEAAKKVEELNDQRTEKLNRLKLAEKEKDSLEGDRQKADEFLRLDAAIRKKQNILYQFYMAHAATNVEKVMEKEEERKERLRHEKEKLASTLKEVEETKKIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMKHFKEQTKKLEAAVKKDTKRSKDSLARAAELEGSLDGLRRAVGQAEARKRTEDDALEEVNESLKGKTAELRGKLEGEQERVRP 778
QGEVEQIAMMKPK T+H+ G+LEYLEDIIGS +VE E+AA+ VE+LN++R EK+NR+K+AEKE+D LE + +A E++ + + +KQ++LYQ + A T V++K+ E + + + EKE++ + + + +KH KE+ K L +KK+ K+++ L D +GQ EA E+ LE + ESLKG+TA L +E +Q+ P
Sbjct: 161 QGEVEQIAMMKPKAQTQHDVGMLEYLEDIIGSIVYVEKIEKAAEMVEKLNEERNEKVNRVKVAEKERDHLEEAKNEAMEYVTKEKELLEKQSMLYQLRRSEADTKAAGVLKKKSEAEAKWKEEKERMNQLKAALNTKENEYKKEKDEFGRMAKEMGNAKAEWAVYERKHIQLEQDIKHLKEKRKTLAEEIKKNEKKAQXXLXDXXXXXXXXDECADELGQLEAAAAEEEAKLEVILESLKGETAGLHDAMEVKQKEFMP 419
BLAST of mRNA_E_fasciculatus_S2_contig8913.17016.1 vs.
Match: Structural (maintenance of chromosomes protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HMZ4_SPIPD) HSP 1 Score: 125 bits (313), Expect = 4.040e-28 Identity = 83/259 (32.05%), Postives = 136/259 (52.51%), Query Frame = 2
Query: 2 QGEVEQIAMMKPKGLTEHEDGLLEYLEDIIGSDRFVEAAEEAAKKVEELNDQRTEKLNRLKLAEKEKDSLEGDRQKADEFLRLDAAIRKKQNILYQFYMAHAATNVEKVMEKEEERKERLRHEKEKLASTLKEVEETKKIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMKHFKEQTKKLEAAVKKDTKRSKDSLARAAELEGSLDGLRRAVGQAEARKRTEDDALEEVNESLKGKTAELRGKLEGEQERVRP 778
QGEVE I++MKPK EHEDGLLEYLEDIIG+ R+ + E+A K+++ELN++R+EKLNRLK E++K SLE R+ A++F+ + ++KK+N LY Y+A + + E + E + + +EV ++ H H +++ KKL +A+ K++ + ++ + ++ G+ +R E+ ALE + ESLKGKT + ++E +QE + P
Sbjct: 175 QGEVESISLMKPKAQNEHEDGLLEYLEDIIGTSRYKQPIEDANKQLDELNEERSEKLNRLKFVERDKKSLESKRKDAEDFIHTENLLKKKKNALYHIYLAECTLEIASLSSTIESLNVKQEGESRRFMTLKEEVNSLEERHSTIQNDYNTIAAKAKSVRDELQRYDRAEVELKEKEAHLQKKLKKLSSALHKESLQRSENETWIRNFDADMEKATMEAGELASRLAAEEKALETIRESLKGKTEVFQKQIEKKQEELAP 433 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8913.17016.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8913.17016.1 >prot_E_fasciculatus_S2_contig8913.17016.1 ID=prot_E_fasciculatus_S2_contig8913.17016.1|Name=mRNA_E_fasciculatus_S2_contig8913.17016.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=164bp PGRGGADRDDEAQGPDRARGRALGVPGGHHRIRPFRGGGGGGRQEGGGAQback to top mRNA from alignment at E_fasciculatus_S2_contig8913:488..6148+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8913.17016.1 ID=mRNA_E_fasciculatus_S2_contig8913.17016.1|Name=mRNA_E_fasciculatus_S2_contig8913.17016.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5661bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8913:488..6148+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8913:488..6148+ >mRNA_E_fasciculatus_S2_contig8913.17016.1 ID=mRNA_E_fasciculatus_S2_contig8913.17016.1|Name=mRNA_E_fasciculatus_S2_contig8913.17016.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=492bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8913:488..6148+ (Ectocarpus fasciculatus EfasUO2)back to top |