prot_E_fasciculatus_S2_contig8872.16976.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig8872.16976.1
Unique Name	prot_E_fasciculatus_S2_contig8872.16976.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	64

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig8872.16976.1 vs. uniprot
Match: D8LPW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPW3_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 2.760e-34
Identity = 63/64 (98.44%), Postives = 63/64 (98.44%), Query Frame = 0

Query:    1 AVLKVIHCDHPDDKTGPKLEASFEMDDVKMDFRAEQYEQALSLKDSIAALANWQTFFPYRPKTT 64
            AVLKVIHCDHPDDKTGPKLEASFEMDDVKMDFRAEQYEQALSLKDSIAALANWQTFFPYRPK T
Sbjct:  242 AVLKVIHCDHPDDKTGPKLEASFEMDDVKMDFRAEQYEQALSLKDSIAALANWQTFFPYRPKAT 305

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BLAST of mRNA_E_fasciculatus_S2_contig8872.16976.1 vs. uniprot
Match: A0A6H5K5U0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5U0_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 4.530e-34
Identity = 62/64 (96.88%), Postives = 62/64 (96.88%), Query Frame = 0

Query:    1 AVLKVIHCDHPDDKTGPKLEASFEMDDVKMDFRAEQYEQALSLKDSIAALANWQTFFPYRPKTT 64
            AVLKVIHCDHPDDKTGPK E SFEMDDVKMDFRAEQYEQALSLKDSIAALANWQTFFPYRPKTT
Sbjct:  246 AVLKVIHCDHPDDKTGPKFEVSFEMDDVKMDFRAEQYEQALSLKDSIAALANWQTFFPYRPKTT 309

[Close]

BLAST of mRNA_E_fasciculatus_S2_contig8872.16976.1 vs. uniprot
Match: A0A6H5JC24_9PHAE (VPS13 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC24_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 4.540e-32
Identity = 58/64 (90.62%), Postives = 58/64 (90.62%), Query Frame = 0

Query:    1 AVLKVIHCDHPDDKTGPKLEASFEMDDVKMDFRAEQYEQALSLKDSIAALANWQTFFPYRPKTT 64
            AVLK IH D PDDKTGPK EASFEMDDVKMDFRAEQYEQALSLKDS AALANWQ FFPYRPKTT
Sbjct:  137 AVLKFIHSDDPDDKTGPKFEASFEMDDVKMDFRAEQYEQALSLKDSAAALANWQMFFPYRPKTT 200

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig8872.16976.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig8872.16976.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D8LPW3_ECTSI	2.760e-34	98.44	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K5U0_9PHAE	4.530e-34	96.88	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JC24_9PHAE	4.540e-32	90.63	VPS13 domain-containing protein n=1 Tax=Ectocarpus...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR031646	Vacuolar protein sorting-associated protein 13, second N-terminal domain	PFAM	PF16908	VPS13	coord: 11..63 e-value: 2.3E-8 score: 34.2

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig8872	contig	E_fasciculatus_S2_contig8872:643..1368 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig8872.16976.1	mRNA_E_fasciculatus_S2_contig8872.16976.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig8872 641..1368 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig8872.16976.1 ID=prot_E_fasciculatus_S2_contig8872.16976.1|Name=mRNA_E_fasciculatus_S2_contig8872.16976.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=64bp
AVLKVIHCDHPDDKTGPKLEASFEMDDVKMDFRAEQYEQALSLKDSIAAL
ANWQTFFPYRPKTT

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR031646	VPS13_N2