prot_E_fasciculatus_S2_contig8856.16955.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig8856.16955.1
Unique Name	prot_E_fasciculatus_S2_contig8856.16955.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	123

Homology

[Close]

BLAST of mRNA_E_fasciculatus_S2_contig8856.16955.1 vs. uniprot
Match: D7FYM8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYM8_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 2.630e-42
Identity = 78/124 (62.90%), Postives = 85/124 (68.55%), Query Frame = 0

Query:    1 MGVLVLCVYDQYMYAIGGTAFAVCALFDIVAVLRWITGDD--------------GATAFWYALPPFLGAMTTGLGAIFSFTAVFFWKDVDDTAGLYPQIRQGSRTAELGLAPPAAHPRTPPPAY 110
            +G LVLC+YDQYMYAIGG  FAVCALFD+ AVLRWIT DD              G TA WYALPP LGA+T GLGAIFSFTAVFFW+D D TA     +    +T ELGLAP AAHP  PP AY
Sbjct:   49 VGGLVLCIYDQYMYAIGGVGFAVCALFDLFAVLRWITDDDNIVEGDDSFDGSSEGTTALWYALPPLLGAITMGLGAIFSFTAVFFWEDGDCTA-----MPHEGKTVELGLAPIAAHPGAPPRAY 167

[Close]

BLAST of mRNA_E_fasciculatus_S2_contig8856.16955.1 vs. uniprot
Match: A0A6H5JWS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWS2_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 6.790e-31
Identity = 67/145 (46.21%), Postives = 81/145 (55.86%), Query Frame = 0

Query:    1 MGVLVLCVYDQYMYAIGGTAFAVCALFDIVAVLRWITGDD-------------------------GATAFWYALPPFLGAMTTGLGAIFSFTAVFFWKDVDDTAGLY--------------PQIRQGSRTAELGLAPPAAHPRTP 106
            MG L+LC Y++YMY IG   FA+CA+FD++AVLRWIT DD                              W A+PPFLGA+  GLGAIF+FTA+F WK    TA  +              PQ +Q S+TAELGLAPP AHPRTP
Sbjct:   74 MGGLLLCFYERYMYVIGSLGFALCAVFDVLAVLRWITRDDEIFDSDDDYNTTFQVDDTQSEESSDSTILLWLAVPPFLGAIAMGLGAIFTFTAIFAWKYGGGTAIPHVPVAPQPTFDFTKQPQSQQESKTAELGLAPPTAHPRTP 218

[Close]

BLAST of mRNA_E_fasciculatus_S2_contig8856.16955.1 vs. uniprot
Match: A0A6H5KAL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAL4_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 1.500e-12
Identity = 42/103 (40.78%), Postives = 54/103 (52.43%), Query Frame = 0

Query:    2 GVLVLCVYDQYMYAIGGTAFAVCALFDIVAVLRWIT-------------------GDDGA------TAFWYALPPFLGAMTTGLGAIFSFTAVFFWKDVDDTA 79
            GVL LC+YD+  Y  GG  FAV A+FDI+ ++ WI                      DG          W+AL PFLGA++ GLGA+FSFT++ FWKD    A
Sbjct:   46 GVL-LCMYDRCAYITGGICFAVAAVFDILVLVGWIAIYNNLQDDYYXXXXXXXXXXXDGEWEDWKNVILWFALLPFLGALSLGLGAVFSFTSLCFWKDAGSPA 147

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig8856.16955.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig8856.16955.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7FYM8_ECTSI	2.630e-42	62.90	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A6H5JWS2_9PHAE	6.790e-31	46.21	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KAL4_9PHAE	1.500e-12	40.78	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 73..122
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..33
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 34..44
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 45..72
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..11
None	No IPR available	TMHMM	TMhelix		coord: 13..35
None	No IPR available	TMHMM	TMhelix		coord: 50..72

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig8856	contig	E_fasciculatus_S2_contig8856:1747..3756 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig8856.16955.1	mRNA_E_fasciculatus_S2_contig8856.16955.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig8856 1641..5205 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig8856.16955.1 ID=prot_E_fasciculatus_S2_contig8856.16955.1|Name=mRNA_E_fasciculatus_S2_contig8856.16955.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=123bp
MGVLVLCVYDQYMYAIGGTAFAVCALFDIVAVLRWITGDDGATAFWYALP
PFLGAMTTGLGAIFSFTAVFFWKDVDDTAGLYPQIRQGSRTAELGLAPPA
AHPRTPPPAYAYHPQSPPPAYR*