prot_E_fasciculatus_S2_contig8789.16887.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8789.16887.1
Unique Nameprot_E_fasciculatus_S2_contig8789.16887.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length97
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8789.16887.1 vs. uniprot
Match: D7FVX8_ECTSI (Ubiquinol cytochrome c reductase cytochrome c1 prec (ISS) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVX8_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 9.530e-58
Identity = 88/93 (94.62%), Postives = 89/93 (95.70%), Query Frame = 0
Query:    4 SPCLAGTSISMPPPLMDGQVEYPDGTEATVSQMSKDVTTFLAWCAEPEMDERKRMGMKWCSAMFLGLALSMYYKRFRWSPLKTRKITYHDINR 96
            +P   GTSISMPPPLMDGQVEYPDGT ATVSQMSKDVTTFLAWCAEPEMDERKRMGMKWCSAMFLGLALSMYYKRFRWSPLKTRKITYHDINR
Sbjct:  191 NPYFPGTSISMPPPLMDGQVEYPDGTPATVSQMSKDVTTFLAWCAEPEMDERKRMGMKWCSAMFLGLALSMYYKRFRWSPLKTRKITYHDINR 283          
BLAST of mRNA_E_fasciculatus_S2_contig8789.16887.1 vs. uniprot
Match: A0A835Z587_9STRA (Cytochrome c1 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z587_9STRA)

HSP 1 Score: 129 bits (325), Expect = 4.020e-35
Identity = 58/90 (64.44%), Postives = 74/90 (82.22%), Query Frame = 0
Query:    4 SPCLAGTSISMPPPLMDGQVEYPDGTEATVSQMSKDVTTFLAWCAEPEMDERKRMGMKWCSAMFLGLALSMYYKRFRWSPLKTRKITYHD 93
            +P  AG +I+MPPPLMDGQVEY DGT ATV+QM+KDV+ FLAWCAEPE DERK+ G+K  + + LG+ ++ YYKR RW+P+KTRKITY +
Sbjct:  183 NPYFAGGAIAMPPPLMDGQVEYEDGTPATVTQMAKDVSQFLAWCAEPEHDERKKFGVKAVTVLALGIGITAYYKRLRWAPVKTRKITYME 272          
BLAST of mRNA_E_fasciculatus_S2_contig8789.16887.1 vs. uniprot
Match: A0A485LA40_9STRA (Aste57867_18449 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LA40_9STRA)

HSP 1 Score: 123 bits (309), Expect = 1.020e-32
Identity = 56/88 (63.64%), Postives = 69/88 (78.41%), Query Frame = 0
Query:    4 SPCLAGTSISMPPPLMDGQVEYPDGTEATVSQMSKDVTTFLAWCAEPEMDERKRMGMKWCSAMFLGLALSMYYKRFRWSPLKTRKITY 91
            +P   G +I+MP PL DG+VEY DGT ATVSQM+KDV+ FL+W AEPE DERK+MGM+WC  +F+   L+ YYKR RW+PLKTRKI Y
Sbjct:  184 NPYFGGGAIAMPAPLEDGKVEYEDGTPATVSQMAKDVSVFLSWAAEPEHDERKKMGMQWCFGLFVTALLTGYYKRMRWAPLKTRKIEY 271          
BLAST of mRNA_E_fasciculatus_S2_contig8789.16887.1 vs. uniprot
Match: A0A067C0J4_SAPPC (Cytochrome c domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C0J4_SAPPC)

HSP 1 Score: 121 bits (304), Expect = 5.570e-32
Identity = 56/88 (63.64%), Postives = 67/88 (76.14%), Query Frame = 0
Query:    4 SPCLAGTSISMPPPLMDGQVEYPDGTEATVSQMSKDVTTFLAWCAEPEMDERKRMGMKWCSAMFLGLALSMYYKRFRWSPLKTRKITY 91
            +P  +G  I+M  PL DGQVEY DGT ATVSQM+KDV  FL+W AEPE DERK+MGM+WC  +F+    + YYKR RW+PLKTRKITY
Sbjct:  183 NPYFSGGMIAMAQPLNDGQVEYEDGTPATVSQMAKDVACFLSWAAEPEHDERKKMGMQWCFGLFVTALFTGYYKRMRWAPLKTRKITY 270          
BLAST of mRNA_E_fasciculatus_S2_contig8789.16887.1 vs. uniprot
Match: A0A7R9YFS8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFS8_9STRA)

HSP 1 Score: 119 bits (298), Expect = 3.670e-31
Identity = 56/88 (63.64%), Postives = 70/88 (79.55%), Query Frame = 0
Query:    4 SPCLAGTSISMPPPLMDGQVEYPDGTEATVSQMSKDVTTFLAWCAEPEMDERKRMGMKWCSAMFLGLALSMYYKRFRWSPLKTRKITY 91
            +P   G +I+MP  LMDGQVEY DGT AT SQM+KDV TFLAWCAEPE DERK+ G++  +A+F+   ++ YYKRFR+SPLKTR+ITY
Sbjct:  175 NPYFPGGAIAMPKQLMDGQVEYEDGTPATESQMAKDVATFLAWCAEPEHDERKKAGVRILAALFVAFLITGYYKRFRYSPLKTRQITY 262          
BLAST of mRNA_E_fasciculatus_S2_contig8789.16887.1 vs. uniprot
Match: A0A7S0V9M0_9CRYP (Hypothetical protein n=3 Tax=Hemiselmis TaxID=77924 RepID=A0A7S0V9M0_9CRYP)

HSP 1 Score: 117 bits (294), Expect = 1.520e-30
Identity = 54/89 (60.67%), Postives = 65/89 (73.03%), Query Frame = 0
Query:    4 SPCLAGTSISMPPPLMDGQVEYPDGTEATVSQMSKDVTTFLAWCAEPEMDERKRMGMKWCSAMFLGLALSMYYKRFRWSPLKTRKITYH 92
            +P   G  I MPPP+ DG VEY DGTEA  SQMSKDVTTFLAW AEPE DERK+ G+K  +A+      + +YKRF WSPLK+RKI++H
Sbjct:  178 NPYFPGGKIQMPPPIYDGGVEYEDGTEANASQMSKDVTTFLAWAAEPEQDERKKTGLKVITALSFAAVAAFWYKRFMWSPLKSRKISFH 266          
BLAST of mRNA_E_fasciculatus_S2_contig8789.16887.1 vs. uniprot
Match: A0A8J2WYD8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WYD8_9STRA)

HSP 1 Score: 116 bits (291), Expect = 4.960e-30
Identity = 56/88 (63.64%), Postives = 66/88 (75.00%), Query Frame = 0
Query:    4 SPCLAGTSISMPPPLMDGQVEYPDGTEATVSQMSKDVTTFLAWCAEPEMDERKRMGMKWCSAMFLGLALSMYYKRFRWSPLKTRKITY 91
            +P  AG +I MP PLMD QVEYPDGT ATVSQM+KDV  FLAW AEPE DERK+ G +W +A+ L   ++ Y KRFRW+ LK RKITY
Sbjct:  184 NPYFAGGAIGMPAPLMDEQVEYPDGTPATVSQMAKDVAVFLAWVAEPEHDERKKGGFRWITALGLAALVAGYTKRFRWANLKARKITY 271          
BLAST of mRNA_E_fasciculatus_S2_contig8789.16887.1 vs. uniprot
Match: A0A7S1TQH4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQH4_9STRA)

HSP 1 Score: 116 bits (290), Expect = 6.270e-30
Identity = 54/88 (61.36%), Postives = 70/88 (79.55%), Query Frame = 0
Query:    4 SPCLAGTSISMPPPLMDGQVEYPDGTEATVSQMSKDVTTFLAWCAEPEMDERKRMGMKWCSAMFLGLALSMYYKRFRWSPLKTRKITY 91
            +P  AG +I+MP PL DG VEY DGTEAT SQM+KDV+TFLAWCAEPE D+RK+ G++   A+ +   L+ +YKRFR+SPLKTR+I+Y
Sbjct:  179 NPYFAGGAIAMPAPLTDGAVEYEDGTEATASQMAKDVSTFLAWCAEPEADDRKKNGVRIIGALTVAFLLTGFYKRFRYSPLKTRQISY 266          
BLAST of mRNA_E_fasciculatus_S2_contig8789.16887.1 vs. uniprot
Match: W4G561_9STRA (Cytochrome c domain-containing protein n=2 Tax=Aphanomyces TaxID=100860 RepID=W4G561_9STRA)

HSP 1 Score: 114 bits (286), Expect = 2.760e-29
Identity = 52/88 (59.09%), Postives = 65/88 (73.86%), Query Frame = 0
Query:    4 SPCLAGTSISMPPPLMDGQVEYPDGTEATVSQMSKDVTTFLAWCAEPEMDERKRMGMKWCSAMFLGLALSMYYKRFRWSPLKTRKITY 91
            +P   G +I+M   L DG+V Y DGT AT SQM+KDV+ FLAW AEPE DERK+MG++WC  +F    L+ YYKR RW+PLKTRKI+Y
Sbjct:  184 NPYFGGGAIAMEKQLEDGKVTYEDGTPATASQMAKDVSVFLAWAAEPEHDERKKMGLQWCLGLFAAAVLTGYYKRLRWAPLKTRKISY 271          
BLAST of mRNA_E_fasciculatus_S2_contig8789.16887.1 vs. uniprot
Match: A0A388MFW7_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388MFW7_CHABU)

HSP 1 Score: 108 bits (271), Expect = 5.500e-29
Identity = 52/92 (56.52%), Postives = 66/92 (71.74%), Query Frame = 0
Query:    4 SPCLAGTSISMPPPLMDGQVEYPDGTEATVSQMSKDVTTFLAWCAEPEMDERKRMGMKWCSAMFLGLALSMYYKRFRWSPLKTRKITYHDIN 95
            +P   G +I+MP  L DGQVEY DGT AT SQM+KDV TFLAW AEPEM+ERK MGMK   A+   L  + YY+R++W+PLK+R+I    +N
Sbjct:    8 NPYFPGGAIAMPKQLTDGQVEYEDGTPATESQMAKDVVTFLAWAAEPEMEERKLMGMKLILALSFALLTAGYYRRWKWAPLKSRRIVLDVVN 99          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8789.16887.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVX8_ECTSI9.530e-5894.62Ubiquinol cytochrome c reductase cytochrome c1 pre... [more]
A0A835Z587_9STRA4.020e-3564.44Cytochrome c1 n=2 Tax=Tribonema minus TaxID=303371... [more]
A0A485LA40_9STRA1.020e-3263.64Aste57867_18449 protein n=1 Tax=Aphanomyces stella... [more]
A0A067C0J4_SAPPC5.570e-3263.64Cytochrome c domain-containing protein n=4 Tax=Sap... [more]
A0A7R9YFS8_9STRA3.670e-3163.64Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S0V9M0_9CRYP1.520e-3060.67Hypothetical protein n=3 Tax=Hemiselmis TaxID=7792... [more]
A0A8J2WYD8_9STRA4.960e-3063.64Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S1TQH4_9STRA6.270e-3061.36Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
W4G561_9STRA2.760e-2959.09Cytochrome c domain-containing protein n=2 Tax=Aph... [more]
A0A388MFW7_CHABU5.500e-2956.52Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002326Cytochrome c1PRINTSPR00603CYTOCHROMEC1coord: 11..30
score: 54.64
coord: 50..65
score: 46.43
coord: 31..50
score: 66.43
IPR002326Cytochrome c1PFAMPF02167Cytochrom_C1coord: 6..83
e-value: 1.2E-27
score: 97.1
IPR002326Cytochrome c1PANTHERPTHR10266CYTOCHROME C1coord: 5..92
NoneNo IPR availableGENE3D1.20.5.100coord: 51..95
e-value: 5.6E-16
score: 60.3
NoneNo IPR availablePANTHERPTHR10266:SF3CYTOCHROME C1, HEME PROTEIN, MITOCHONDRIALcoord: 5..92
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..58
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 77..96
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 59..76
IPR036909Cytochrome c-like domain superfamilyGENE3D1.10.760.10coord: 3..50
e-value: 3.2E-18
score: 69.1
IPR036909Cytochrome c-like domain superfamilySUPERFAMILY46626Cytochrome ccoord: 4..49
IPR021157Cytochrome c1, transmembrane anchor, C-terminalSUPERFAMILY81496Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchorcoord: 50..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8789contigE_fasciculatus_S2_contig8789:39..1107 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8789.16887.1mRNA_E_fasciculatus_S2_contig8789.16887.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8789 39..1107 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8789.16887.1 ID=prot_E_fasciculatus_S2_contig8789.16887.1|Name=mRNA_E_fasciculatus_S2_contig8789.16887.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=97bp
MPLSPCLAGTSISMPPPLMDGQVEYPDGTEATVSQMSKDVTTFLAWCAEP
EMDERKRMGMKWCSAMFLGLALSMYYKRFRWSPLKTRKITYHDINR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021157Cyt_c1_TM_anchor_C
IPR036909Cyt_c-like_dom_sf
IPR002326Cyt_c1