prot_E_fasciculatus_S2_contig8743.16847.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig8743.16847.1
Unique Name	prot_E_fasciculatus_S2_contig8743.16847.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	78

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig8743.16847.1 vs. uniprot
Match: A0A6H5KJF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJF0_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 5.750e-49
Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 0

Query:    1 MGNHDRPQTTKSVLINMWSTLTIFLPIFIIVRFDLLWDLLMVWAAATSIMMIVPPVGWIRPHPYSDFLWNRRRSRAD 77
            MGNHDRPQTTKSVLINMWSTLTI LPIFIIVRFDLLWDLLMVWAAATSIMM+VPPVGWIRPHPYSDF+WNRRRSRAD
Sbjct:    1 MGNHDRPQTTKSVLINMWSTLTIVLPIFIIVRFDLLWDLLMVWAAATSIMMVVPPVGWIRPHPYSDFVWNRRRSRAD 77

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BLAST of mRNA_E_fasciculatus_S2_contig8743.16847.1 vs. uniprot
Match: A0A835Z948_9STRA (Sulfotransferase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z948_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.490e-20
Identity = 42/73 (57.53%), Postives = 54/73 (73.97%), Query Frame = 0

Query:    1 MGNHDRPQTTKSVLINMWSTLTIFLPIFIIVRFDLLWDLLMVWAAATSIMMIVPPVGWIRPHPYSDFLWNRRR 73
            M  HD+PQT KS++IN+WS ++I  P+ +IVR +    +L VW A T +MMIVPP GW+RPH YSDF WNRRR
Sbjct:  366 MAKHDKPQTLKSMVINLWSLVSILGPMVLIVRMETWQAVLAVWVAVTLLMMIVPPFGWLRPHAYSDFEWNRRR 438

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BLAST of mRNA_E_fasciculatus_S2_contig8743.16847.1 vs. uniprot
Match: A0A7S2A8U7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A8U7_TRICV)

HSP 1 Score: 54.7 bits (130), Expect = 7.880e-8
Identity = 31/77 (40.26%), Postives = 44/77 (57.14%), Query Frame = 0

Query:    5 DRPQTTKSVLINMWSTLTIFLPIFIIVRFDL----LWDLLMVWAAATSIMMIVPPVGWIRPHPYSDFLWNRRRSRAD 77
            DR    KS+ IN+ +TL  FLPI     FD      +  ++ W+ A +  +++PP GW+RPHPYSDF WN+     D
Sbjct:   35 DRGLDPKSIAINIATTLFFFLPI--AAYFDASNARFYCEVVGWSMALA--LLIPPFGWLRPHPYSDFAWNKPVGHRD 107

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig8743.16847.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig8743.16847.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5KJF0_9PHAE	5.750e-49	96.10	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835Z948_9STRA	1.490e-20	57.53	Sulfotransferase family-domain-containing protein ...	[more]
A0A7S2A8U7_TRICV	7.880e-8	40.26	Hypothetical protein n=1 Tax=Trieres chinensis Tax...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 39..59
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 34..38
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..33
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 60..77
None	No IPR available	TMHMM	TMhelix		coord: 40..59
None	No IPR available	TMHMM	TMhelix		coord: 13..30

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig8743	contig	E_fasciculatus_S2_contig8743:578..4264 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig8743.16847.1	mRNA_E_fasciculatus_S2_contig8743.16847.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig8743 270..5292 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig8743.16847.1 ID=prot_E_fasciculatus_S2_contig8743.16847.1|Name=mRNA_E_fasciculatus_S2_contig8743.16847.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=78bp
MGNHDRPQTTKSVLINMWSTLTIFLPIFIIVRFDLLWDLLMVWAAATSIM
MIVPPVGWIRPHPYSDFLWNRRRSRAD*