prot_E_fasciculatus_S2_contig8692.16801.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8692.16801.1
Unique Nameprot_E_fasciculatus_S2_contig8692.16801.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length391
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig8692.16801.1 vs. uniprot
Match: D7FNK0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNK0_ECTSI)

HSP 1 Score: 667 bits (1722), Expect = 2.810e-229
Identity = 353/379 (93.14%), Postives = 357/379 (94.20%), Query Frame = 0 
Query:   14 FDELVASGDESLRPDLYTYNTLMTVFSDAGMLPRALELLEEAKAKRXXXXXXXXXXLIRACERSMPSQPDVALKLVSDMEAEGVRPNNTTYVGVAISLGRSARPLECLDLLRSMHEKGTPPDAICYLAVLKVLDRWDLAEEASLLFEEMMETREQIALMPAIAEETYCCGIRALERLGKWSEAVSLLDQWRQKGSYDADNDRMYDQWYRALRLLSTGGLPEETDVKTSRAAIVSAARGGLVEDALAIMRSMESRGFELGVVEYGAAIEAFEQAGKPERGCVLL-RGIAAGVEPDVLCYAAATRCCCRRLDWAGAISFVETTLREGLLPTGKTFETVAGLCRNSGRYEELWDLKELMRDIVVDGGGLARPGSSIYVSLIR 391
            FDELVASGDESLR           VFSDAGMLPRALELLEEAKAKR  XXXXXXX LIRACERSMPSQPDVALKLVSDMEAEGVRPNNTTYVGVAISLGRSARPLECLDLLRSMH KGTPPDAICYLAVLKVLDRWDLAEEASLLFEEM+ET EQIALMPAIAEETYCCGIRALERLGKWSEAV+LLDQWRQKGSYDADNDRMYDQWYRALRLLSTGGLPEETDVKTSRAAIVSAARGGLVEDALAIMRSMESRGFELGVVEYGAAIEAFE+AGKPERG  +    IAAGVEPDVLCYAAATRCCCRRLDWAGAISFVETTLREGLLPTGKTFETVAGLCRNSGRYEELWDLKELMRDIVVDGGGLARPGSSIYVSLIR
Sbjct:  464 FDELVASGDESLRXXXXXXXXXXXVFSDAGMLPRALELLEEAKAKRLRXXXXXXXTLIRACERSMPSQPDVALKLVSDMEAEGVRPNNTTYVGVAISLGRSARPLECLDLLRSMHGKGTPPDAICYLAVLKVLDRWDLAEEASLLFEEMVETIEQIALMPAIAEETYCCGIRALERLGKWSEAVALLDQWRQKGSYDADNDRMYDQWYRALRLLSTGGLPEETDVKTSRAAIVSAARGGLVEDALAIMRSMESRGFELGVVEYGAAIEAFEKAGKPERGLEMFDEMIAAGVEPDVLCYAAATRCCCRRLDWAGAISFVETTLREGLLPTGKTFETVAGLCRNSGRYEELWDLKELMRDIVVDGGGLARPGSSIYVSLIR 842
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BLAST of mRNA_E_fasciculatus_S2_contig8692.16801.1 vs. uniprot
Match: A0A7S1XI75_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XI75_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 3.350e-5
Identity = 37/112 (33.04%), Postives = 58/112 (51.79%), Query Frame = 0 
Query:    7 WEMAMSLFDELVASGDESLRPDLYTYNTLMTVFSDAGMLPRALELLEEAKAKRXXXXXXXXXX--LIRACERSMPSQPDVALKLVSDMEAEGVRPNNTTYVGVAISLGRSAR 116
            W +A  + + +   GD ++ P+ Y Y+TL+TV   A  L  A+ ++   KA+             L+ ACERS  +    ALK++++MEAEGV  +  +Y  V   LGR  R
Sbjct:  150 WRIAPFVVEYMSNKGDAAMAPNEYHYSTLVTVLGKASKLAEAMRVVWSMKARGGDSAPGVVTYNALLAACERSWDAAR--ALKVLAEMEAEGVPADQISYATVIKVLGRRGR 259
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8692.16801.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNK0_ECTSI2.810e-22993.14Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1XI75_9STRA3.350e-533.04Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 27..74
e-value: 4.8E-12
score: 45.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 30..64
e-value: 5.6E-5
score: 21.0
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 184..207
e-value: 0.09
score: 13.1
coord: 248..269
e-value: 0.57
score: 10.6
coord: 4..21
e-value: 0.98
score: 9.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 341..371
score: 5.404
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 306..340
score: 7.728
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1..24
score: 5.974
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 28..62
score: 11.126
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 176..210
score: 7.629
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 135..169
score: 6.763
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 100..134
score: 8.298
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 63..99
score: 10.731
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 237..271
score: 8.331
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..79
e-value: 6.8E-18
score: 67.3
coord: 80..222
e-value: 8.3E-20
score: 73.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 223..384
e-value: 4.4E-19
score: 71.0
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 4..202
coord: 235..369

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8692contigE_fasciculatus_S2_contig8692:4..6359 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8692.16801.1mRNA_E_fasciculatus_S2_contig8692.16801.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8692 4..6359 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8692.16801.1 ID=prot_E_fasciculatus_S2_contig8692.16801.1|Name=mRNA_E_fasciculatus_S2_contig8692.16801.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=391bp
MKQGGQWEMAMSLFDELVASGDESLRPDLYTYNTLMTVFSDAGMLPRALE
LLEEAKAKRLRPDVVTYSTLIRACERSMPSQPDVALKLVSDMEAEGVRPN
NTTYVGVAISLGRSARPLECLDLLRSMHEKGTPPDAICYLAVLKVLDRWD
LAEEASLLFEEMMETREQIALMPAIAEETYCCGIRALERLGKWSEAVSLL
DQWRQKGSYDADNDRMYDQWYRALRLLSTGGLPEETDVKTSRAAIVSAAR
GGLVEDALAIMRSMESRGFELGVVEYGAAIEAFEQAGKPERGCVLLRGIA
AGVEPDVLCYAAATRCCCRRLDWAGAISFVETTLREGLLPTGKTFETVAG
LCRNSGRYEELWDLKELMRDIVVDGGGLARPGSSIYVSLIR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat