prot_E_fasciculatus_S2_contig8630.16752.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8630.16752.1
Unique Nameprot_E_fasciculatus_S2_contig8630.16752.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length312
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8630.16752.1 vs. uniprot
Match: D7FXT3_ECTSI (TFIID and SAGA subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXT3_ECTSI)

HSP 1 Score: 426 bits (1095), Expect = 3.900e-142
Identity = 243/312 (77.88%), Postives = 252/312 (80.77%), Query Frame = 0
Query:    1 QVERKKLEEKKARLLAGRDDGEXXXXXXXXXXDDVRAFARRQGMDAAVRDGDNVMAWGILEGSPEKVEQAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMFNHGAEARSLMRAWGGEHEERFNDEMTLLKMVTAKEHAEASDYCKLVLTHKFRVKICLATSKLLNAFLVNKGLLLVMHILNTRVQFVMEERSPLPFAQASQDGRDEMYLMKVVRCGPDDAFPAALRPRLSDEDKTKEGSEPARDAPPSKGAKEPAXXXXXXXXXXXXXXXXXXXARGRVEEEDLKWAAAPPMEVALLKQTEREVSI 312
            +VERKKLEEKKARLLAG DDGEXXXXXXX   DDVRAFARRQGMDAAVRDGD+VMAWGILEGSPEKVEQAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMF+HGAEAR LMRAWGGEHEERF DEMTLLKMVTA+EHAEASDYCKLVLTHKFRVKICLATSKLLNAFLVNKGLLLVMHILNTRVQFV+EERSPLPFAQ             VVRCGPDDAFPAALRPR SD                 K  KEPA                    RG V+EEDLKWAAAPPMEVAL+KQTER+VS+
Sbjct:   40 EVERKKLEEKKARLLAGGDDGEXXXXXXXEGGDDVRAFARRQGMDAAVRDGDSVMAWGILEGSPEKVEQAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMFDHGAEARGLMRAWGGEHEERFKDEMTLLKMVTAREHAEASDYCKLVLTHKFRVKICLATSKLLNAFLVNKGLLLVMHILNTRVQFVLEERSPLPFAQ-------------VVRCGPDDAFPAALRPRSSDXXXXXXXXXXXXXXXXXKATKEPAAPATTAGRGG---------GRG-VQEEDLKWAAAPPMEVALMKQTERDVSL 328          
BLAST of mRNA_E_fasciculatus_S2_contig8630.16752.1 vs. uniprot
Match: A0A6H5JEL6_9PHAE (TFIID_NTD2 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL6_9PHAE)

HSP 1 Score: 264 bits (675), Expect = 3.840e-85
Identity = 135/153 (88.24%), Postives = 140/153 (91.50%), Query Frame = 0
Query:    1 QVERKKLEEKKARLLAGRDDGEXXXXXXXXXXDDVRAFARRQGMDAAVRDGDNVMAWGILEGSPEKVEQAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMFNHGAEARSLMRAWGGEHEERFNDEMTLLKMVTAKEHAEASDYCKLV 153
            +VERK+LEEKKARLLAG DDGE     X    DDVRAFA RQGMDAAVRDGD+VMAWGILEGSPEKVEQAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMF+HGAEAR LMRAWGGEHEERF DEMTLLKMVTA+EHAEASDYCKLV
Sbjct:   40 EVERKRLEEKKARLLAGGDDGEDGSPGXGEGGDDVRAFAIRQGMDAAVRDGDSVMAWGILEGSPEKVEQAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMFDHGAEARGLMRAWGGEHEERFKDEMTLLKMVTAREHAEASDYCKLV 192          
BLAST of mRNA_E_fasciculatus_S2_contig8630.16752.1 vs. uniprot
Match: A0A6H5JH71_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH71_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 2.740e-22
Identity = 72/95 (75.79%), Postives = 77/95 (81.05%), Query Frame = 0
Query:  217 KVVRCGPDDAFPAALRPRLSDEDKTKEGSEPARDAPPSKGAKEPAXXXXXXXXXXXXXXXXXXXARGRVEEEDLKWAAAPPMEVALLKQTEREVS 311
            +VVRCGPDDAFPAALRPR SDEDK+KE SE ARD+PPSK  KEP  XXXXXXXXXXXX          VEEEDLKWAAAPPMEVALLKQTER+ +
Sbjct:   41 QVVRCGPDDAFPAALRPRSSDEDKSKEESEAARDSPPSKATKEPVAXXXXXXXXXXXX----------VEEEDLKWAAAPPMEVALLKQTERDAA 125          
BLAST of mRNA_E_fasciculatus_S2_contig8630.16752.1 vs. uniprot
Match: A0A6A4A244_9STRA (TFIID_NTD2 domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4A244_9STRA)

HSP 1 Score: 105 bits (261), Expect = 2.200e-21
Identity = 57/174 (32.76%), Postives = 95/174 (54.60%), Query Frame = 0
Query:   35 VRAFARRQGMDAAVRDGDNVMAWGILEGSPEKVEQAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMFNHGAEARSLMRAWGGEHEERFNDEMTLLKMVTAKEHAEASDYCKLVLTHKFRVKICLATSKLLNAFLVNKGLLLVMHILNTRVQFVMEERSPLPFAQASQD 208
            +  FAR+ G+       ++++ +G+  G+PE  ++AY  L +++  S ++YR EL AV FP+FVHCYL L+        RS    +  +H     +E+  L +V + +H   +DY + VL  KF V++ L + +LLN FL  + L L++ I+N R+  V+    P    Q  QD
Sbjct:  103 IDTFARQLGLSTEACTANHLLFYGLTGGNPEAYDEAYGKLLDWICNSLDMYRNELHAVAFPIFVHCYLELLSKGFVEAGRSFFHKYSADHTRLHLEELRTLSLVFSPQHLRENDYVREVLHSKFNVEMSLLSFELLNTFLSQERLFLLLSIVNERINLVVTSNQPGVQIQQLQD 276          
BLAST of mRNA_E_fasciculatus_S2_contig8630.16752.1 vs. uniprot
Match: A0A2P4WVH9_9STRA (Transcription initiation factor TFIID subunit (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WVH9_9STRA)

HSP 1 Score: 100 bits (249), Expect = 3.110e-21
Identity = 53/165 (32.12%), Postives = 93/165 (56.36%), Query Frame = 0
Query:   35 VRAFARRQGMDAAVRDGDNVMAWGILEGSPEKVEQAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMFNHGAEARSLMRAWGGEHEERFNDEMTLLKMVTAKEHAEASDYCKLVLTHKFRVKICLATSKLLNAFLVNKGLLLVMHILNTRVQFVMEERSP 199
            +  +AR+ G+       ++++ +G+  G+PE  ++AY  L +++  S ++YR EL AV FPVFVHC+L L+        RS    +  +H     +E+ +L +V + +H   ++Y + VL  KF V++ L + +LLN FL  + L L++ I+N RV  V+    P
Sbjct:   95 IDKYARQLGLTTEACTANHLLFYGLTGGNPEAYDEAYEKLLDWICNSLDMYRNELHAVAFPVFVHCFLELLSKGFVEAGRSFFHRYATDHTRLHLEELRMLSIVFSPQHLRENEYVREVLHSKFNVEMSLLSFELLNTFLSQERLFLLLSIVNERVNLVVTSNQP 259          
BLAST of mRNA_E_fasciculatus_S2_contig8630.16752.1 vs. uniprot
Match: A0A5D6XMW3_9STRA (TFIID_NTD2 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XMW3_9STRA)

HSP 1 Score: 103 bits (256), Expect = 1.000e-20
Identity = 58/165 (35.15%), Postives = 90/165 (54.55%), Query Frame = 0
Query:   35 VRAFARRQGMDAAVRDGDNVMAWGILEGSPEKVEQAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMFNHGAEARSLMRAWGGEHEERFNDEMTLLKMVTAKEHAEASDYCKLVLTHKFRVKICLATSKLLNAFLVNKGLLLVMHILNTRVQFVMEERSP 199
            V  +A   G++      ++++ +G+  G P   E AY  L E++  S ++Y+ EL AV FP+FVHC+L LV       A + +R    +H      E+ LL MV    H  AS+Y + VL  KF V++ L + +LLNAFL ++ L L++ ILN RV  ++    P
Sbjct:  112 VEQYAHSLGLNTESCAANHILFYGMTGGDPSTYEHAYTQLMEWICNSLDMYKYELHAVAFPMFVHCFLELVAKGFAEHASAFLRRHAADHTRLHLAELRLLSMVLTPAHVRASEYAQQVLHSKFNVQMSLLSFELLNAFLGHEQLFLLLAILNERVNLIVTANQP 276          
BLAST of mRNA_E_fasciculatus_S2_contig8630.16752.1 vs. uniprot
Match: W2QFQ5_PHYPN (TFIID_NTD2 domain-containing protein n=19 Tax=Phytophthora TaxID=4783 RepID=W2QFQ5_PHYPN)

HSP 1 Score: 99.8 bits (247), Expect = 1.480e-19
Identity = 53/182 (29.12%), Postives = 99/182 (54.40%), Query Frame = 0
Query:   35 VRAFARRQGMDAAVRDGDNVMAWGILEGSPEKVEQAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMFNHGAEARSLMRAWGGEHEERFNDEMTLLKMVTAKEHAEASDYCKLVLTHKFRVKICLATSKLLNAFLVNKGLLLVMHILNTRVQFVMEERSPLPFAQASQDGRDEMYLM 216
            +  +A++ G+       ++++ +G+  G+PE  ++AY  L +++  S ++YR EL AV FP+FVHC+L L+        RS    +  +H     +E+  L +V + +H   ++Y + VL  KF +++ L + +LLN FL  + L L++ I+N RV  V+    P    Q  QD  + + ++
Sbjct:   98 IDKYAQQMGLTTEACTANHLLFYGLTGGNPEAYDEAYGKLLDWICNSLDMYRNELHAVAFPIFVHCFLELLAKGFVEAGRSFFHRYASDHTRLHLEELRTLSLVFSPQHLRENEYVREVLHSKFNIEMSLLSFELLNTFLSQERLFLLLSIVNERVNLVVTSNQPGIQIQQLQDASNPVEVL 279          
BLAST of mRNA_E_fasciculatus_S2_contig8630.16752.1 vs. uniprot
Match: A0A662XRE8_9STRA (TFIID_NTD2 domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XRE8_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 2.360e-19
Identity = 54/175 (30.86%), Postives = 97/175 (55.43%), Query Frame = 0
Query:   34 DVRAFARRQGMDAAVRDGDNVMAWGILEGSPEKVEQAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMFNHGAEARSLMRAWGGEHEERFNDEMTLLKMVTAKEHAEASDYCKLVLTHKFRVKICLATSKLLNAFLVNKGLLLVMHILNTRVQFVMEERSPLPFAQASQD 208
            D+ +FAR+ G+       ++++ +G+  G P   ++AY  L +++  S ++YR EL AV FP+FVHC+L L+   +    +   + +  +H     +E+  L +V A +H   ++Y + VL  KF V++ L + +LLN FL  + L L++ ++N+RV  V+    P    Q  QD
Sbjct:  102 DLDSFARQLGLTTEACTANHLLFYGLTGGDPTAYDEAYGKLLDWICNSLDMYRSELHAVAFPLFVHCFLELLAKGYTEAGKRFFQRYATDHARLHLEELRTLSLVFAPQHLRENEYVREVLHSKFNVELSLLSFELLNTFLSQERLFLLLAMVNSRVNLVVTSNQPGLQIQQLQD 276          
BLAST of mRNA_E_fasciculatus_S2_contig8630.16752.1 vs. uniprot
Match: A0A3R7H5F6_9STRA (TFIID_NTD2 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H5F6_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 3.610e-19
Identity = 54/174 (31.03%), Postives = 94/174 (54.02%), Query Frame = 0
Query:   35 VRAFARRQGMDAAVRDGDNVMAWGILEGSPEKVEQAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMFNHGAEARSLMRAWGGEHEERFNDEMTLLKMVTAKEHAEASDYCKLVLTHKFRVKICLATSKLLNAFLVNKGLLLVMHILNTRVQFVMEERSPLPFAQASQD 208
            +  +AR+ G+       ++++ +G+  G P   ++AY  L +++  S ++YR EL AV FPVF+HC+L L+   +   AR   + +  +H     +E+  L +V +  H   ++Y + VL  KF V++ L + +LLN FL  + L L++ I+N RV  V+    P    Q  QD
Sbjct:   49 IDKYARQLGLTTEACTANHLLFYGLTGGDPVAYDEAYGKLLDWICNSLDMYRSELHAVAFPVFLHCFLELISKGYSEPARKFYQKYAADHTRLHLEELRTLSLVFSPHHLRENEYVREVLHSKFNVEMSLLSFELLNTFLSQEKLFLLLAIVNERVNLVVASNQPGIQIQQLQD 222          
BLAST of mRNA_E_fasciculatus_S2_contig8630.16752.1 vs. uniprot
Match: A0A067CL81_SAPPC (TFIID_NTD2 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CL81_SAPPC)

HSP 1 Score: 97.4 bits (241), Expect = 8.370e-19
Identity = 55/165 (33.33%), Postives = 89/165 (53.94%), Query Frame = 0
Query:   35 VRAFARRQGMDAAVRDGDNVMAWGILEGSPEKVEQAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMFNHGAEARSLMRAWGGEHEERFNDEMTLLKMVTAKEHAEASDYCKLVLTHKFRVKICLATSKLLNAFLVNKGLLLVMHILNTRVQFVMEERSP 199
            ++ FAR  G+       ++V+  G+ +  P   E AY  L +++  + ++Y+ EL A+ FP+FVHCYL LV       A++  R    +HE     E+  L  V  +EH   ++Y K VL  KF+VK+ L T +LL+ FL +  + L+++ILN RV   +    P
Sbjct:   39 LQEFARNMGLSMDACAANHVLFHGMNKADPNAYEHAYSKLLQWIGNALDMYKLELHAIAFPLFVHCYLELVAKGFTEPAKAFFRRHAKDHERLHRLELRQLGCVLTREHLTLNEYAKQVLHAKFQVKLSLLTFQLLHTFLSDYQMFLLLYILNERVNIAVTSNHP 203          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8630.16752.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXT3_ECTSI3.900e-14277.88TFIID and SAGA subunit n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JEL6_9PHAE3.840e-8588.24TFIID_NTD2 domain-containing protein (Fragment) n=... [more]
A0A6H5JH71_9PHAE2.740e-2275.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6A4A244_9STRA2.200e-2132.76TFIID_NTD2 domain-containing protein n=4 Tax=Phyto... [more]
A0A2P4WVH9_9STRA3.110e-2132.12Transcription initiation factor TFIID subunit (Fra... [more]
A0A5D6XMW3_9STRA1.000e-2035.15TFIID_NTD2 domain-containing protein n=1 Tax=Pythi... [more]
W2QFQ5_PHYPN1.480e-1929.12TFIID_NTD2 domain-containing protein n=19 Tax=Phyt... [more]
A0A662XRE8_9STRA2.360e-1930.86TFIID_NTD2 domain-containing protein (Fragment) n=... [more]
A0A3R7H5F6_9STRA3.610e-1931.03TFIID_NTD2 domain-containing protein n=3 Tax=Phyto... [more]
A0A067CL81_SAPPC8.370e-1933.33TFIID_NTD2 domain-containing protein n=2 Tax=Sapro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037264TFIID subunit TAF5, NTD2 domain superfamilyGENE3D1.25.40.500coord: 46..195
e-value: 4.4E-34
score: 119.8
IPR037264TFIID subunit TAF5, NTD2 domain superfamilySUPERFAMILY160897Taf5 N-terminal domain-likecoord: 51..193
IPR007582TFIID subunit TAF5, NTD2 domainPFAMPF04494TFIID_NTD2coord: 62..189
e-value: 2.4E-33
score: 115.1
NoneNo IPR availablePANTHERPTHR19879TRANSCRIPTION INITIATION FACTOR TFIIDcoord: 62..286

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8630contigE_fasciculatus_S2_contig8630:262..4899 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8630.16752.1mRNA_E_fasciculatus_S2_contig8630.16752.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8630 262..4899 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8630.16752.1 ID=prot_E_fasciculatus_S2_contig8630.16752.1|Name=mRNA_E_fasciculatus_S2_contig8630.16752.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=312bp
QVERKKLEEKKARLLAGRDDGEDGSPGGGGGGDDVRAFARRQGMDAAVRD
GDNVMAWGILEGSPEKVEQAYRGLSEFVAASWELYRPELEAVMFPVFVHC
YLTLVMFNHGAEARSLMRAWGGEHEERFNDEMTLLKMVTAKEHAEASDYC
KLVLTHKFRVKICLATSKLLNAFLVNKGLLLVMHILNTRVQFVMEERSPL
PFAQASQDGRDEMYLMKVVRCGPDDAFPAALRPRLSDEDKTKEGSEPARD
APPSKGAKEPAAAAAAAAAAAAAAAAAGGGARGRVEEEDLKWAAAPPMEV
ALLKQTEREVSI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007582TFIID_NTD2
IPR037264TFIID_NTD2_sf