prot_E_fasciculatus_S2_contig8601.16727.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8601.16727.1
Unique Nameprot_E_fasciculatus_S2_contig8601.16727.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length54
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8601.16727.1 vs. uniprot
Match: D7FSH5_ECTSI (Pheophorbide a oxygenase, putative chloroplast n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSH5_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 3.070e-33
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
Query:    1 MGEGLVVWKDPKDGGWKAFADRCPHRWAPLSEGRVDQESGRLQCIYHGWEFEG 53
            MGEGLVVWKDPKDGGWKAFADRCPHRWAPLSEGRVDQESGRLQCIYHGWEFEG
Sbjct:   69 MGEGLVVWKDPKDGGWKAFADRCPHRWAPLSEGRVDQESGRLQCIYHGWEFEG 121          
BLAST of mRNA_E_fasciculatus_S2_contig8601.16727.1 vs. uniprot
Match: A0A6H5KID3_9PHAE (Rieske domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KID3_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 4.740e-28
Identity = 45/53 (84.91%), Postives = 49/53 (92.45%), Query Frame = 0
Query:    1 MGEGLVVWKDPKDGGWKAFADRCPHRWAPLSEGRVDQESGRLQCIYHGWEFEG 53
            +GE LVVWKDPKD GWKAF D+CPHRWAPLSEGRV+QE+GRL CIYHGWEFEG
Sbjct:  150 LGESLVVWKDPKDDGWKAFTDKCPHRWAPLSEGRVNQETGRLHCIYHGWEFEG 202          
BLAST of mRNA_E_fasciculatus_S2_contig8601.16727.1 vs. uniprot
Match: A0A835Z3X0_9STRA (Accelerated cell death 1 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3X0_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 1.730e-19
Identity = 35/53 (66.04%), Postives = 39/53 (73.58%), Query Frame = 0
Query:    1 MGEGLVVWKDPKDGGWKAFADRCPHRWAPLSEGRVDQESGRLQCIYHGWEFEG 53
            +GE LV+W+D     W+A  DRCPHRWAPLSEG VD E  RL C YHGWEFEG
Sbjct:    4 LGEPLVLWQDSTKQ-WRAALDRCPHRWAPLSEGFVDPEQKRLTCAYHGWEFEG 55          
BLAST of mRNA_E_fasciculatus_S2_contig8601.16727.1 vs. uniprot
Match: A0A0K9RV49_SPIOL (Rieske domain-containing protein n=1 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9RV49_SPIOL)

HSP 1 Score: 85.5 bits (210), Expect = 3.910e-18
Identity = 37/53 (69.81%), Postives = 41/53 (77.36%), Query Frame = 0
Query:    1 MGEGLVVWKDPKDGGWKAFADRCPHRWAPLSEGRVDQESGRLQCIYHGWEFEG 53
            +G  LVVW DP +  WKAF DRCPHR APLSEGR+DQ  GRLQC+YHGW F G
Sbjct:  109 IGIDLVVWWDPNEKSWKAFDDRCPHRLAPLSEGRIDQW-GRLQCVYHGWCFNG 160          
BLAST of mRNA_E_fasciculatus_S2_contig8601.16727.1 vs. uniprot
Match: A0A6G1DNG0_9ORYZ (Rieske domain-containing protein n=2 Tax=Oryzeae TaxID=147380 RepID=A0A6G1DNG0_9ORYZ)

HSP 1 Score: 84.7 bits (208), Expect = 4.890e-18
Identity = 35/49 (71.43%), Postives = 39/49 (79.59%), Query Frame = 0
Query:    5 LVVWKDPKDGGWKAFADRCPHRWAPLSEGRVDQESGRLQCIYHGWEFEG 53
            LV+WKDPK G W A  DRCPHR APLSEGR+D E+G LQC YHGW F+G
Sbjct:  106 LVIWKDPKSGEWVALDDRCPHRLAPLSEGRID-ETGCLQCSYHGWSFDG 153          
BLAST of mRNA_E_fasciculatus_S2_contig8601.16727.1 vs. uniprot
Match: A0A8J5VVV2_ZIZPA (Uncharacterized protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5VVV2_ZIZPA)

HSP 1 Score: 84.7 bits (208), Expect = 7.050e-18
Identity = 35/49 (71.43%), Postives = 39/49 (79.59%), Query Frame = 0
Query:    5 LVVWKDPKDGGWKAFADRCPHRWAPLSEGRVDQESGRLQCIYHGWEFEG 53
            LV+WKDPK G W A  DRCPHR APLSEGR+D E+G LQC YHGW F+G
Sbjct:  111 LVIWKDPKSGEWVALDDRCPHRLAPLSEGRID-ETGCLQCSYHGWSFDG 158          
BLAST of mRNA_E_fasciculatus_S2_contig8601.16727.1 vs. uniprot
Match: Q947Y2_ORYSJ (Putative cell death suppressor protein n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q947Y2_ORYSJ)

HSP 1 Score: 84.7 bits (208), Expect = 7.220e-18
Identity = 35/49 (71.43%), Postives = 39/49 (79.59%), Query Frame = 0
Query:    5 LVVWKDPKDGGWKAFADRCPHRWAPLSEGRVDQESGRLQCIYHGWEFEG 53
            LV+WKDPK G W A  DRCPHR APLSEGR+D E+G LQC YHGW F+G
Sbjct:  103 LVIWKDPKSGEWVALDDRCPHRLAPLSEGRID-ETGCLQCSYHGWSFDG 150          
BLAST of mRNA_E_fasciculatus_S2_contig8601.16727.1 vs. uniprot
Match: K4A8E1_SETIT (Rieske domain-containing protein n=22 Tax=PACMAD clade TaxID=147370 RepID=K4A8E1_SETIT)

HSP 1 Score: 84.7 bits (208), Expect = 7.280e-18
Identity = 35/49 (71.43%), Postives = 39/49 (79.59%), Query Frame = 0
Query:    5 LVVWKDPKDGGWKAFADRCPHRWAPLSEGRVDQESGRLQCIYHGWEFEG 53
            LV+WKDPK G W A  DRCPHR APLSEGR+D E+G LQC YHGW F+G
Sbjct:  104 LVIWKDPKSGEWVALDDRCPHRLAPLSEGRID-ETGCLQCSYHGWSFDG 151          
BLAST of mRNA_E_fasciculatus_S2_contig8601.16727.1 vs. uniprot
Match: PAO_ORYSJ (Pheophorbide a oxygenase, chloroplastic n=16 Tax=Oryzeae TaxID=147380 RepID=PAO_ORYSJ)

HSP 1 Score: 84.7 bits (208), Expect = 7.290e-18
Identity = 35/49 (71.43%), Postives = 39/49 (79.59%), Query Frame = 0
Query:    5 LVVWKDPKDGGWKAFADRCPHRWAPLSEGRVDQESGRLQCIYHGWEFEG 53
            LV+WKDPK G W A  DRCPHR APLSEGR+D E+G LQC YHGW F+G
Sbjct:  106 LVIWKDPKSGEWVALDDRCPHRLAPLSEGRID-ETGCLQCSYHGWSFDG 153          
BLAST of mRNA_E_fasciculatus_S2_contig8601.16727.1 vs. uniprot
Match: A0A6G1DMM4_9ORYZ (Rieske domain-containing protein n=1 Tax=Oryza meyeriana var. granulata TaxID=110450 RepID=A0A6G1DMM4_9ORYZ)

HSP 1 Score: 84.7 bits (208), Expect = 7.300e-18
Identity = 35/49 (71.43%), Postives = 39/49 (79.59%), Query Frame = 0
Query:    5 LVVWKDPKDGGWKAFADRCPHRWAPLSEGRVDQESGRLQCIYHGWEFEG 53
            LV+WKDPK G W A  DRCPHR APLSEGR+D E+G LQC YHGW F+G
Sbjct:  107 LVIWKDPKSGEWVALDDRCPHRLAPLSEGRID-ETGCLQCSYHGWSFDG 154          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8601.16727.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSH5_ECTSI3.070e-33100.00Pheophorbide a oxygenase, putative chloroplast n=1... [more]
A0A6H5KID3_9PHAE4.740e-2884.91Rieske domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A835Z3X0_9STRA1.730e-1966.04Accelerated cell death 1 (Fragment) n=1 Tax=Tribon... [more]
A0A0K9RV49_SPIOL3.910e-1869.81Rieske domain-containing protein n=1 Tax=Spinacia ... [more]
A0A6G1DNG0_9ORYZ4.890e-1871.43Rieske domain-containing protein n=2 Tax=Oryzeae T... [more]
A0A8J5VVV2_ZIZPA7.050e-1871.43Uncharacterized protein n=1 Tax=Zizania palustris ... [more]
Q947Y2_ORYSJ7.220e-1871.43Putative cell death suppressor protein n=1 Tax=Ory... [more]
K4A8E1_SETIT7.280e-1871.43Rieske domain-containing protein n=22 Tax=PACMAD c... [more]
PAO_ORYSJ7.290e-1871.43Pheophorbide a oxygenase, chloroplastic n=16 Tax=O... [more]
A0A6G1DMM4_9ORYZ7.300e-1871.43Rieske domain-containing protein n=1 Tax=Oryza mey... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyGENE3D2.102.10.10coord: 1..53
e-value: 1.1E-18
score: 69.1
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilySUPERFAMILY50022ISP domaincoord: 2..52
IPR017941Rieske [2Fe-2S] iron-sulphur domainPFAMPF00355Rieskecoord: 2..52
e-value: 3.3E-13
score: 49.4
IPR017941Rieske [2Fe-2S] iron-sulphur domainPROSITEPS51296RIESKEcoord: 1..53
score: 22.338
NoneNo IPR availablePANTHERPTHR21266:SF47coord: 1..53
NoneNo IPR availablePANTHERPTHR21266IRON-SULFUR DOMAIN CONTAINING PROTEINcoord: 1..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8601contigE_fasciculatus_S2_contig8601:84..909 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8601.16727.1mRNA_E_fasciculatus_S2_contig8601.16727.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8601 84..918 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8601.16727.1 ID=prot_E_fasciculatus_S2_contig8601.16727.1|Name=mRNA_E_fasciculatus_S2_contig8601.16727.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=54bp
MGEGLVVWKDPKDGGWKAFADRCPHRWAPLSEGRVDQESGRLQCIYHGWE
FEG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017941Rieske_2Fe-2S
IPR036922Rieske_2Fe-2S_sf