prot_E_fasciculatus_S2_contig8598.16719.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8598.16719.1
Unique Nameprot_E_fasciculatus_S2_contig8598.16719.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length260
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig8598.16719.1 vs. uniprot
Match: D7G1K8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1K8_ECTSI)

HSP 1 Score: 398 bits (1023), Expect = 1.570e-137
Identity = 240/275 (87.27%), Postives = 249/275 (90.55%), Query Frame = 0 
Query:    1 MRSDIATVVAFGLLSVCPISAAPTYSCFDPPDEGQTNPLGEGMEDVVESECCEALIDESDMMADREVIWDPVNCNHGPGEEPIAEAYLCRAHDTDGCRFCHDSCDGFEGLCITCDEVAEELLNSDSPTPSPDFETSDFPATAAPAIITAGTEAPFGIFPATPAPVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------APAPTAEASDCECFNSLSEEEMAVLTRRSKNMVCDPTCSDQSDLVWGELR 259
            MRSDIATV+AFGLLSVCP+SAAPTYSCFDPPDEGQTNPLGEGMEDVVESECCEALIDESDMMADREVIWDPVNCNHGPG+EPIAEAYLCRAHDTDGCRFCHDSCDG+EGLCITC+EV E+LLNSDSPTPSPDFETS+FPAT APAI+TA TEAPFGIFPATPAPVA  XX  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                APAPTAEASDCEC NSLSEEEMAVLTRRSKNMVCDPTCSDQSDLVWG + 
Sbjct:    1 MRSDIATVIAFGLLSVCPVSAAPTYSCFDPPDEGQTNPLGEGMEDVVESECCEALIDESDMMADREVIWDPVNCNHGPGDEPIAEAYLCRAHDTDGCRFCHDSCDGYEGLCITCEEVLEDLLNSDSPTPSPDFETSEFPATPAPAILTAATEAPFGIFPATPAPVAPVXXPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAPTAEASDCECVNSLSEEEMAVLTRRSKNMVCDPTCSDQSDLVWGVMN 275
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8598.16719.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1K8_ECTSI1.570e-13787.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..259
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.705

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8598contigE_fasciculatus_S2_contig8598:3906..6515 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8598.16719.1mRNA_E_fasciculatus_S2_contig8598.16719.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8598 3906..6515 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8598.16719.1 ID=prot_E_fasciculatus_S2_contig8598.16719.1|Name=mRNA_E_fasciculatus_S2_contig8598.16719.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=260bp
MRSDIATVVAFGLLSVCPISAAPTYSCFDPPDEGQTNPLGEGMEDVVESE
CCEALIDESDMMADREVIWDPVNCNHGPGEEPIAEAYLCRAHDTDGCRFC
HDSCDGFEGLCITCDEVAEELLNSDSPTPSPDFETSDFPATAAPAIITAG
TEAPFGIFPATPAPVAPVSPPTEAPAAPPTEAPVAPATDAPVAPATDAPV
APATDAPVAAPAPTAEASDCECFNSLSEEEMAVLTRRSKNMVCDPTCSDQ
SDLVWGELR*
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