prot_E_fasciculatus_S2_contig856.16686.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig856.16686.1
Unique Name	prot_E_fasciculatus_S2_contig856.16686.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	397

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig856.16686.1 vs. uniprot
Match: A0A6H5J880_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J880_9PHAE)

HSP 1 Score: 292 bits (747), Expect = 9.420e-91
Identity = 256/398 (64.32%), Postives = 268/398 (67.34%), Query Frame = 0

Query:    1 MSTPQRGGYSSRSKGKSRGRTXXXXXX-RAPPLRKKQKVGTPGGAGKGVQFEAALDPGTPAAAXXXXXXXXXXVGDDATVANGGGEGMETFSYDDVYNLATVTPVVTKRSVSRAAVESSATADEDTQQLRRPLQLGGKGKKRAAERQGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQAGPRSRPEVGKKPQRSSTAKSARKVPRYPQVLLETAGHAKARNMSDALKIAVSSEIKGLIRKRGKEPDCKAAVQACKESGMQILTHAKEICADLDPRPKVDLKEVRKALAEESQRYHAQIVSE 397
            MSTPQRGGYSSRSKGK+RGRT   X   RAPPL+KKQKVGTPGGAGKGVQFEAA DPGTPAAA            D+AT A+ GGEG++TFSYDDV NLATVTPVVTKRSVSRA VES   +                            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                    QQAGPRSRP VGKK +RSSTAKSARKVPRYPQVL ETAG+AK RNMSDALKIAV+SEIKGLIRKRGKEPDCKAAVQACK+SGMQIL HAKEICA LDPRPKVDLKEVRKALAEES+RYHAQI  E
Sbjct:    1 MSTPQRGGYSSRSKGKNRGRTTSSXSRSRAPPLQKKQKVGTPGGAGKGVQFEAAFDPGTPAAAGTAGLGRGGD--DNATGASSGGEGVDTFSYDDVSNLATVTPVVTKRSVSRAEVESGGGSAXXXXXXXXXXXX-------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPAAAGNESKSDMSNISSNGHAAAVPAVAAEGGAGVPAQQPAVAEGGDADEASSAVVDPRSALSSSKEQQAGPRSRPNVGKKTRRSSTAKSARKVPRYPQVLPETAGYAKPRNMSDALKIAVASEIKGLIRKRGKEPDCKAAVQACKDSGMQILKHAKEICAGLDPRPKVDLKEVRKALAEESRRYHAQIAEE 383

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BLAST of mRNA_E_fasciculatus_S2_contig856.16686.1 vs. uniprot
Match: D8LIH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIH4_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 5.990e-37
Identity = 72/80 (90.00%), Postives = 77/80 (96.25%), Query Frame = 0

Query:  318 MSDALKIAVSSEIKGLIRKRGKEPDCKAAVQACKESGMQILTHAKEICADLDPRPKVDLKEVRKALAEESQRYHAQIVSE 397
            MSDALKIAV++EIKGLIRKRGKEPDCKAAVQACK+SGMQ+L HAKEICADLDPRPKVDLKEVRKALAEES+RYHAQI  E
Sbjct:    1 MSDALKIAVAAEIKGLIRKRGKEPDCKAAVQACKDSGMQVLKHAKEICADLDPRPKVDLKEVRKALAEESRRYHAQIAEE 80

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig856.16686.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig856.16686.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5J880_9PHAE	9.420e-91	64.32	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LIH4_ECTSI	5.990e-37	90.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..173
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 198..397
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 174..197
None	No IPR available	TMHMM	TMhelix		coord: 174..196

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig856	contig	E_fasciculatus_S2_contig856:3..3943 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig856.16686.1	mRNA_E_fasciculatus_S2_contig856.16686.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig856 3..3943 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig856.16686.1 ID=prot_E_fasciculatus_S2_contig856.16686.1|Name=mRNA_E_fasciculatus_S2_contig856.16686.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=397bp
MSTPQRGGYSSRSKGKSRGRTTTTTTTRAPPLRKKQKVGTPGGAGKGVQF
EAALDPGTPAAAAATAGRGGGGVGDDATVANGGGEGMETFSYDDVYNLAT
VTPVVTKRSVSRAAVESSATADEDTQQLRRPLQLGGKGKKRAAERQGAAA
EGTDTEEEYESGGARRRKKRKQEAAAAAAAAAAAATATNAAAIAAALPAA
AALPAAAAAGGESKSDISNNSSNGNAAAVSAATAEGGAGAPAQQPAVAEG
GDADEAAAAVVDPRSALSSSKKQQAGPRSRPEVGKKPQRSSTAKSARKVP
RYPQVLLETAGHAKARNMSDALKIAVSSEIKGLIRKRGKEPDCKAAVQAC
KESGMQILTHAKEICADLDPRPKVDLKEVRKALAEESQRYHAQIVSE