prot_E_fasciculatus_S2_contig8506.16639.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8506.16639.1
Unique Nameprot_E_fasciculatus_S2_contig8506.16639.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length333
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig8506.16639.1 vs. uniprot
Match: D7FXY1_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXY1_ECTSI)

HSP 1 Score: 407 bits (1045), Expect = 2.320e-139
Identity = 269/335 (80.30%), Postives = 285/335 (85.07%), Query Frame = 0 
Query:    1 MPTSGRFNHPDGSLPPPERRRRLDEYGSVEDLYSYSR-GGTGGGGAGAVGGIPVHAQRSRGDIFQELMSRRAHDMITGAQDVVAGAGMIREETQRQNRALRGENDTLRVCVDMLLSEAGXXXXXXXXXXXXXX--SGVSPFESSPMQLLSAARGVRDRNHQRELALSAAAASAQSALRAERSRREGAEVEARRPGAPASXXXXXXXXXXXXXXXQVVVGRGYWGESFSMALRAFRRENGNFMNAVEDRKRAERALEEERADRLRAEAAARTXXXXXXXXXXXXXXXXXXXXXXXXXXSRTLLPCGHLVLCDRCPVVSTCPICDQQVRRTMPSTLS 332
            MPTSGRF+HPDG+LPPPERRRRLDEYGSVE+LYSYS    T  GG GA G +PVHAQRS GDIFQEL+SRRAHDMI+GAQDVVAGAGMIREETQRQNRALRGENDTLR CVDMLL+EAGXXXXXXXXXXXXXX  SGVSPF+SSPMQLLSAARGVRDRNHQRELALSAAAA+A+SALRAER+RREGAEVEAR     AS               Q VVGRGY GE+FSMALRA +RE   FM+AVEDRKRAERAL EERADR +AE AARTXXXXXXXXXXXXXXXXXXXX      SR LLPCGHLV+CDRCPVVSTCPICDQQVRRTMP TLS
Sbjct:    2 MPTSGRFSHPDGNLPPPERRRRLDEYGSVEELYSYSSTSSTSAGGRGAAG-LPVHAQRSHGDIFQELISRRAHDMISGAQDVVAGAGMIREETQRQNRALRGENDTLRACVDMLLAEAGXXXXXXXXXXXXXXXSSGVSPFQSSPMQLLSAARGVRDRNHQRELALSAAAATAESALRAERNRREGAEVEARLSREAASSSRQARGRRQNQQ--QQVVGRGYLGETFSMALRALKREKAYFMDAVEDRKRAERALAEERADRRQAETAARTXXXXXXXXXXXXXXXXXXXXCSTRRRSRALLPCGHLVMCDRCPVVSTCPICDQQVRRTMPGTLS 333
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8506.16639.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FXY1_ECTSI2.320e-13980.30RING-type domain-containing protein n=2 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 238..283
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 285..325
e-value: 2.1E-8
score: 33.9
NoneNo IPR availablePANTHERPTHR22696RING FINGER PROTEIN 26 RNF26coord: 152..327
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 281..326
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 261..328
e-value: 5.2E-11
score: 43.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 286..320
score: 8.653

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8506contigE_fasciculatus_S2_contig8506:3170..4168 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8506.16639.1mRNA_E_fasciculatus_S2_contig8506.16639.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8506 3170..6466 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8506.16639.1 ID=prot_E_fasciculatus_S2_contig8506.16639.1|Name=mRNA_E_fasciculatus_S2_contig8506.16639.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=333bp
MPTSGRFNHPDGSLPPPERRRRLDEYGSVEDLYSYSRGGTGGGGAGAVGG
IPVHAQRSRGDIFQELMSRRAHDMITGAQDVVAGAGMIREETQRQNRALR
GENDTLRVCVDMLLSEAGGSAGGGGGGSSSSSSGVSPFESSPMQLLSAAR
GVRDRNHQRELALSAAAASAQSALRAERSRREGAEVEARRPGAPASSSSS
EARGRRQNQQQQVVVGRGYWGESFSMALRAFRRENGNFMNAVEDRKRAER
ALEEERADRLRAEAAARTALEDERARREQAENLAKCVLCSSRRRSRTLLP
CGHLVLCDRCPVVSTCPICDQQVRRTMPSTLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD