prot_E_fasciculatus_S2_contig8478.16603.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8478.16603.1
Unique Nameprot_E_fasciculatus_S2_contig8478.16603.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length93
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig8478.16603.1 vs. uniprot
Match: A0A6H5JUH3_9PHAE (Conserved oligomeric Golgi complex subunit 4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUH3_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 3.140e-38
Identity = 71/80 (88.75%), Postives = 75/80 (93.75%), Query Frame = 0 
Query:   14 MQAPFDPEGNGAPSNDMAVLQESPAAPGKHAQDGSGGPLEATFEERFEQFYLQLAEGKTGGMVACVDEMQRIVDSTRQRQ 93
            MQAPFD EGNG+PS+D  VLQE+PAAPG HAQDGSGG LEATFEERFEQFYLQLAEGKTGGMVACVDEMQRIVDSTRQR+
Sbjct:    1 MQAPFDAEGNGSPSDDTDVLQENPAAPGAHAQDGSGGLLEATFEERFEQFYLQLAEGKTGGMVACVDEMQRIVDSTRQRE 80
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8478.16603.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JUH3_9PHAE3.140e-3888.75Conserved oligomeric Golgi complex subunit 4 n=1 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8478contigE_fasciculatus_S2_contig8478:1663..2446 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8478.16603.1mRNA_E_fasciculatus_S2_contig8478.16603.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8478 1663..2446 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8478.16603.1 ID=prot_E_fasciculatus_S2_contig8478.16603.1|Name=mRNA_E_fasciculatus_S2_contig8478.16603.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=93bp
VGWCTKKHSRACPMQAPFDPEGNGAPSNDMAVLQESPAAPGKHAQDGSGG
PLEATFEERFEQFYLQLAEGKTGGMVACVDEMQRIVDSTRQRQ
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