prot_E_fasciculatus_S2_contig8394.16526.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8394.16526.1
Unique Nameprot_E_fasciculatus_S2_contig8394.16526.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length126
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig8394.16526.1 vs. uniprot
Match: D8LBR1_ECTSI (RING-CH-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBR1_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 4.980e-38
Identity = 74/81 (91.36%), Postives = 76/81 (93.83%), Query Frame = 0 
Query:    1 MVLIPTVVSLVAGAWMGAGSADGQFVQLGHFRAALWALTLTRASAYLIHPVRAWLTALHDSVRDDRYLVGMRLQDHSDKAQ 81
            MVLIPTVVSLVAG WM A  ADGQFVQLGHFRAAL+ALTLTRASAYLI PVRAWLTALHDSVRDDRYLVGMRLQDHSDK+Q
Sbjct: 1204 MVLIPTVVSLVAGTWMDAYGADGQFVQLGHFRAALFALTLTRASAYLIQPVRAWLTALHDSVRDDRYLVGMRLQDHSDKSQ 1284
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8394.16526.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBR1_ECTSI4.980e-3891.36RING-CH-type domain-containing protein n=1 Tax=Ect... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..125
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.547

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8394contigE_fasciculatus_S2_contig8394:4145..6153 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8394.16526.1mRNA_E_fasciculatus_S2_contig8394.16526.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8394 4083..6215 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8394.16526.1 ID=prot_E_fasciculatus_S2_contig8394.16526.1|Name=mRNA_E_fasciculatus_S2_contig8394.16526.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=126bp
MVLIPTVVSLVAGAWMGAGSADGQFVQLGHFRAALWALTLTRASAYLIHP
VRAWLTALHDSVRDDRYLVGMRLQDHSDKAQQADASPDSESAGYVARARA
MAATPGNTAVAPAAAAAAAAAADVR*
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