prot_E_fasciculatus_S2_contig8356.16491.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8356.16491.1
Unique Nameprot_E_fasciculatus_S2_contig8356.16491.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length282
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig8356.16491.1 vs. uniprot
Match: D7FNG7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNG7_ECTSI)

HSP 1 Score: 427 bits (1099), Expect = 5.220e-143
Identity = 246/267 (92.13%), Postives = 251/267 (94.01%), Query Frame = 0 
Query:   20 QAMLQEFLRSRDGNEMIGDLSEGLEARRDDLICPDPSRCHPRTPEDRAALQSGTVVVKGFRAKLPPQAVSELVVMSDELDINEVVCVELWSQVNEPWQRRALEKRLSDPAGSLSEDLPLAARKLFYLERRNLLMFEAELFKAALVEDLSPAKKAVIDREIFSLLEKDLASNLMSFVAKLLGPEGIRRTTPPSSTAATVGSSQQPGAQTGLFGAAPAA-AAPXXXXXXXXXXXXXXXX---EGAAERREEFMLDSLVCAVEVLFFIYY 282
            QAMLQEFLRSR+GNEMIGDLSEGLEARRDDLICPDPSRCHPRTPEDRAALQSG+VVVKGFRAKLPPQAVSELV +SDELDINEVVCV+LWSQVNEPWQRRALEKRLSDPAGSLSEDLPLAARKLFYLERRNLLMFEAELFKAALVEDLSPAKKAVIDREIFSLLEKDLASNLMSFVAKLLGPEGIRRTT PSSTAA +GSSQ  GA TGLFGAAPAA AAP      XXXXXXXXXX   EGAAERREEFMLDSLVCAVEVLFFIYY
Sbjct:   11 QAMLQEFLRSREGNEMIGDLSEGLEARRDDLICPDPSRCHPRTPEDRAALQSGSVVVKGFRAKLPPQAVSELVALSDELDINEVVCVDLWSQVNEPWQRRALEKRLSDPAGSLSEDLPLAARKLFYLERRNLLMFEAELFKAALVEDLSPAKKAVIDREIFSLLEKDLASNLMSFVAKLLGPEGIRRTTSPSSTAAMLGSSQA-GAPTGLFGAAPAATAAPAPGQAGXXXXXXXXXXSMSEGAAERREEFMLDSLVCAVEVLFFIYY 276
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BLAST of mRNA_E_fasciculatus_S2_contig8356.16491.1 vs. uniprot
Match: A0A6H5L7W6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W6_9PHAE)

HSP 1 Score: 394 bits (1011), Expect = 5.680e-136
Identity = 236/280 (84.29%), Postives = 240/280 (85.71%), Query Frame = 0 
Query:    3 QSQDAVGLDHNVSLTDLQAMLQEFLRSRDGNEMIGDLSEGLEARRDDLICPDPSRCHPRTPEDRAALQSGTVVVKGFRAKLPPQAVSELVVMSDELDINEVVCVELWSQVNEPWQRRALEKRLSDPAGSLSEDLPLAARKLFYLERRNLLMFEAELFKAALVEDLSPAKKAVIDREIFSLLEKDLASNLMSFVAKLLGPEGIRRTTPPSSTAATVGSSQQPGAQTGLFGAAPAAAAPXXXXXXXXXXXXXXXXEGAAERREEFMLDSLVCAVEVLFFIYY 282
            +SQDAVGLDH+VSLTDLQAMLQEFLRSRDGNEMIGDLSEGLEARRDDLICPDPSRCHPRTPEDR ALQSG+VVVKGFRAK                             VNEPWQRRALEKRLSDPAGSLSEDLPLAARKLFYLERRNLLMFEAELFKAALVEDLSPAKKAVIDREIFSLLEKDLASNLMSFVAKLLGPEGIRRTTPP+STAATVGSSQ  GA TGLFGAAPA      XXXXXXXXXXXXX EGAAERREEFMLDSLVCAVEVLFFIYY
Sbjct:    2 ESQDAVGLDHDVSLTDLQAMLQEFLRSRDGNEMIGDLSEGLEARRDDLICPDPSRCHPRTPEDRTALQSGSVVVKGFRAK-----------------------------VNEPWQRRALEKRLSDPAGSLSEDLPLAARKLFYLERRNLLMFEAELFKAALVEDLSPAKKAVIDREIFSLLEKDLASNLMSFVAKLLGPEGIRRTTPPTSTAATVGSSQA-GAPTGLFGAAPA------XXXXXXXXXXXXXSEGAAERREEFMLDSLVCAVEVLFFIYY 245
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8356.16491.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNG7_ECTSI5.220e-14392.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7W6_9PHAE5.680e-13684.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021827Nucleoporin Nup186/Nup192/Nup205PFAMPF11894Nup192coord: 35..174
e-value: 3.9E-8
score: 31.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8356contigE_fasciculatus_S2_contig8356:1039..5327 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8356.16491.1mRNA_E_fasciculatus_S2_contig8356.16491.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8356 1039..5327 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8356.16491.1 ID=prot_E_fasciculatus_S2_contig8356.16491.1|Name=mRNA_E_fasciculatus_S2_contig8356.16491.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=282bp
MEQSQDAVGLDHNVSLTDLQAMLQEFLRSRDGNEMIGDLSEGLEARRDDL
ICPDPSRCHPRTPEDRAALQSGTVVVKGFRAKLPPQAVSELVVMSDELDI
NEVVCVELWSQVNEPWQRRALEKRLSDPAGSLSEDLPLAARKLFYLERRN
LLMFEAELFKAALVEDLSPAKKAVIDREIFSLLEKDLASNLMSFVAKLLG
PEGIRRTTPPSSTAATVGSSQQPGAQTGLFGAAPAAAAPAPGQAGGAAAG
AGGVSEGAAERREEFMLDSLVCAVEVLFFIYY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021827Nup186/Nup192/Nup205