prot_E_fasciculatus_S2_contig8341.16478.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8341.16478.1
Unique Nameprot_E_fasciculatus_S2_contig8341.16478.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length231
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8341.16478.1 vs. uniprot
Match: D7FVT2_ECTSI (RNase_PH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVT2_ECTSI)

HSP 1 Score: 401 bits (1031), Expect = 1.530e-140
Identity = 223/230 (96.96%), Postives = 225/230 (97.83%), Query Frame = 0
Query:    1 MEETRRDGRRGNQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKALRMERPEGATLDVSFKPESGITSPADAESEALLRRSLEEVVLRSRYPRTVVSVIIQVIVDDGAVLSAALNAATMALLNAGVEMTGMALSVTCCITAPVSGRSVLLDPCKAEEIDAAATAVVATLSAGGGVLSCRAVGSMSQEEYFACCEAASLGTTAVRSFVRLSAEQKVNREAETLR 230
            MEETRRDGRR NQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAK+LRMER EGATLDVSFKPESGITS ADAESEALLRRSLEEVVLRSRYPRTVVSVIIQVIVDDGAVLSAALNAATMALLNAGVEMTGMALSVTCCITA VSGRSVLLDPCKAEEIDAAATAVVATLSAGGGVLSC AVGSMSQEEYFACCEAASLGTTAVRSFVRLSAEQKVNREAET+R
Sbjct:    1 MEETRRDGRRANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKSLRMERSEGATLDVSFKPESGITSSADAESEALLRRSLEEVVLRSRYPRTVVSVIIQVIVDDGAVLSAALNAATMALLNAGVEMTGMALSVTCCITATVSGRSVLLDPCKAEEIDAAATAVVATLSAGGGVLSCHAVGSMSQEEYFACCEAASLGTTAVRSFVRLSAEQKVNREAETVR 230          
BLAST of mRNA_E_fasciculatus_S2_contig8341.16478.1 vs. uniprot
Match: A0A835ZF16_9STRA (Ribosomal protein S5 domain 2-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF16_9STRA)

HSP 1 Score: 182 bits (462), Expect = 6.530e-54
Identity = 112/236 (47.46%), Postives = 150/236 (63.56%), Query Frame = 0
Query:    7 DGRRGNQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKALRMERPEGATLDVSFKPESGITSPADAESEALLRRSLEEVVLRSRYPRTVVSVIIQVIVDDGAVLSAALNAATMALLNAGVEMTGMALSVTCCITAPVS------------GRSVL-LDPCKAEEIDAAATAVVATLSAGGGVLSCRAVGSMSQEEYFACCEAASLGTTAVRSFVRLSAEQKVNREAETL 229
            DGR G+QIR L A+QGILNRADGS RF  GNTSVL AVYGPA     + E+P+ A ++VS++ + G  + ADAE E  +RR+LEE V  +RYPR+V+SV++QV+ DDG+VLSAA+NA  MAL++AGVEM GM ++ T C +   S            G S L LDP  +EE    AT ++A L+   G+L+ +  G +  EE FA  EAA     AV  ++R + E KV R+   L
Sbjct:    8 DGRTGDQIRGLFADQGILNRADGSVRFGAGNTSVLVAVYGPAQPAQQKKEKPDRAIIEVSWRADKGAQTSADAERELYVRRTLEEAVAVARYPRSVISVVVQVLCDDGSVLSAAINACAMALVDAGVEMIGMPVAATACFSGSGSAAAAAPEQLQHLGESHLQLDPSASEEATTRATVMLAVLAGSDGILTMKMTGQLGAEELFAASEAARKACDAVSVYLRRAVEAKVLRDVANL 243          
BLAST of mRNA_E_fasciculatus_S2_contig8341.16478.1 vs. uniprot
Match: A0A067CJ13_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CJ13_SAPPC)

HSP 1 Score: 176 bits (446), Expect = 9.280e-52
Identity = 103/220 (46.82%), Postives = 140/220 (63.64%), Query Frame = 0
Query:    5 RRDGRRGNQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKALRMERPEGATLDVSFKPESGITSPADAESEALLRRSLEEVVLRSRYPRTVVSVIIQVIVDDGAVLSAALNAATMALLNAGVEMTGMALSVTCCITAPVSGRSVLLDPCKAEEIDAAATAVVATLSAGGGVLSCRAVGSMSQEEYFACCEAASLGTTAVRSFVRLSAEQKVNR 224
            R DGR   +IRPLA EQG+LNRADGSARF  G TSVLA+V GPA AK  R E+  GATL+V+FK E G  S  D E E +LR + E +++   +PR VVS+ +QV+ DDGA+L+ A+NA  +AL++AGV M  +  ++TC I   +    + LDP ++E   AAAT   A      G+L+    G +S+E+YFAC E       +V +FVR+S E K N+
Sbjct:    7 REDGRLVQEIRPLACEQGLLNRADGSARFNHGTTSVLASVSGPAAAKLRRQEKATGATLEVTFKAEKGAPSARDKEYEMILRETFEPIIVLENFPRAVVSITVQVVEDDGALLAVAINAVNLALIDAGVPMRSIVGAITCSI---LEDGQLCLDPSRSEGETAAATVTTACCGNNDGILTSMTSGVLSEEQYFACSEICRRAIDSVLAFVRISQESKFNK 223          
BLAST of mRNA_E_fasciculatus_S2_contig8341.16478.1 vs. uniprot
Match: A0A1V9ZII6_9STRA (Exosome component Rrp46 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZII6_9STRA)

HSP 1 Score: 174 bits (441), Expect = 5.430e-51
Identity = 104/220 (47.27%), Postives = 141/220 (64.09%), Query Frame = 0
Query:    2 EETRRDGRRGNQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKALRMERPEGATLDVSFKPESGITSPADAESEALLRRSLEEVVLRSRYPRTVVSVIIQVIVDDGAVLSAALNAATMALLNAGVEMTGMALSVTCCITAPVSGRSVLLDPCKAEEIDAAATAVVATLSAGGGVLSCRAVGSMSQEEYFACCEAASLGTTAVRSFVRLSAEQK 221
            E+ R DGR   +IRPLA EQG+LNRADGS+RF  G TSVLA+V GPA AK  R E+   ATL+V FKPE G  S  D E E +LR++ E ++L   +PR V+SV +QV+ DDGA+L+ A+NA  +ALL+AGV M G+  ++TC I   +    + LDP  +E   AAAT   A+     GVL+    G +++ +YFAC E    G  +V +FVR++ E K
Sbjct:    5 EDRREDGRLVQEIRPLACEQGLLNRADGSSRFNHGTTSVLASVSGPAAAKLRRQEKMHCATLEVVFKPEKGAASARDKEYEMILRQTFEPIILLENFPRAVISVTVQVVEDDGALLAVAINAVNLALLDAGVPMRGIVGAITCTI---LEDGQLCLDPSLSEGEAAAATVTTASCGNSDGVLTSMTSGVLTEAQYFACSEICRRGIDSVLAFVRIAQETK 221          
BLAST of mRNA_E_fasciculatus_S2_contig8341.16478.1 vs. uniprot
Match: A0A485KL27_9STRA (Aste57867_8748 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KL27_9STRA)

HSP 1 Score: 171 bits (433), Expect = 9.250e-50
Identity = 102/226 (45.13%), Postives = 140/226 (61.95%), Query Frame = 0
Query:    2 EETRRDGRRGNQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKALRMERPEGATLDVSFKPESGITSPADAESEALLRRSLEEVVLRSRYPRTVVSVIIQVIVDDGAVLSAALNAATMALLNAGVEMTGMALSVTCCITAPVSGRSVLLDPCKAEEIDAAATAVVATLSAGGGVLSCRAVGSMSQEEYFACCEAASLGTTAVRSFVRLSAEQKVNREAE 227
            +E R DGR   +IRPL+ EQG+LNRADGSARF  G TSVLA+V GPA AK  R E+ + ATL+V FK E G  +  D E EA+LR++ E +V    YPR V+S+ +QV+ DDG++L+ A+NA  +ALL+AG+ M  +  ++TC I   +    + LDP + E   AAAT   A      G+L+    G +S+ +YFAC E       +V SFVR+S E K  +  E
Sbjct:    5 DERRGDGRLVQEIRPLSCEQGLLNRADGSARFSHGTTSVLASVNGPAAAKIRRQEKVDEATLEVVFKAEKGAPTARDKEYEAILRQTFEPIVYLENYPRAVISITVQVVEDDGSLLAVAINAVNLALLDAGIPMRCLVGAITCSI---LEDGQLCLDPARVEGETAAATVTSACAGNNDGILTSLTTGMLSESQYFACSEICRRAVDSVLSFVRISQETKFQKALE 227          
BLAST of mRNA_E_fasciculatus_S2_contig8341.16478.1 vs. uniprot
Match: A0A024TBK6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024TBK6_9STRA)

HSP 1 Score: 157 bits (397), Expect = 2.560e-44
Identity = 93/226 (41.15%), Postives = 138/226 (61.06%), Query Frame = 0
Query:    1 MEETRRDGRRGNQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKALRMERPEGATLDVSFKPESGITSPADAESEALLRRSLEEVVLRSRYPRTVVSVIIQVIVDDGAVLSAALNAATMALLNAGVEMTGMALSVTCCITAPVSGRSVLLDPCKAEEIDAAATAVVATLSAGGGVLSCRAVGSMSQEEYFACCEAASLGTTAVRSFVRLSAEQKVNREA 226
             E+ R DGR   +IRPL+ EQG+LNRADGSARF  G+TSVLA+V GPA AK  R E+ + AT++V FK + G  +  D E EA+L+++ + +V    YPR V+S+ +QV+ DDG++L+ A+NA  +ALL+AG+ M  +  ++TC I   +    + LDP   E   A A+   A      G+L+    G +++ +YFA  E       +V SFVR++ E K  + A
Sbjct:    6 QEDRRDDGRLVQEIRPLSCEQGLLNRADGSARFCHGSTSVLASVNGPAAAKIRRHEKVDAATVEVVFKSDKGAPTARDKEYEAILKQTFDPIVYVENYPRAVISITVQVVEDDGSLLAVAINAVNLALLDAGIPMRSLVGAITCSI---LDDGQLCLDPSLTEGDAATASVTAAYAGKNDGILTSITTGLVNESQYFAASEICRRAIDSVLSFVRIAQESKFQKNA 228          
BLAST of mRNA_E_fasciculatus_S2_contig8341.16478.1 vs. uniprot
Match: A0A833WKX0_PHYIN (3' exoribonuclease family domain 2 n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WKX0_PHYIN)

HSP 1 Score: 156 bits (395), Expect = 9.510e-44
Identity = 94/225 (41.78%), Postives = 140/225 (62.22%), Query Frame = 0
Query:    5 RRDGRRGNQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKALRMERPEGATLDVSFKPESGITSPADAESEALLRRSLEEVVLRSRYPRTVVSVIIQVIVDDGAV--------LSAALNAATMALLNAGVEMTGMALSVTCCITAPVSGRSVLLDPCKAEEIDAAATAVVATLSAGGGVLSCRAVGSMSQEEYFACCEAASLGTTAVRSFVRLSAEQK 221
            R+DGR GN++RP A+EQG L RADGSAR   G+++VLAAVYGP  A+  R E  + ATLDV FK E GI +  + E E ++R++   VVL   +PR V+S+++QVI D+G++         + A+NA ++AL++AGV M  +  + +C I       ++ LDP  AEE +A +    A  S   GVL+C   G +S+E+YFAC EA    + +V +F R+  ++K
Sbjct:   22 RQDGRAGNELRPFASEQGALFRADGSARMSHGSSTVLAAVYGPGQARNWRAENTDKATLDVCFKLEKGIMTSKEKEYEQIIRQTFAPVVLTDSFPRAVISIVVQVIEDNGSISFPLFLIIAALAINAVSLALMDAGVPMLSVVTATSCSI---FDDGNLYLDPTAAEEEEAVSWVTTARSSTSDGVLTCITNGLLSEEQYFACSEACQRASESVAAFFRIVQQKK 243          
BLAST of mRNA_E_fasciculatus_S2_contig8341.16478.1 vs. uniprot
Match: A0A1V9ZVY3_9STRA (U4/U6 small nuclear ribonucleoprotein Prp4 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZVY3_9STRA)

HSP 1 Score: 164 bits (416), Expect = 2.430e-43
Identity = 94/217 (43.32%), Postives = 136/217 (62.67%), Query Frame = 0
Query:    5 RRDGRRGNQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKALRMERPEGATLDVSFKPESGITSPADAESEALLRRSLEEVVLRSRYPRTVVSVIIQVIVDDGAVLSAALNAATMALLNAGVEMTGMALSVTCCITAPVSGRSVLLDPCKAEEIDAAATAVVATLSAGGGVLSCRAVGSMSQEEYFACCEAASLGTTAVRSFVRLSAEQK 221
            R DGR   +IRPLA EQG+LNRADGSARF  G TSV+A+V GPAPAK  R E    ATLDV FK E G+ +  D E E +LR++ E ++L   +PRTV+S+ +QV+ DDG++L+ ++NA  +AL++AG+ M  +  ++TC +   +    + +DP   E   A AT   A  +    +L+    G +++E+YFAC E       +V +FVR+S E K
Sbjct:  504 REDGRSVQEIRPLACEQGLLNRADGSARFNHGTTSVMASVSGPAPAKIRRQENVNQATLDVVFKAEKGVATARDKEYELILRQTFEPIILLENFPRTVISITVQVVEDDGSLLAVSINAINLALMDAGIPMRSVVGAITCSV---LEDSQLCIDPSLVENDTATATVTTACSANNHQILTSFTSGILTEEQYFACSEICRRAIDSVIAFVRISQESK 717          
BLAST of mRNA_E_fasciculatus_S2_contig8341.16478.1 vs. uniprot
Match: A0A6G0WBP6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WBP6_9STRA)

HSP 1 Score: 153 bits (387), Expect = 7.910e-43
Identity = 98/220 (44.55%), Postives = 133/220 (60.45%), Query Frame = 0
Query:    3 ETRR-DGRRGNQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKALRMERPEGATLDVSFKPESGITSPADAESEALLRRSLEEVVLRSRYPRTVVSVIIQVIVDDGAVLSAALNAATMALLNAGVEMTGMALSVTCCITAPVSGRSVLLDPCKAEEIDAAATAVVATLSAGGGVLSCRAVGSMSQEEYFACCEAASLGTTAVRSFVRLSAEQK 221
            ETRR DGR   +IRPL+ EQ +LNRADGSARF  G +SVLA+V GPA AK  R E+   A+L+V+FK E G  +  D E EA+LR++ E ++    +PR V+SV +QV+ DDG++LS A+NA  +ALL+AG+ M  +  +VTC I   +      LD    E   A A+   A      G+L+    G +S+  YFAC E       +V SFVR+S E K
Sbjct:    6 ETRREDGRLVQEIRPLSCEQSLLNRADGSARFSHGTSSVLASVNGPAAAKIRRQEKVSCASLEVTFKAEKGAPTARDKEYEAILRQTFEPIIYLENFPRAVISVTVQVVEDDGSLLSVAINAMNLALLDAGIPMRCLVGAVTCSI---LDDGQFCLDSSLTEGEAAVASVTSACAGNNDGILTSLTTGVLSESHYFACSEICRRAVGSVLSFVRISQETK 222          
BLAST of mRNA_E_fasciculatus_S2_contig8341.16478.1 vs. uniprot
Match: Q54Q83_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54Q83_DICDI)

HSP 1 Score: 152 bits (385), Expect = 2.030e-42
Identity = 88/221 (39.82%), Postives = 141/221 (63.80%), Query Frame = 0
Query:    2 EETRRDGRRGNQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKALRMERPEGATLDVSFKPESGITSPADAESEALLRRSLEEVVLRSRYPRTVVSVIIQVIVDDGAVLSAALNAATMALLNAGVEMTGMALSVTCCITAPVSGRSVLLDPCKAEEIDAAATAVVATLSAGGGVLSCRAVGSMSQEEYFACCEAASLGTTAVRSFVRLSAEQKV 222
            E TR DGR  N IRP+ +EQG LN+ADGSA+F Q  + VLAAVYGP    + R E+   + ++V+F P  G T+  D E E L++ ++E ++L + YPRT +SVI+QV  DDG+++S A+NAA +ALL+AG+EM G+  SVT C     +  S+ +DP   EE  + A A+ +  S    ++  + +G++++++YF   + AS     + SF++L+ + ++
Sbjct:    4 EHTRNDGRCENSIRPVESEQGSLNKADGSAKFSQDKSKVLAAVYGPIEVNSARKEKILKSYVEVTFTPAFGNTNYIDKEKELLIKNAVESMILTTLYPRTQISVILQVFSDDGSIVSCAINAACLALLDAGIEMNGLLGSVTLCFN---NDGSIYVDPSTEEENQSKAIAIYSFSSINKNIVLSKTIGTLTEDQYFKGLDKASESCDLIISFIKLAVKNRI 221          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8341.16478.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVT2_ECTSI1.530e-14096.96RNase_PH domain-containing protein n=2 Tax=Ectocar... [more]
A0A835ZF16_9STRA6.530e-5447.46Ribosomal protein S5 domain 2-type protein n=1 Tax... [more]
A0A067CJ13_SAPPC9.280e-5246.82Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1V9ZII6_9STRA5.430e-5147.27Exosome component Rrp46 n=1 Tax=Achlya hypogyna Ta... [more]
A0A485KL27_9STRA9.250e-5045.13Aste57867_8748 protein n=1 Tax=Aphanomyces stellat... [more]
A0A024TBK6_9STRA2.560e-4441.15Uncharacterized protein n=2 Tax=Aphanomyces TaxID=... [more]
A0A833WKX0_PHYIN9.510e-4441.783' exoribonuclease family domain 2 n=1 Tax=Phytoph... [more]
A0A1V9ZVY3_9STRA2.430e-4343.32U4/U6 small nuclear ribonucleoprotein Prp4 n=1 Tax... [more]
A0A6G0WBP6_9STRA7.910e-4344.55Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
Q54Q83_DICDI2.030e-4239.82Uncharacterized protein n=1 Tax=Dictyostelium disc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027408PNPase/RNase PH domain superfamilyGENE3D3.30.230.70coord: 1..229
e-value: 9.3E-57
score: 194.2
IPR001247Exoribonuclease, phosphorolytic domain 1PFAMPF01138RNase_PHcoord: 13..134
e-value: 4.5E-23
score: 82.2
NoneNo IPR availablePANTHERPTHR11953EXOSOME COMPLEX COMPONENTcoord: 5..224
NoneNo IPR availablePANTHERPTHR11953:SF1EXOSOME COMPLEX COMPONENT RRP46coord: 5..224
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 2..164
IPR036345Exoribonuclease, PH domain 2 superfamilySUPERFAMILY55666Ribonuclease PH domain 2-likecoord: 135..222

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8341contigE_fasciculatus_S2_contig8341:2117..3840 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8341.16478.1mRNA_E_fasciculatus_S2_contig8341.16478.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8341 81..3840 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8341.16478.1 ID=prot_E_fasciculatus_S2_contig8341.16478.1|Name=mRNA_E_fasciculatus_S2_contig8341.16478.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=231bp
MEETRRDGRRGNQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPA
KALRMERPEGATLDVSFKPESGITSPADAESEALLRRSLEEVVLRSRYPR
TVVSVIIQVIVDDGAVLSAALNAATMALLNAGVEMTGMALSVTCCITAPV
SGRSVLLDPCKAEEIDAAATAVVATLSAGGGVLSCRAVGSMSQEEYFACC
EAASLGTTAVRSFVRLSAEQKVNREAETLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036345ExoRNase_PH_dom2_sf
IPR020568Ribosomal_S5_D2-typ_fold
IPR001247ExoRNase_PH_dom1
IPR027408PNPase/RNase_PH_dom_sf