prot_E_fasciculatus_S2_contig829.16436.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig829.16436.1
Unique Name	prot_E_fasciculatus_S2_contig829.16436.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	170

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig829.16436.1 vs. uniprot
Match: A0A6H5JWV5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JWV5_9PHAE)

HSP 1 Score: 334 bits (857), Expect = 4.990e-116
Identity = 163/169 (96.45%), Postives = 165/169 (97.63%), Query Frame = 0

Query:    1 MTVNVPWSTLRPNPRDQRERAAAEFPGGGEAPPLDKDGEAEIAWDVTDFGKRMAFGGIVGGVTGITFGAMDGHRAIRDDSTGKFPTTALKTKEFTRLTALSGTIFTGFFCTYQGMKYGAKLARKEDDFWNVLIASVGSFAPMLAVPAMRSRYPYAAILIAMDTLNNHVL 169
            MTVNVPWSTLRPNPRDQRERAAAEFPGGG+APPLDKDGE EIAWDVTDFGKRMAFGGIVGGVTGITFGAMDGHRAIRDDS GKFPTTALKTKEFTRLTALSGTIFTGFFCTYQGMKYGAKLARKEDDFWNVLIAS GSFAPML VPAMRSRYPYAAILIAMDTLNNH+L
Sbjct:    1 MTVNVPWSTLRPNPRDQRERAAAEFPGGGKAPPLDKDGEPEIAWDVTDFGKRMAFGGIVGGVTGITFGAMDGHRAIRDDSMGKFPTTALKTKEFTRLTALSGTIFTGFFCTYQGMKYGAKLARKEDDFWNVLIASAGSFAPMLVVPAMRSRYPYAAILIAMDTLNNHIL 169

[Close]

BLAST of mRNA_E_fasciculatus_S2_contig829.16436.1 vs. uniprot
Match: A0A835YQU0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQU0_9STRA)

HSP 1 Score: 147 bits (371), Expect = 4.350e-42
Identity = 81/167 (48.50%), Postives = 108/167 (64.67%), Query Frame = 0

Query:    3 VNVPWSTLRPNPRDQRERAAAEFPGGGEAPPLDKDGEAEIAWDVTDFGKRMAFGGIVGGVTGITFGAMDGHRAIRDDSTGKFPTTALKTKEFTRLTALSGTIFTGFFCTYQGMKYGAKLARKEDDFWNVLIASVGSFAPMLAVPAMRSRYPYAAILIAMDTLNNHVL 169
            VNVPW  LR NPR +R+R + E     E+ P + D      +D+    +++ FG   GGVTGI FG MD HR I    TG+F T A K KE TR+TA +GT+F G+F  YQG+KYG +  R ED F+NV +A+  S AP++  PA+R+R PY A L+A+DTLN+HVL
Sbjct:    6 VNVPWRELRHNPRTERDRLS-EAELSDESKP-ESDATFMDRFDMGMMNRKLIFGVACGGVTGIMFGLMDSHRVI--SKTGQFFTLAAKVKETTRMTAFTGTVFGGYFAAYQGIKYGIQAYRGEDTFFNVFMATAISIAPVVPFPALRARLPYMAFLVAIDTLNSHVL 168

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig829.16436.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig829.16436.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JWV5_9PHAE	4.990e-116	96.45	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835YQU0_9STRA	4.350e-42	48.50	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 74..93
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 116..126
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 127..145
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 53..73
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 94..115
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 146..169
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..52
None	No IPR available	TMHMM	TMhelix		coord: 97..115
None	No IPR available	TMHMM	TMhelix		coord: 128..147
None	No IPR available	TMHMM	TMhelix		coord: 54..76

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig829	contig	E_fasciculatus_S2_contig829:17086..19051 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig829.16436.1	mRNA_E_fasciculatus_S2_contig829.16436.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig829 16989..19604 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig829.16436.1 ID=prot_E_fasciculatus_S2_contig829.16436.1|Name=mRNA_E_fasciculatus_S2_contig829.16436.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=170bp
MTVNVPWSTLRPNPRDQRERAAAEFPGGGEAPPLDKDGEAEIAWDVTDFG
KRMAFGGIVGGVTGITFGAMDGHRAIRDDSTGKFPTTALKTKEFTRLTAL
SGTIFTGFFCTYQGMKYGAKLARKEDDFWNVLIASVGSFAPMLAVPAMRS
RYPYAAILIAMDTLNNHVL*