prot_E_fasciculatus_S2_contig824.16389.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig824.16389.1
Unique Nameprot_E_fasciculatus_S2_contig824.16389.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length99
Homology
BLAST of mRNA_E_fasciculatus_S2_contig824.16389.1 vs. uniprot
Match: A0A6H5L0N8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0N8_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 1.350e-53
Identity = 97/99 (97.98%), Postives = 99/99 (100.00%), Query Frame = 0
Query:    1 CGVTSGGRGRRSLAGLRSLALTLKAAPPRLVVLDLGHNFIDDSAIEVIATGLEENRVLTNLILQGNGIGEKGMTILAAALPSSIVELDLSNNPAVGEKG 99
            CGVTSGGRGRRSLAGLRSLALTLKAAPPRLVVLD+GHNFIDDSAIEVIATGLEENRVLTNLILQGNGIG+KGMTILAAALPSSIVELDLSNNPAVGEKG
Sbjct:  210 CGVTSGGRGRRSLAGLRSLALTLKAAPPRLVVLDIGHNFIDDSAIEVIATGLEENRVLTNLILQGNGIGDKGMTILAAALPSSIVELDLSNNPAVGEKG 308          
BLAST of mRNA_E_fasciculatus_S2_contig824.16389.1 vs. uniprot
Match: D7FM61_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM61_ECTSI)

HSP 1 Score: 187 bits (475), Expect = 4.670e-53
Identity = 96/99 (96.97%), Postives = 98/99 (98.99%), Query Frame = 0
Query:    1 CGVTSGGRGRRSLAGLRSLALTLKAAPPRLVVLDLGHNFIDDSAIEVIATGLEENRVLTNLILQGNGIGEKGMTILAAALPSSIVELDLSNNPAVGEKG 99
            CGVTSGGRGRRSLAGLRSLALTLKA PPRLVVLD+GHNFIDDSAIEVIATGLEENRVLTNLILQGNGIG+KGMTILAAALPSSIVELDLSNNPAVGEKG
Sbjct:  286 CGVTSGGRGRRSLAGLRSLALTLKAGPPRLVVLDIGHNFIDDSAIEVIATGLEENRVLTNLILQGNGIGDKGMTILAAALPSSIVELDLSNNPAVGEKG 384          
BLAST of mRNA_E_fasciculatus_S2_contig824.16389.1 vs. uniprot
Match: A0A4W6BWN3_LATCA (Uncharacterized LOC108891710 n=14 Tax=Lates calcarifer TaxID=8187 RepID=A0A4W6BWN3_LATCA)

HSP 1 Score: 53.9 bits (128), Expect = 3.290e-6
Identity = 42/93 (45.16%), Postives = 54/93 (58.06%), Query Frame = 0
Query:   12 SLAGLRSLALTLKAAPPRLVVLDLGHNFIDDSAIEVIATGLEENRV-LTNLILQGNGIGEKGMTILAAALPSS----IVELDLSNNPAVGEKG 99
            S  GL SL LT  +A   L  LDL HN + DS +EV+A GL++    L  L L G  + EKG + LA+AL S+    + +LDLS N   GEKG
Sbjct: 2125 SCKGLTSLVLT--SASSNLTKLDLSHNDLLDSGVEVLANGLKDLHCKLETLKLSGCQVTEKGCSDLASALTSNTASHLKQLDLSYNHP-GEKG 2214          
BLAST of mRNA_E_fasciculatus_S2_contig824.16389.1 vs. uniprot
Match: UPI00187C6BCF (NACHT, LRR and PYD domains-containing protein 14-like isoform X3 n=3 Tax=Acanthopagrus latus TaxID=8177 RepID=UPI00187C6BCF)

HSP 1 Score: 52.8 bits (125), Expect = 8.170e-6
Identity = 33/78 (42.31%), Postives = 46/78 (58.97%), Query Frame = 0
Query:   19 LALTLKAAPPRLVVLDLGHNFIDDSAIEVIATGLEE-NRVLTNLILQGNGIGEKGMTILAAAL---PSSIVELDLSNN 92
            +A  LK+ P  L  LDL HN+++DS ++++ +GLE  N  L NL   G  + E     LA+AL   PS +  LDLSNN
Sbjct:  727 VASALKSNPSHLTHLDLSHNYLNDSGVKLLCSGLESPNCRLENLKFFGCNLSEISCDSLASALKSNPSHLRHLDLSNN 804          
BLAST of mRNA_E_fasciculatus_S2_contig824.16389.1 vs. uniprot
Match: UPI0020150B4A (NACHT, LRR and PYD domains-containing protein 3-like n=1 Tax=Alosa alosa TaxID=278164 RepID=UPI0020150B4A)

HSP 1 Score: 51.2 bits (121), Expect = 2.880e-5
Identity = 32/84 (38.10%), Postives = 50/84 (59.52%), Query Frame = 0
Query:   19 LALTLKAAPPRLVVLDLGHNFIDDSAIEVIATGLEENRV-LTNLILQGNGIGEKGMTILAAAL--PSSIVELDLSNNPAVGEKG 99
            +  T+  +P  L+ LDL HN + DS +++I+TGL  +   L  L   G  + EK   I+A  L  P+S++ELDLS+N  +G+ G
Sbjct:  842 IVATVLQSPNSLIELDLSHNDLRDSGVQLISTGLYSSHCKLQALRFAGCKLSEKSCGIVATVLQSPNSLIELDLSHND-LGDSG 924          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig824.16389.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5L0N8_9PHAE1.350e-5397.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FM61_ECTSI4.670e-5396.97Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A4W6BWN3_LATCA3.290e-645.16Uncharacterized LOC108891710 n=14 Tax=Lates calcar... [more]
UPI00187C6BCF8.170e-642.31NACHT, LRR and PYD domains-containing protein 14-l... [more]
UPI0020150B4A2.880e-538.10NACHT, LRR and PYD domains-containing protein 3-li... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 27..54
e-value: 0.85
score: 17.6
coord: 55..82
e-value: 0.0025
score: 27.0
NoneNo IPR availablePANTHERPTHR24107FAMILY NOT NAMEDcoord: 14..97
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 12..92
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 7..99
e-value: 1.0E-17
score: 65.7
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 28..49
e-value: 1.3
score: 9.2
coord: 55..74
e-value: 0.24
score: 11.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig824contigE_fasciculatus_S2_contig824:25127..26352 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig824.16389.1mRNA_E_fasciculatus_S2_contig824.16389.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig824 25127..26354 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig824.16389.1 ID=prot_E_fasciculatus_S2_contig824.16389.1|Name=mRNA_E_fasciculatus_S2_contig824.16389.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=99bp
CGVTSGGRGRRSLAGLRSLALTLKAAPPRLVVLDLGHNFIDDSAIEVIAT
GLEENRVLTNLILQGNGIGEKGMTILAAALPSSIVELDLSNNPAVGEKG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf