prot_E_fasciculatus_S2_contig811.16267.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig811.16267.1
Unique Nameprot_E_fasciculatus_S2_contig811.16267.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length578
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig811.16267.1 vs. uniprot
Match: A0A6H5KZ19_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZ19_9PHAE)

HSP 1 Score: 1071 bits (2771), Expect = 0.000e+0
Identity = 544/577 (94.28%), Postives = 556/577 (96.36%), Query Frame = 0 
Query:    1 MESPLAEVASPPVEEPPAGEPEEAHGDAWSCPICFMWFDMPVSPPCQHTFCAGCLKSVVRAAAHRQRRSGNTGPXXXXXXLCREPFTPEVVQPSARIFEEMLKATVTCPNGDCTAQFCPLRWKKHQEECPSAVVQCMHHLVGCDWKGARRDLSLHVEGCAYEKIKGLVPRVSASLKQIHTQVHQLEARVMAQNAAVANTRALLAHQRRAGSVFPAVYALLWRPPNWRLYQSPRPGGGVLSNVTLICLAPILFLALWGAGVFGGGGGLVLEERAVCLVGVAILGFVALLEHDNESPYHELQTPSLLKGLAIGEFLLEGTARLMVYFALKGLPDWKRTPALLFLLAPLFYPTVVQAVHRFEVQVKNAHNQAQRARAQPPLPPVEPVAVKTHGTVVNGVVRGTAMLLMSPVPTLVGEVLAKLGVFVVSAALGPEKLDAFLEHVWMAMSAGIALDDKARLKRRHDSIFRDLKTPPPNMMDRTTRRLIAAVCVCLFATIVAFFRDILHMVGYSRLLLSVLNSAHFRWELHVGRVVMESLQQTRTNQDSNFARNRARDLFRSRLLLLWVVVGSSFFLLFMLTS 577
            MESPLAEVASPPVEE PA E  +AHGDAWSCP+CFMWFDMPV PPCQHTFCAGCLKSVVRAAAHRQRRSGNTGPXXXXXXLCREPFTPEVVQPSARIFEEMLKATVTC NGDC AQFCPLRWKKHQEECPSAVVQCMHHLVGC W+GARRDLSLHVEGCAYEKIKGL+PRVSASLKQIHTQVHQLEARVMAQNAAVANTRALLAHQR+AGSVFPAVYALLWRPPNWRLYQSPRPGGGVLSNVTLICLAPILFLAL GAGVFGGGGGLV+EERAVCLVGVAILGFVALLEHDNESPYHELQTPSLLKGLAIGEFLLEGTAR MVYFALKGLPDWKRTPALLFLLAPLFYPTVVQAVHRFEVQVKNAHNQAQRARAQPPLPPVEPVAVKTHGTVVNGVVRGT MLLM+PVP LVGEVLAKLGVFVVSAALGPEKLDAFLEHVW+ MS+GIALDDKARLK+RHDSIFRDL+TP PNM DRTTRRLIAAVCVCLFA IVAFFRDIL MVGYSRLLLSVL+SAHFRWELHVGRVVM SLQQTRTNQD NFAR RARDL RSRLLLLWVVVGSSFFLLFMLTS
Sbjct:    1 MESPLAEVASPPVEEAPAEESGDAHGDAWSCPVCFMWFDMPVFPPCQHTFCAGCLKSVVRAAAHRQRRSGNTGPXXXXXXLCREPFTPEVVQPSARIFEEMLKATVTCRNGDCAAQFCPLRWKKHQEECPSAVVQCMHHLVGCVWEGARRDLSLHVEGCAYEKIKGLIPRVSASLKQIHTQVHQLEARVMAQNAAVANTRALLAHQRQAGSVFPAVYALLWRPPNWRLYQSPRPGGGVLSNVTLICLAPILFLALCGAGVFGGGGGLVVEERAVCLVGVAILGFVALLEHDNESPYHELQTPSLLKGLAIGEFLLEGTARSMVYFALKGLPDWKRTPALLFLLAPLFYPTVVQAVHRFEVQVKNAHNQAQRARAQPPLPPVEPVAVKTHGTVVNGVVRGTTMLLMNPVPALVGEVLAKLGVFVVSAALGPEKLDAFLEHVWLVMSSGIALDDKARLKKRHDSIFRDLRTPLPNMTDRTTRRLIAAVCVCLFAIIVAFFRDILQMVGYSRLLLSVLDSAHFRWELHVGRVVMGSLQQTRTNQDPNFARTRARDLLRSRLLLLWVVVGSSFFLLFMLTS 577
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig811.16267.1 vs. uniprot
Match: UPI001425A99E (ligand of Numb protein X 2-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425A99E)

HSP 1 Score: 71.2 bits (173), Expect = 2.690e-9
Identity = 49/163 (30.06%), Postives = 72/163 (44.17%), Query Frame = 0 
Query:   23 EAHGDAWSCPICFMWFDMPVSPPCQHTFCAGCLKSVVRAAAHRQRRSGNTGPXXXXXXLCREPFTPEVVQPSARIFEEML-KATVTCPNGDCTAQFCPLRWKKHQEE------CPSAVVQCMHHLVGCDWKGARRDLSLHVEGCAYEKIKGLVPRVSASLKQI 178
            EA  +  +C IC      P    C HT+CA C++SV+R   HRQ              + R P T +  +PS+ I + ML K  V CPN      +C    ++   E      C   +  C+H   GC ++G+R  L  H+  C + K KG+V   +  L  I
Sbjct:   35 EAVDEDLTCHICLQPLVNPTDTTCGHTYCAKCIRSVLRV--HRQ------------CPVDRSPLTAQDCRPSSLIIKRMLDKLPVVCPN----TTYCDDAMQRSDLEAHLANRCKGNMSHCIHAAHGCTFRGSRTALESHIRECPHAKQKGVVAIKTGGLTTI 179
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig811.16267.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KZ19_9PHAE0.000e+094.28RING-type domain-containing protein n=2 Tax=Ectoca... [more]
UPI001425A99E2.690e-930.06ligand of Numb protein X 2-like n=1 Tax=Anneissia ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 355..375
NoneNo IPR availablePANTHERPTHR10131:SF129TNF RECEPTOR-ASSOCIATED FACTOR 6coord: 27..164
NoneNo IPR availablePANTHERPTHR10131TNF RECEPTOR ASSOCIATED FACTORcoord: 27..164
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 482..502
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 238..261
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..237
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 503..557
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 577..577
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 308..327
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 328..338
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 339..356
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 289..307
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 273..288
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 357..481
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 262..272
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 558..576
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 27..95
NoneNo IPR availableTMHMMTMhelixcoord: 482..499
NoneNo IPR availableTMHMMTMhelixcoord: 553..575
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 31..82
e-value: 1.2E-7
score: 41.4
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 31..83
score: 11.28
IPR027370RING-type zinc-finger, LisH dimerisation motifPFAMPF13445zf-RING_UBOXcoord: 31..60
e-value: 1.9E-9
score: 37.4
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 20..104
e-value: 8.0E-15
score: 56.4
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 105..170
e-value: 5.2E-5
score: 25.4
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 46..55
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 125..164
score: 8.638
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 104..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig811contigE_fasciculatus_S2_contig811:1519..5129 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig811.16267.1mRNA_E_fasciculatus_S2_contig811.16267.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig811 795..5129 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig811.16267.1 ID=prot_E_fasciculatus_S2_contig811.16267.1|Name=mRNA_E_fasciculatus_S2_contig811.16267.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=578bp
MESPLAEVASPPVEEPPAGEPEEAHGDAWSCPICFMWFDMPVSPPCQHTF
CAGCLKSVVRAAAHRQRRSGNTGPSGPACPLCREPFTPEVVQPSARIFEE
MLKATVTCPNGDCTAQFCPLRWKKHQEECPSAVVQCMHHLVGCDWKGARR
DLSLHVEGCAYEKIKGLVPRVSASLKQIHTQVHQLEARVMAQNAAVANTR
ALLAHQRRAGSVFPAVYALLWRPPNWRLYQSPRPGGGVLSNVTLICLAPI
LFLALWGAGVFGGGGGLVLEERAVCLVGVAILGFVALLEHDNESPYHELQ
TPSLLKGLAIGEFLLEGTARLMVYFALKGLPDWKRTPALLFLLAPLFYPT
VVQAVHRFEVQVKNAHNQAQRARAQPPLPPVEPVAVKTHGTVVNGVVRGT
AMLLMSPVPTLVGEVLAKLGVFVVSAALGPEKLDAFLEHVWMAMSAGIAL
DDKARLKRRHDSIFRDLKTPPPNMMDRTTRRLIAAVCVCLFATIVAFFRD
ILHMVGYSRLLLSVLNSAHFRWELHVGRVVMESLQQTRTNQDSNFARNRA
RDLFRSRLLLLWVVVGSSFFLLFMLTS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008974TRAF-like
IPR001293Znf_TRAF
IPR017907Znf_RING_CS
IPR013083Znf_RING/FYVE/PHD
IPR027370Znf-RING_LisH
IPR001841Znf_RING