prot_E_fasciculatus_S2_contig8100.16262.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8100.16262.1
Unique Nameprot_E_fasciculatus_S2_contig8100.16262.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length236
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8100.16262.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 157..184
e-value: 0.43
score: 19.6
coord: 129..156
e-value: 3.5
score: 13.3
coord: 186..213
e-value: 120.0
score: 2.5
NoneNo IPR availablePANTHERPTHR24114:SF30LEUCINE-RICH REPEAT-CONTAINING PROTEIN 74Acoord: 44..140
coord: 118..234
NoneNo IPR availablePANTHERPTHR24114FAMILY NOT NAMEDcoord: 44..140
coord: 118..234
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 106..234
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 71..236
e-value: 6.9E-23
score: 82.9
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 157..173
e-value: 0.021
score: 14.9
coord: 220..234
e-value: 0.78
score: 10.0
coord: 129..150
e-value: 0.13
score: 12.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8100contigE_fasciculatus_S2_contig8100:3122..6679 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8100.16262.1mRNA_E_fasciculatus_S2_contig8100.16262.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8100 3122..6679 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8100.16262.1 ID=prot_E_fasciculatus_S2_contig8100.16262.1|Name=mRNA_E_fasciculatus_S2_contig8100.16262.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=236bp
MSISSTYSTLSSEHHGRHDDSDITDGYMSDRNFVLTDDKWAATRIDSETK
SDEYERKRENDVQYHQNQPTGKDDYTGEKLCVMLPACTRLGIAPSSHILS
RLPSSRLSVRHGLLNPASAAALSAGLLGNRCIRSLNLGSNLLRDDSARPL
LEAIFGNPSLTKLDLSRNSLSDDFGVLIAQSLSSPLCALKEVVLAENLFS
DGFVEALSKGMRELEEVHGNSPLKNLDISNNKISSR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf