prot_E_fasciculatus_S2_contig8076.16231.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8076.16231.1
Unique Nameprot_E_fasciculatus_S2_contig8076.16231.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length44
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig8076.16231.1 vs. uniprot
Match: D7FM06_ECTSI (Similar to SET domain, bifurcated 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM06_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 1.360e-23
Identity = 42/43 (97.67%), Postives = 42/43 (97.67%), Query Frame = 0 
Query:    1 MYCRMCGDGGELTSCDERQAHTRRPCPFSFCLACIERNFGYEH 43
            MYCRMCGDGGELTSCDERQA TRRPCPFSFCLACIERNFGYEH
Sbjct:   85 MYCRMCGDGGELTSCDERQAGTRRPCPFSFCLACIERNFGYEH 127
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BLAST of mRNA_E_fasciculatus_S2_contig8076.16231.1 vs. uniprot
Match: A0A7S2W8F3_9STRA (DNA helicase (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W8F3_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 4.430e-8
Identity = 24/44 (54.55%), Postives = 26/44 (59.09%), Query Frame = 0 
Query:    1 MYCRMCGDGGELTSCDERQAHTRRPCPFSFCLACIERNFGYEHV 44
            +YCR CGDGG+L  CD         C FSFC  CI RNFG E V
Sbjct:   88 IYCRWCGDGGDLNLCDT--------CKFSFCSGCITRNFGVEGV 123
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BLAST of mRNA_E_fasciculatus_S2_contig8076.16231.1 vs. uniprot
Match: A0A7S4D4Y2_HETAK (DNA helicase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4Y2_HETAK)

HSP 1 Score: 54.7 bits (130), Expect = 1.790e-7
Identity = 23/44 (52.27%), Postives = 26/44 (59.09%), Query Frame = 0 
Query:    1 MYCRMCGDGGELTSCDERQAHTRRPCPFSFCLACIERNFGYEHV 44
            MYCR CGDGG++  CD         CP  FC AC+ERNFG   V
Sbjct:  249 MYCRWCGDGGDIFPCDR--------CPKGFCRACVERNFGPREV 284
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8076.16231.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FM06_ECTSI1.360e-2397.67Similar to SET domain, bifurcated 1 n=1 Tax=Ectoca... [more]
A0A7S2W8F3_9STRA4.430e-854.55DNA helicase (Fragment) n=1 Tax=Rhizochromulina ma... [more]
A0A7S4D4Y2_HETAK1.790e-752.27DNA helicase (Fragment) n=1 Tax=Heterosigma akashi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..43
e-value: 1.3E-5
score: 27.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8076contigE_fasciculatus_S2_contig8076:155..286 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8076.16231.1mRNA_E_fasciculatus_S2_contig8076.16231.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8076 155..298 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8076.16231.1 ID=prot_E_fasciculatus_S2_contig8076.16231.1|Name=mRNA_E_fasciculatus_S2_contig8076.16231.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=44bp
MYCRMCGDGGELTSCDERQAHTRRPCPFSFCLACIERNFGYEHV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD