prot_E_fasciculatus_S2_contig804.16201.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig804.16201.1
Unique Name	prot_E_fasciculatus_S2_contig804.16201.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	254

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig804.16201.1 vs. uniprot
Match: D7FJ10_ECTSI (VPS37 C-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ10_ECTSI)

HSP 1 Score: 407 bits (1045), Expect = 4.640e-140
Identity = 223/285 (78.25%), Postives = 231/285 (81.05%), Query Frame = 0

Query:    1 MQVVGHPDLHGWDGTNPPLIGDIVAAVIQEFGRSNGGVTTPGRDQTSTSWAGPISQPRSG---------FSAPPVIHP----------------------RTTSEEQPKKTRP-VHHTPIPDIPDAFSELQGLSTEKLTRLLGDESARQALLLGMTNVVRMKDLRTDVRKGNVETARLTLAKQDAASVLRKEGEKIKEELKALQASYEDKAHGGGKNMGGTADQMILKRVKHASKMADTSSERVATDFLEKRVPAQEFLEEFLKERQRYHMLAAKIECMKRDIRF 253
            MQVVGHPDLHGWDGTNPPLIGDIVAAVIQEFGRSNGGVTT GR Q ST W GPI+Q  SG            PPV +P                      RT  E Q ++ RP VHHTPIPDIPD F ELQGLSTEKL RLLGDESARQALLLGMTNVVRMKDLRTDVRKGNVETARLTLAKQDAASVLR+EGEKIK ELKALQ SYEDKAHGGGKNMGGTADQMILKRVKHASKMADTSSE+VATDFLEKRVP Q+FL+EFLKERQRYHMLAAKIECMKRDIRF
Sbjct:   91 MQVVGHPDLHGWDGTNPPLIGDIVAAVIQEFGRSNGGVTTSGRVQASTVWGGPIAQEPSGTPPAVGAFGLGNPPVSYPAGRATGGAASAKGKAHMTSTDPRTGGEVQTRRMRPPVHHTPIPDIPDTFGELQGLSTEKLNRLLGDESARQALLLGMTNVVRMKDLRTDVRKGNVETARLTLAKQDAASVLREEGEKIKAELKALQTSYEDKAHGGGKNMGGTADQMILKRVKHASKMADTSSEQVATDFLEKRVPTQDFLDEFLKERQRYHMLAAKIECMKRDIRF 375

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BLAST of mRNA_E_fasciculatus_S2_contig804.16201.1 vs. uniprot
Match: UPI001EB06E8A (vacuolar protein sorting-associated protein 37A-like n=4 Tax=Haliotis TaxID=6452 RepID=UPI001EB06E8A)

HSP 1 Score: 65.5 bits (158), Expect = 1.160e-8
Identity = 72/283 (25.44%), Postives = 120/283 (42.40%), Query Frame = 0

Query:    1 MQVVGHPDLHGWDGTNPPLIGDIVAAVIQEF------------GRSNGGVTTP------------GRDQTSTSWAGPISQP----RSGFSAPPVIHPRTTSEEQPKKTRPVHHTPIPDIPDAFSELQGLSTEKLTRLLGDESARQALLLGMTNVVRMKDLRTDVRKGNVETARLTLAKQDAASVLRKEGEKIKEELKALQASYEDKAHGGGKNMGGTADQM----ILKRVKHASKMADTSSERVATDFLEKRVPAQEFLEEFLKERQRYHMLAAKIECMKRDI 251
            M+VVG P+++ +   +   +G  +  +++EF            G+  G    P            G  Q      GP   P     +G   PP++  + T+   P         P+PDI  A+ EL+     +L  L+ +E     LL G+  + R    R D+    V+ AR  L KQ     L+    K   EL A++  +E        +    +DQ     I   +K A   A+  SE++A DFL+K++  +EFL+ ++++R   HM  AK E + + I
Sbjct:   89 MKVVGCPNINNFSMHSD--LGVAIQTIVEEFKKTPPRILPHLVGQQFGAPQPPVAPVSGPGYPLYGNPQALYPLVGPPPLPPRAVENGREGPPILSDQDTNASSPAY-------PVPDIMKAYPELKDKGLFELQELVDNEEKVLDLLQGLPELARFTQDREDISAQCVQLARENLTKQPVVEELKDSVLKKMSELDAIKGEFETHCE----HHLTLSDQFHPANIQTNLKVAVMEAEEESEKIADDFLDKKIDIEEFLQTYMQKRTLCHMRKAKEEKLNQII 358

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig804.16201.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig804.16201.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FJ10_ECTSI	4.640e-140	78.25	VPS37 C-terminal domain-containing protein n=2 Tax...	[more]
UPI001EB06E8A	1.160e-8	25.44	vacuolar protein sorting-associated protein 37A-li...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 154..174
IPR009851	Modifier of rudimentary, Modr	PFAM	PF07200	Mod_r	coord: 100..243 e-value: 4.4E-24 score: 85.3
IPR009851	Modifier of rudimentary, Modr	PROSITE	PS51314	VPS37_C	coord: 172..253 score: 10.483
IPR037859	Vacuolar protein sorting-associated protein 37	PANTHER	PTHR13678	WILLIAMS-BEUREN SYNDROME CRITICAL REGION PROTEIN-RELATED	coord: 60..250

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig804	contig	E_fasciculatus_S2_contig804:3388..4659 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig804.16201.1	mRNA_E_fasciculatus_S2_contig804.16201.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig804 3337..5298 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig804.16201.1 ID=prot_E_fasciculatus_S2_contig804.16201.1|Name=mRNA_E_fasciculatus_S2_contig804.16201.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=254bp
MQVVGHPDLHGWDGTNPPLIGDIVAAVIQEFGRSNGGVTTPGRDQTSTSW
AGPISQPRSGFSAPPVIHPRTTSEEQPKKTRPVHHTPIPDIPDAFSELQG
LSTEKLTRLLGDESARQALLLGMTNVVRMKDLRTDVRKGNVETARLTLAK
QDAASVLRKEGEKIKEELKALQASYEDKAHGGGKNMGGTADQMILKRVKH
ASKMADTSSERVATDFLEKRVPAQEFLEEFLKERQRYHMLAAKIECMKRD
IRF*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR037859	Vps37
IPR009851	Mod_r