prot_E_fasciculatus_S2_contig80.16158.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig80.16158.1
Unique Name	prot_E_fasciculatus_S2_contig80.16158.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	151

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig80.16158.1 vs. uniprot
Match: D8LT41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT41_ECTSI)

HSP 1 Score: 286 bits (733), Expect = 1.470e-92
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0

Query:    1 ANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVAPGKIEGSAPAAGGNGGMGMG 138
            ANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVAPGKIEGSAPAAGGNGGMGMG
Sbjct:   94 ANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVAPGKIEGSAPAAGGNGGMGMG 231

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BLAST of mRNA_E_fasciculatus_S2_contig80.16158.1 vs. uniprot
Match: A0A6H5KI11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI11_9PHAE)

HSP 1 Score: 281 bits (719), Expect = 4.130e-92
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0

Query:    1 ANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVAPGKIEGSAPAAGGNGGM 135
            ANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVAPGKIEGSAPAAGGNGGM
Sbjct:   94 ANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVAPGKIEGSAPAAGGNGGM 228

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BLAST of mRNA_E_fasciculatus_S2_contig80.16158.1 vs. uniprot
Match: A0A835YPU5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPU5_9STRA)

HSP 1 Score: 205 bits (522), Expect = 7.470e-62
Identity = 94/124 (75.81%), Postives = 109/124 (87.90%), Query Frame = 0

Query:    1 ANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVAPGKIEG 124
            A DVGANLFIGQLDP+VDEK+LYDTFSAFGFIT TPKVMRDP+TG SKGYGFVSYDGFEASD AIECM+ Q+LCNRQI VQYA+K+D+ GERHG  AERLLA+NNP + K HT+F+   G+++G
Sbjct:   94 AQDVGANLFIGQLDPEVDEKLLYDTFSAFGFITNTPKVMRDPETGASKGYGFVSYDGFEASDLAIECMNGQFLCNRQIVVQYAFKRDSHGERHGSLAERLLAANNPLRLKPHTMFASQEGEVQG 217

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BLAST of mRNA_E_fasciculatus_S2_contig80.16158.1 vs. uniprot
Match: A0A6G0WNH8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WNH8_9STRA)

HSP 1 Score: 193 bits (490), Expect = 3.250e-59
Identity = 96/146 (65.75%), Postives = 112/146 (76.71%), Query Frame = 0

Query:    3 DVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVAPGKIEGSAPAAGGNGGMGMGGAPPLPPPPV 148
            D+GANLF+G LDPDVDEK+LYDTFSAFG I +TPK+MRDPDT +S+G+GFVSYD FEA+D AIECM+ QYLCNRQI VQYAYKK +  ERHG QAERLLAS+NP+K K HT F+ +   I    P A G   M M     +PPPPV
Sbjct:   99 DIGANLFLGNLDPDVDEKLLYDTFSAFGGIVETPKIMRDPDTKVSRGFGFVSYDSFEAADLAIECMNAQYLCNRQIVVQYAYKKGSNNERHGSQAERLLASSNPNKMKPHTRFAFSTPAIPQPPPMAMGMQPMMMAPVGMMPPPPV 244

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BLAST of mRNA_E_fasciculatus_S2_contig80.16158.1 vs. uniprot
Match: A0A0W8D7L6_PHYNI (Splicing factor 3B subunit 4 n=11 Tax=Peronosporaceae TaxID=4777 RepID=A0A0W8D7L6_PHYNI)

HSP 1 Score: 190 bits (482), Expect = 7.100e-58
Identity = 86/122 (70.49%), Postives = 100/122 (81.97%), Query Frame = 0

Query:    3 DVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVAPGKIEG 124
            DVGANLFIG LDP+VDEK+LYDTFSAFG I +TPK+MRDPDT  SKG+GFVS+D FEA+D AIECMH QYLCNRQ+ VQYA+KKD+  ERHG +AERLLA  NP+K K HT+F+   G   G
Sbjct:   96 DVGANLFIGNLDPEVDEKLLYDTFSAFGGIVETPKIMRDPDTKASKGFGFVSFDSFEAADLAIECMHGQYLCNRQVVVQYAFKKDSHNERHGSEAERLLAQRNPNKLKPHTMFAFTAGAAPG 217

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BLAST of mRNA_E_fasciculatus_S2_contig80.16158.1 vs. uniprot
Match: F0YAQ8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAQ8_AURAN)

HSP 1 Score: 192 bits (488), Expect = 8.280e-58
Identity = 88/127 (69.29%), Postives = 103/127 (81.10%), Query Frame = 0

Query:    3 DVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVAPGKIEGSAPAA 129
            +VGANLF+G LD DVDEK+LYDTFSAFG IT+TPK+MRDPDTG SKG+GFVSYD FEASD AIECMHNQ+LCN+Q+ V YA+K+D++ ERHG QAERLLA+NNP   K H +F   PG   G   AA
Sbjct:   97 EVGANLFVGGLDVDVDEKLLYDTFSAFGTITETPKIMRDPDTGNSKGFGFVSYDSFEASDLAIECMHNQFLCNKQVQVGYAFKRDSKTERHGSQAERLLAANNPMSAKPHAMFGTGPGDAMGGGYAA 223

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BLAST of mRNA_E_fasciculatus_S2_contig80.16158.1 vs. uniprot
Match: A0A2H5NRF6_CITUN (Uncharacterized protein n=1 Tax=Citrus unshiu TaxID=55188 RepID=A0A2H5NRF6_CITUN)

HSP 1 Score: 190 bits (483), Expect = 8.950e-58
Identity = 95/149 (63.76%), Postives = 112/149 (75.17%), Query Frame = 0

Query:    3 DVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPS--KFKVHTLFSVAPGKIEGSAPAAGGNGGMGMGGAPPLPPPPVS 149
            DVGANLFIG LDPDVDEK+LYDTFSAFG I   PK+MRDPDTG S+G+GF+SYD FEASD AIE M+ QYLCNRQI+V YAYKKDT+GERHG  AER+LA+NNPS  K + HTLF+  P  ++ +    G  GG       P+PP P +
Sbjct:  109 DVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQVNGTVGG-------PVPPRPYA 250

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BLAST of mRNA_E_fasciculatus_S2_contig80.16158.1 vs. uniprot
Match: W4GDM5_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces TaxID=100860 RepID=W4GDM5_9STRA)

HSP 1 Score: 190 bits (482), Expect = 2.230e-57
Identity = 87/116 (75.00%), Postives = 100/116 (86.21%), Query Frame = 0

Query:    3 DVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVA 118
            D+GANLF+G LDPDVDEK+LYDTFSAFG I +TPK+MRDPDT MS+G+GFVSYD FEA+D AIECM+ QYLCNRQI VQYAYKK +  ERHG QAERLLAS+NP+K K HT F+ A
Sbjct:   98 DIGANLFLGNLDPDVDEKLLYDTFSAFGGIVETPKIMRDPDTKMSRGFGFVSYDSFEAADLAIECMNTQYLCNRQIVVQYAYKKGSNNERHGSQAERLLASSNPNKLKPHTRFAFA 213

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BLAST of mRNA_E_fasciculatus_S2_contig80.16158.1 vs. uniprot
Match: A0A067GIM3_CITSI (Uncharacterized protein n=4 Tax=Citrus TaxID=2706 RepID=A0A067GIM3_CITSI)

HSP 1 Score: 192 bits (487), Expect = 2.360e-57
Identity = 96/149 (64.43%), Postives = 113/149 (75.84%), Query Frame = 0

Query:    3 DVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPS--KFKVHTLFSVAPGKIEGSAPAAGGNGGMGMGGAPPLPPPPVS 149
            DVGANLFIG LDPDVDEK+LYDTFSAFG I   PK+MRDPDTG S+G+GF+SYD FEASD AIE M+ QYLCNRQI+V YAYKKDT+GERHG  AER+LA+NNPS  K + HTLF+  P  ++ +  A G  GG       P+PP P +
Sbjct:  109 DVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGG-------PVPPRPYA 250

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BLAST of mRNA_E_fasciculatus_S2_contig80.16158.1 vs. uniprot
Match: A0A6A4C3Q0_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4C3Q0_9STRA)

HSP 1 Score: 187 bits (475), Expect = 6.230e-57
Identity = 83/118 (70.34%), Postives = 100/118 (84.75%), Query Frame = 0

Query:    3 DVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVAPG 120
            DVGANLF+G LDP+VDEK+LYDTFSAFG I +TPKVMRDPD+  S+G+GFVS+D FEA+D AIECMH QYLCNRQ+ VQ+A+KKD+R ERHG +AERLLA  NP K + HT+F+  PG
Sbjct:   96 DVGANLFLGNLDPEVDEKLLYDTFSAFGGIVETPKVMRDPDSQASRGFGFVSFDSFEAADLAIECMHGQYLCNRQVVVQFAFKKDSRNERHGSEAERLLAQRNPDKLQPHTMFAFTPG 213

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig80.16158.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig80.16158.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LT41_ECTSI	1.470e-92	100.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KI11_9PHAE	4.130e-92	100.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835YPU5_9STRA	7.470e-62	75.81	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A6G0WNH8_9STRA	3.250e-59	65.75	Uncharacterized protein n=1 Tax=Aphanomyces euteic...	[more]
A0A0W8D7L6_PHYNI	7.100e-58	70.49	Splicing factor 3B subunit 4 n=11 Tax=Peronosporac...	[more]
F0YAQ8_AURAN	8.280e-58	69.29	Uncharacterized protein n=1 Tax=Aureococcus anopha...	[more]
A0A2H5NRF6_CITUN	8.950e-58	63.76	Uncharacterized protein n=1 Tax=Citrus unshiu TaxI...	[more]
W4GDM5_9STRA	2.230e-57	75.00	Uncharacterized protein n=6 Tax=Aphanomyces TaxID=...	[more]
A0A067GIM3_CITSI	2.360e-57	64.43	Uncharacterized protein n=4 Tax=Citrus TaxID=2706 ...	[more]
A0A6A4C3Q0_9STRA	6.230e-57	70.34	Uncharacterized protein n=3 Tax=Phytophthora TaxID...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 7..81 e-value: 1.4E-21 score: 87.7
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 8..78 e-value: 1.3E-17 score: 63.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 6..85 score: 15.733
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..100 e-value: 9.7E-24 score: 85.8
None	No IPR available	PANTHER	PTHR15241:SF183	SPLICING FACTOR 3B SUBUNIT 4	coord: 7..149
None	No IPR available	PANTHER	PTHR15241	TRANSFORMER-2-RELATED	coord: 7..149
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 6..99

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig80	contig	E_fasciculatus_S2_contig80:539..2507 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig80.16158.1	mRNA_E_fasciculatus_S2_contig80.16158.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig80 539..2507 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig80.16158.1 ID=prot_E_fasciculatus_S2_contig80.16158.1|Name=mRNA_E_fasciculatus_S2_contig80.16158.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=151bp
ANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGY
GFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERL
LASNNPSKFKVHTLFSVAPGKIEGSAPAAGGNGGMGMGGAPPLPPPPVSM
*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR035979	RBD_domain_sf
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR000504	RRM_dom