prot_E_fasciculatus_S2_contig7990.16143.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig7990.16143.1
Unique Name	prot_E_fasciculatus_S2_contig7990.16143.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	469

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig7990.16143.1 vs. uniprot
Match: A0A6H5LG27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LG27_9PHAE)

HSP 1 Score: 731 bits (1887), Expect = 3.690e-242
Identity = 397/479 (82.88%), Postives = 410/479 (85.59%), Query Frame = 0

Query:    8 DRESLDQVRDLGFHVMVTANSKGLLWTQQGAGLAATLGSEVVAVDRMDDDECKLLLQRCSMIETVDWAALRDTEPVKSIIKLCRYGPHALVMVGTTLQGQGRSFSWDATRDSLARTVDSSRSLLQNGATQDPDYVSLYSA-----------------GKVCTLKLPDHIRNRYLHLAILPKHVPAPEQMLESLWDTESDEVFDEVLEKLRSHALLQPVVILGDQGRSGHVTSNTQMDFILHTAAGETVEHAAARMSLYLGRLKVLKSGLGRKAGGKYLAMGRCGLVSCWAEVEKRFGFTALEAYTDSIRAYREKAVASGQGSSLKLAAAVKLLADYLFLTNEKTSAMEYYKEALARVEARTEHDRAKPQTQSFSAQVLKGISRCLVSEGQLEDAEERFQKAMSMENTRNPGASRAMLEYCQILRQMGEFDRASAIGGQALALVQTGPTGPHSAESAVCVASLAGLAAQQGKPTLSEELY 469
            DRESLDQVRDLGFHVMVTANSKGLLWTQQGAGLAATLGSEVVAVDRMD+DECKLLLQRCSMIE  DWAALRDTE  + I        H  + V       GR  S  A    L           +  + +D   V+L  A                 G +CTLKLPDHIRNRYLHLAILPKHVPAPEQMLESLWDTESDEVFDEVLEKLRSHALLQPVVILGDQGRSGHVTSNTQMD+ILHTAAGETVEHAAARMSLYLGRLKVLKSGLGRKAGGKYLAMGRCGLVSCWAEVEKRFGFTALEAYTDSIRAYREKAVASGQGSSLKLAAAVKLLADYLFLTNEKTSAM+YYKEALARVEARTEHDRAKPQTQSFSAQVLKGI+RCLV+EGQLE+AEERFQKAMSMENTRNPGASRAMLEYCQILRQMGEFDRASAIGGQALALVQTGPTGPHSAESAVCVASLAGLAAQQGKP LSEELY
Sbjct: 1168 DRESLDQVRDLGFHVMVTANSKGLLWTQQGAGLAATLGSEVVAVDRMDEDECKLLLQRCSMIEMADWAALRDTEVPREI-------DHQALSVRAACSRDGRDDSSGAGALVLVGCD-------ERFSHKDRGIVALLVAKWRFSGPGLRVPVQRWEGTLCTLKLPDHIRNRYLHLAILPKHVPAPEQMLESLWDTESDEVFDEVLEKLRSHALLQPVVILGDQGRSGHVTSNTQMDYILHTAAGETVEHAAARMSLYLGRLKVLKSGLGRKAGGKYLAMGRCGLVSCWAEVEKRFGFTALEAYTDSIRAYREKAVASGQGSSLKLAAAVKLLADYLFLTNEKTSAMDYYKEALARVEARTEHDRAKPQTQSFSAQVLKGIARCLVAEGQLEEAEERFQKAMSMENTRNPGASRAMLEYCQILRQMGEFDRASAIGGQALALVQTGPTGPHSAESAVCVASLAGLAAQQGKPALSEELY 1632

[Close]

BLAST of mRNA_E_fasciculatus_S2_contig7990.16143.1 vs. uniprot
Match: D8LRB0_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRB0_ECTSI)

HSP 1 Score: 585 bits (1508), Expect = 1.560e-191
Identity = 297/307 (96.74%), Postives = 301/307 (98.05%), Query Frame = 0

Query:    8 DRESLDQVRDLGFHVMVTANSKGLLWTQQGAGLAATLGSEVVAVDRMDDDECKLLLQRCSMIETVDWAALRDTEPVKSIIKLCRYGPHALVMVGTTLQGQGRSFSWDATRDSLARTVDSSRSLLQNGATQDPDYVSLYSAGKVCTLKLPDHIRNRYLHLAILPKHVPAPEQMLESLWDTESDEVFDEVLEKLRSHALLQPVVILGDQGRSGHVTSNTQMDFILHTAAGETVEHAAARMSLYLGRLKVLKSGLGRKAGGKYLAMGRCGLVSCWAEVEKRFGFTALEAYTDSIRAYREKAVASGQGSSL 314
            DRESLDQVRDLGFHVMVTANSKGLLWTQQGAGLAATLGSEVVAVDRMDDDECKLLLQRCSMIETVDWAALRDTEPVKSIIKLCRYGPHALVMVGTTLQGQGRSFSWDATRDSLARTVDSSRSLLQNGA+QDPDYVSLYSAGKVCTLKLPDHIRNRYLHLAILPKHVPAPEQMLESLWDTESDEVFDEVLEKLRSHALLQPVVILGDQGRSGHVTSNTQMD+ILHTAAGETVEHAAARMSLYLGRLKVLKSGLGRKAGGKYLAMGRCGLVSCWAEVEKRFGFTALEAYTDSIRAYR     SG+ +SL
Sbjct:  696 DRESLDQVRDLGFHVMVTANSKGLLWTQQGAGLAATLGSEVVAVDRMDDDECKLLLQRCSMIETVDWAALRDTEPVKSIIKLCRYGPHALVMVGTTLQGQGRSFSWDATRDSLARTVDSSRSLLQNGASQDPDYVSLYSAGKVCTLKLPDHIRNRYLHLAILPKHVPAPEQMLESLWDTESDEVFDEVLEKLRSHALLQPVVILGDQGRSGHVTSNTQMDYILHTAAGETVEHAAARMSLYLGRLKVLKSGLGRKAGGKYLAMGRCGLVSCWAEVEKRFGFTALEAYTDSIRAYRS----SGKWASL 998

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig7990.16143.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig7990.16143.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5LG27_9PHAE	3.690e-242	82.88	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LRB0_ECTSI	1.560e-191	96.74	NB-ARC and TPR repeat-containig protein n=1 Tax=Ec...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 265..469 e-value: 1.0E-13 score: 52.9
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 315..433
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 146..231 e-value: 1.0E-7 score: 34.0
None	No IPR available	PFAM	PF14559	TPR_19	coord: 375..425 e-value: 9.9E-6 score: 26.0
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 365..398 score: 8.26
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 317..350 score: 5.694
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 365..436 score: 8.924
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 10..166

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig7990	contig	E_fasciculatus_S2_contig7990:529..6708 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig7990.16143.1	mRNA_E_fasciculatus_S2_contig7990.16143.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig7990 528..6708 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig7990.16143.1 ID=prot_E_fasciculatus_S2_contig7990.16143.1|Name=mRNA_E_fasciculatus_S2_contig7990.16143.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=469bp
LFVSFFRDRESLDQVRDLGFHVMVTANSKGLLWTQQGAGLAATLGSEVVA
VDRMDDDECKLLLQRCSMIETVDWAALRDTEPVKSIIKLCRYGPHALVMV
GTTLQGQGRSFSWDATRDSLARTVDSSRSLLQNGATQDPDYVSLYSAGKV
CTLKLPDHIRNRYLHLAILPKHVPAPEQMLESLWDTESDEVFDEVLEKLR
SHALLQPVVILGDQGRSGHVTSNTQMDFILHTAAGETVEHAAARMSLYLG
RLKVLKSGLGRKAGGKYLAMGRCGLVSCWAEVEKRFGFTALEAYTDSIRA
YREKAVASGQGSSLKLAAAVKLLADYLFLTNEKTSAMEYYKEALARVEAR
TEHDRAKPQTQSFSAQVLKGISRCLVSEGQLEDAEERFQKAMSMENTRNP
GASRAMLEYCQILRQMGEFDRASAIGGQALALVQTGPTGPHSAESAVCVA
SLAGLAAQQGKPTLSEELY

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR013026	TPR-contain_dom
IPR019734	TPR_repeat
IPR036388	WH-like_DNA-bd_sf
IPR011990	TPR-like_helical_dom_sf