prot_E_fasciculatus_S2_contig7962.16117.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7962.16117.1
Unique Nameprot_E_fasciculatus_S2_contig7962.16117.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length101
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7962.16117.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003368Polymorphic outer membrane protein repeatPFAMPF02415Chlam_PMPcoord: 65..80
e-value: 0.011
score: 16.2
IPR003368Polymorphic outer membrane protein repeatTIGRFAMTIGR01376TIGR01376coord: 64..79
e-value: 6.7E-4
score: 17.4
coord: 1..15
e-value: 0.0023
score: 15.7
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 2..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7962contigE_fasciculatus_S2_contig7962:1800..2102 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7962.16117.1mRNA_E_fasciculatus_S2_contig7962.16117.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7962 1800..2102 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7962.16117.1 ID=prot_E_fasciculatus_S2_contig7962.16117.1|Name=mRNA_E_fasciculatus_S2_contig7962.16117.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=101bp
SFTGNYAGENGGAIAIYRSYNSSIIGATFKSNQATDYGGAVWMTSADEQD
DDQVLVLSSAALFGELVFENNTAGSDGGALWLDRHAAYDELWNSSFGKNR
A
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence
IPR003368POMP_repeat