prot_E_fasciculatus_S2_contig7957.16113.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7957.16113.1
Unique Nameprot_E_fasciculatus_S2_contig7957.16113.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length231
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7957.16113.1 vs. uniprot
Match: D7FWH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWH1_ECTSI)

HSP 1 Score: 422 bits (1086), Expect = 7.590e-149
Identity = 223/229 (97.38%), Postives = 225/229 (98.25%), Query Frame = 0 
Query:    4 VPAGVRHRAGAATSTAGRGPPPSTPASRARHDQP--RKVFLVYWAVCFATAITWLFAVAAASDDAWLQFEGYPLLKLGERCEFSASFCDYYKTGTAFQFFAAIVISATVVVMIVAAFKPAPATGRLGAAAGTMLLVFSVLQLAAFSIMAASAGRLNRDNDNYFQIKAGPTIGVAVIAWVFGLAGGSAILFLRPHATPGQDGPLRRFSRREGVRSAPRPRAPTSPSGVTI 230
            VPAGVRHRAGAA STAGRGPPPSTPASRAR+DQP  RKVFLVYWAVCFATAITWLFAVAAASDDAWLQFEGYPLLKLGERCEFSASFCDYYKTGTAFQFFAAIVISATVVVMIVAAFKPAPATGRLGAAAGTMLLVFSVLQLAAFSIMAASAGRLNRDNDNYFQIKAGPTIGVAVIAWVFGLAGGSAIL LRPHATPGQDGPLRRFSRREGVRSAPRPRAP+SPSGVTI
Sbjct:    7 VPAGVRHRAGAAPSTAGRGPPPSTPASRARNDQPKQRKVFLVYWAVCFATAITWLFAVAAASDDAWLQFEGYPLLKLGERCEFSASFCDYYKTGTAFQFFAAIVISATVVVMIVAAFKPAPATGRLGAAAGTMLLVFSVLQLAAFSIMAASAGRLNRDNDNYFQIKAGPTIGVAVIAWVFGLAGGSAILLLRPHATPGQDGPLRRFSRREGVRSAPRPRAPSSPSGVTI 235
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7957.16113.1 vs. uniprot
Match: A0A6H5JD07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD07_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 3.000e-24
Identity = 59/109 (54.13%), Postives = 73/109 (66.97%), Query Frame = 0 
Query:   44 YWAVCFATAI-TWLFAVAAASDDAWLQFEGYPLLKLGERCEFSASFCDYYKTGTAFQFFAAIVISATVVVMIVAAFKPAPATGRLGAAAGTMLLVFSVLQLAAFSIMAA 151
            YW V F T I TW+FAVAAA+DDAW+  + Y    LGE C+    FC  YK  TAFQ+ A IV+S  +V+++VAAF PAP TG+LG A G ML VF+V +L AF   AA
Sbjct:    9 YWIVLFVTTIFTWIFAVAAAADDAWIA-DAYEA-GLGESCD-GYDFCGLYKAATAFQYLATIVVSVVLVMVVVAAFTPAPVTGKLGLAVGIMLFVFAVFELLAFCTYAA 114
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7957.16113.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FWH1_ECTSI7.590e-14997.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JD07_9PHAE3.000e-2454.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 172..192
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..62
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 119..129
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 193..230
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 153..171
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 63..96
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..40
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 130..152
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 97..118
NoneNo IPR availableTMHMMTMhelixcoord: 131..153
NoneNo IPR availableTMHMMTMhelixcoord: 96..118
NoneNo IPR availableTMHMMTMhelixcoord: 40..62
NoneNo IPR availableTMHMMTMhelixcoord: 168..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7957contigE_fasciculatus_S2_contig7957:1681..5345 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7957.16113.1mRNA_E_fasciculatus_S2_contig7957.16113.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7957 473..5810 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7957.16113.1 ID=prot_E_fasciculatus_S2_contig7957.16113.1|Name=mRNA_E_fasciculatus_S2_contig7957.16113.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=231bp
MSSVPAGVRHRAGAATSTAGRGPPPSTPASRARHDQPRKVFLVYWAVCFA
TAITWLFAVAAASDDAWLQFEGYPLLKLGERCEFSASFCDYYKTGTAFQF
FAAIVISATVVVMIVAAFKPAPATGRLGAAAGTMLLVFSVLQLAAFSIMA
ASAGRLNRDNDNYFQIKAGPTIGVAVIAWVFGLAGGSAILFLRPHATPGQ
DGPLRRFSRREGVRSAPRPRAPTSPSGVTI*
back to top